Wall clock time and date at job start Mon Mar 8 2021 02:20:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37871 * 126.45939 * 2 1 4 4 C 1.46680 * 126.23099 * 359.96463 * 3 2 1 5 5 O 1.21693 * 119.99780 * 0.02562 * 4 3 2 6 6 N 1.34776 * 119.99613 * 180.02562 * 4 3 2 7 7 C 1.46505 * 119.99597 * 180.02562 * 6 4 3 8 8 H 1.09000 * 112.85296 * 23.80222 * 7 6 4 9 9 C 1.53781 * 113.61334 * 154.99978 * 7 6 4 10 10 C 1.53786 * 87.17350 * 89.07333 * 9 7 6 11 11 H 1.09000 * 113.60973 * 270.92699 * 10 9 7 12 12 C 1.50690 * 113.61518 * 140.02616 * 10 9 7 13 13 C 1.38207 * 120.00440 * 119.99887 * 12 10 9 14 14 C 1.38254 * 120.00231 * 179.97438 * 13 12 10 15 15 C 1.50709 * 120.00106 * 179.97438 * 14 13 12 16 16 F 1.39894 * 109.47144 * 89.99795 * 15 14 13 17 17 F 1.39895 * 109.47028 * 210.00303 * 15 14 13 18 18 F 1.39904 * 109.46744 * 330.00215 * 15 14 13 19 19 C 1.38215 * 120.00055 * 359.97438 * 14 13 12 20 20 C 1.38255 * 119.99868 * 359.97145 * 19 14 13 21 21 C 1.38207 * 119.99872 * 359.81542 * 20 19 14 22 22 C 1.53781 * 113.61146 * 252.49455 * 7 6 4 23 23 N 1.37649 * 107.53239 * 180.23321 * 3 2 1 24 24 C 1.35536 * 108.64394 * 359.56338 * 23 3 2 25 25 C 1.50700 * 125.56218 * 180.20782 * 24 23 3 26 26 O 1.42900 * 109.47142 * 65.29691 * 25 24 23 27 27 Si 1.86300 * 109.47030 * 185.29671 * 25 24 23 28 28 C 1.35454 * 108.87062 * 0.44133 * 24 23 3 29 29 H 1.08998 * 109.47220 * 89.99513 * 1 2 3 30 30 H 1.09004 * 109.46768 * 210.00214 * 1 2 3 31 31 H 1.09005 * 109.46689 * 329.99585 * 1 2 3 32 32 H 0.96995 * 120.00232 * 359.97438 * 6 4 3 33 33 H 1.09002 * 113.61445 * 203.66333 * 9 7 6 34 34 H 1.09002 * 113.61408 * 334.48063 * 9 7 6 35 35 H 1.08003 * 119.99837 * 359.97438 * 13 12 10 36 36 H 1.08006 * 119.99809 * 179.97438 * 19 14 13 37 37 H 1.08004 * 119.99827 * 179.97438 * 20 19 14 38 38 H 1.08007 * 119.99863 * 180.22842 * 21 20 19 39 39 H 1.09005 * 113.61471 * 25.43638 * 22 7 6 40 40 H 1.08996 * 113.61178 * 156.24980 * 22 7 6 41 41 H 0.97003 * 125.67372 * 179.70686 * 23 3 2 42 42 H 1.08999 * 109.47053 * 305.29694 * 25 24 23 43 43 H 0.96705 * 114.00207 * 59.99819 * 26 25 24 44 44 H 1.48498 * 110.00040 * 58.67941 * 27 25 24 45 45 H 1.48500 * 109.99809 * 180.02562 * 27 25 24 46 46 H 1.07999 * 126.06254 * 179.68935 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3264 1.1089 0.0000 4 6 1.8899 2.5092 -0.0007 5 8 0.7027 2.7765 -0.0009 6 7 2.8038 3.4998 -0.0012 7 6 2.3679 4.8985 -0.0013 8 1 1.3647 5.0293 0.4043 9 6 3.4040 5.8667 0.5937 10 6 3.9876 5.9927 -0.8235 11 1 4.7539 5.2507 -1.0477 12 6 4.4068 7.3953 -1.1812 13 6 5.7224 7.6604 -1.5112 14 6 6.1069 8.9472 -1.8399 15 6 7.5416 9.2364 -2.1992 16 9 7.7171 9.0821 -3.5785 17 9 7.8587 10.5487 -1.8326 18 9 8.3809 8.3466 -1.5200 19 6 5.1754 9.9683 -1.8389 20 6 3.8590 9.7028 -1.5098 21 6 3.4739 8.4157 -1.1856 22 6 2.5890 5.6124 -1.3453 23 7 3.6284 0.6624 -0.0053 24 6 3.6218 -0.6929 0.0012 25 6 4.8434 -1.5754 0.0028 26 8 5.5618 -1.3920 1.2244 27 14 4.3222 -3.3575 -0.1496 28 6 2.3379 -1.1248 0.0008 29 1 -0.3633 0.0001 -1.0276 30 1 -0.3633 -0.8900 0.5139 31 1 -0.3633 0.8900 0.5139 32 1 3.7501 3.2867 -0.0006 33 1 2.9700 6.7926 0.9712 34 1 4.0828 5.3965 1.3052 35 1 6.4502 6.8625 -1.5124 36 1 5.4758 10.9735 -2.0953 37 1 3.1313 10.5008 -1.5087 38 1 2.4448 8.2077 -0.9321 39 1 2.6107 4.9366 -2.2003 40 1 1.9312 6.4679 -1.4986 41 1 4.4191 1.2243 -0.0106 42 1 5.4838 -1.3109 -0.8385 43 1 5.0519 -1.6090 2.0170 44 1 3.5467 -3.5547 -1.4006 45 1 5.5179 -4.2382 -0.1486 46 1 2.0136 -2.1549 0.0004 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705318_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:20:49 Heat of formation + Delta-G solvation = -123.311717 kcal Electronic energy + Delta-G solvation = -34017.876107 eV Core-core repulsion = 28846.332600 eV Total energy + Delta-G solvation = -5171.543506 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.134 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -51.13468 -48.65399 -48.59525 -42.65360 -41.66155 -40.27810 -38.91301 -37.81305 -34.97609 -33.49693 -32.97802 -32.38859 -31.46024 -28.19746 -27.38425 -27.20702 -26.86489 -26.04625 -23.58406 -23.23164 -22.42725 -21.64240 -20.69769 -20.32158 -19.60972 -19.46538 -19.33573 -19.06798 -18.16304 -17.50726 -17.23882 -16.82700 -16.54200 -16.34103 -16.25639 -15.90221 -15.51494 -15.49392 -15.38091 -15.18047 -15.11197 -15.01670 -14.90217 -14.75089 -14.68198 -14.58701 -14.41541 -14.29913 -13.94516 -13.86703 -13.64151 -13.59327 -13.49789 -13.36760 -13.09169 -12.93709 -12.54090 -12.20566 -12.11395 -12.04761 -11.96983 -11.47367 -11.05437 -10.76253 -10.37865 -10.26483 -9.97131 -9.85351 -9.20224 -5.08854 -0.22683 0.05599 0.31941 1.08381 1.49311 1.61003 1.64132 1.80825 1.90341 2.11604 2.26160 2.30774 2.68948 2.97749 3.19535 3.25226 3.38968 3.44056 3.47949 3.48616 3.61117 3.69244 3.75658 3.83262 3.87603 4.02890 4.11797 4.13913 4.20842 4.31976 4.42339 4.44690 4.50345 4.63007 4.67959 4.71267 4.72565 4.79856 4.81652 4.88603 5.00128 5.00830 5.12499 5.19038 5.24504 5.36144 5.44456 5.58130 5.61883 5.87039 6.18725 6.33985 6.37066 7.07899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.062 4.062 3 C -0.058 4.058 4 C 0.594 3.406 5 O -0.518 6.518 6 N -0.717 5.717 7 C 0.122 3.878 8 H 0.111 0.889 9 C -0.135 4.135 10 C -0.076 4.076 11 H 0.099 0.901 12 C -0.072 4.072 13 C -0.068 4.068 14 C -0.179 4.179 15 C 0.508 3.492 16 F -0.176 7.176 17 F -0.176 7.176 18 F -0.177 7.177 19 C -0.074 4.074 20 C -0.115 4.115 21 C -0.084 4.084 22 C -0.143 4.143 23 N -0.525 5.525 24 C 0.027 3.973 25 C -0.055 4.055 26 O -0.543 6.543 27 Si 0.720 3.280 28 C -0.200 4.200 29 H 0.069 0.931 30 H 0.066 0.934 31 H 0.081 0.919 32 H 0.394 0.606 33 H 0.101 0.899 34 H 0.078 0.922 35 H 0.134 0.866 36 H 0.137 0.863 37 H 0.137 0.863 38 H 0.135 0.865 39 H 0.077 0.923 40 H 0.098 0.902 41 H 0.416 0.584 42 H 0.114 0.886 43 H 0.384 0.616 44 H -0.253 1.253 45 H -0.253 1.253 46 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.307 -1.420 2.460 3.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.070 4.070 3 C -0.171 4.171 4 C 0.383 3.617 5 O -0.394 6.394 6 N -0.368 5.368 7 C 0.017 3.983 8 H 0.129 0.871 9 C -0.173 4.173 10 C -0.094 4.094 11 H 0.117 0.883 12 C -0.072 4.072 13 C -0.086 4.086 14 C -0.181 4.181 15 C 0.453 3.547 16 F -0.157 7.157 17 F -0.157 7.157 18 F -0.158 7.158 19 C -0.092 4.092 20 C -0.133 4.133 21 C -0.102 4.102 22 C -0.182 4.182 23 N -0.121 5.121 24 C -0.091 4.091 25 C -0.166 4.166 26 O -0.348 6.348 27 Si 0.620 3.380 28 C -0.225 4.225 29 H 0.088 0.912 30 H 0.085 0.915 31 H 0.100 0.900 32 H 0.228 0.772 33 H 0.120 0.880 34 H 0.097 0.903 35 H 0.152 0.848 36 H 0.154 0.846 37 H 0.155 0.845 38 H 0.152 0.848 39 H 0.095 0.905 40 H 0.116 0.884 41 H 0.253 0.747 42 H 0.132 0.868 43 H 0.232 0.768 44 H -0.177 1.177 45 H -0.178 1.178 46 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -1.509 -1.625 1.562 2.712 hybrid contribution 1.611 0.984 -0.461 1.943 sum 0.102 -0.642 1.101 1.279 Atomic orbital electron populations 1.20405 0.88793 1.03326 1.02570 1.19949 0.96068 0.90314 1.00691 1.20191 0.83580 0.93409 1.19912 1.17013 0.85812 0.82911 0.75999 1.90844 1.15843 1.83086 1.49596 1.45563 1.09196 1.05616 1.76417 1.21839 0.99887 0.79630 0.96944 0.87123 1.23448 0.97978 1.00109 0.95789 1.21673 0.97603 0.93020 0.97088 0.88317 1.19640 0.92649 0.95471 0.99424 1.20832 0.96470 0.95056 0.96249 1.19978 0.91935 0.96748 1.09405 1.18317 0.87318 0.74255 0.74771 1.93241 1.96188 1.95292 1.30998 1.93204 1.94018 1.37097 1.91410 1.93201 1.74170 1.68501 1.79970 1.21012 0.92946 0.98694 0.96541 1.21196 0.95603 0.97257 0.99232 1.21302 0.99900 0.92314 0.96697 1.23635 0.95542 1.00980 0.98043 1.41858 1.07103 1.06606 1.56553 1.21116 0.96892 0.83283 1.07811 1.24956 0.92109 1.09235 0.90266 1.86504 1.42009 1.91144 1.15187 0.94008 0.82800 0.73340 0.87859 1.20610 0.90770 0.99091 1.11980 0.91246 0.91480 0.89992 0.77199 0.88027 0.90317 0.84814 0.84561 0.84483 0.84770 0.90472 0.88354 0.74693 0.86833 0.76827 1.17679 1.17786 0.83132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.11 9.83 36.01 0.35 0.24 16 2 C -0.06 -0.10 6.21 -104.16 -0.65 -0.74 16 3 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 4 C 0.59 1.02 7.79 -12.85 -0.10 0.92 16 5 O -0.52 -2.56 14.40 5.20 0.07 -2.48 16 6 N -0.72 1.07 5.26 -54.32 -0.29 0.79 16 7 C 0.12 -0.22 4.32 -67.11 -0.29 -0.51 16 8 H 0.11 -0.04 7.46 -51.93 -0.39 -0.42 16 9 C -0.14 0.45 7.29 -25.92 -0.19 0.26 16 10 C -0.08 0.23 3.87 -90.82 -0.35 -0.12 16 11 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 12 C -0.07 0.12 5.29 -104.63 -0.55 -0.44 16 13 C -0.07 0.04 9.06 -39.59 -0.36 -0.32 16 14 C -0.18 -0.08 5.45 -104.62 -0.57 -0.65 16 15 C 0.51 0.79 3.36 36.01 0.12 0.91 16 16 F -0.18 -0.44 17.30 2.25 0.04 -0.41 16 17 F -0.18 -0.37 16.46 2.25 0.04 -0.33 16 18 F -0.18 -0.36 16.46 2.25 0.04 -0.32 16 19 C -0.07 0.04 9.40 -39.58 -0.37 -0.33 16 20 C -0.12 0.20 10.05 -39.59 -0.40 -0.19 16 21 C -0.08 0.18 8.63 -39.58 -0.34 -0.16 16 22 C -0.14 0.34 7.26 -25.78 -0.19 0.15 16 23 N -0.52 0.60 5.99 -5.69 -0.03 0.57 16 24 C 0.03 -0.02 6.46 -81.95 -0.53 -0.55 16 25 C -0.06 0.11 3.08 36.01 0.11 0.22 16 26 O -0.54 0.88 12.88 -35.23 -0.45 0.42 16 27 Si 0.72 -1.72 30.56 -169.99 -5.19 -6.92 16 28 C -0.20 0.03 9.27 -39.98 -0.37 -0.34 16 29 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.08 0.22 6.49 -51.93 -0.34 -0.11 16 32 H 0.39 -1.51 7.83 -40.82 -0.32 -1.83 16 33 H 0.10 -0.37 7.73 -51.93 -0.40 -0.77 16 34 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 35 H 0.13 -0.21 7.60 -52.48 -0.40 -0.61 16 36 H 0.14 -0.22 7.60 -52.48 -0.40 -0.62 16 37 H 0.14 -0.51 8.06 -52.48 -0.42 -0.94 16 38 H 0.13 -0.52 6.65 -52.48 -0.35 -0.87 16 39 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.10 -0.29 6.31 -51.93 -0.33 -0.62 16 41 H 0.42 -1.44 8.19 -40.82 -0.33 -1.78 16 42 H 0.11 -0.21 7.96 -51.93 -0.41 -0.62 16 43 H 0.38 -1.94 8.70 45.56 0.40 -1.54 16 44 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 45 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 46 H 0.15 -0.33 6.19 -52.49 -0.32 -0.66 16 LS Contribution 394.65 15.07 5.95 5.95 Total: 0.00 -8.26 394.65 -10.41 -18.67 By element: Atomic # 1 Polarization: -8.30 SS G_CDS: -5.33 Total: -13.63 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -5.25 Total: -2.32 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -0.32 Total: 1.36 kcal Atomic # 8 Polarization: -1.68 SS G_CDS: -0.38 Total: -2.06 kcal Atomic # 9 Polarization: -1.17 SS G_CDS: 0.11 Total: -1.06 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.19 Total: -6.92 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -8.26 -10.41 -18.67 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.638 kcal (2) G-P(sol) polarization free energy of solvation -8.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.312 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds