Wall clock time and date at job start Mon Mar 8 2021 02:20:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.46973 * 2 1 4 4 C 1.50693 * 109.47235 * 119.99773 * 2 1 3 5 5 C 1.30767 * 118.29238 * 249.97820 * 4 2 1 6 6 N 1.38931 * 121.74983 * 179.68800 * 5 4 2 7 7 C 1.47027 * 118.88383 * 13.28821 * 6 5 4 8 8 C 1.50705 * 109.81938 * 196.79157 * 7 6 5 9 9 O 1.21279 * 119.99848 * 18.20479 * 8 7 6 10 10 N 1.34774 * 119.99676 * 198.20431 * 8 7 6 11 11 C 1.46501 * 119.99594 * 180.02562 * 10 8 7 12 12 H 1.08996 * 112.85274 * 25.33786 * 11 10 8 13 13 C 1.53788 * 113.61200 * 156.52840 * 11 10 8 14 14 C 1.53779 * 87.08093 * 89.11608 * 13 11 10 15 15 H 1.09001 * 113.61579 * 270.88501 * 14 13 11 16 16 C 1.50697 * 113.61768 * 140.06449 * 14 13 11 17 17 C 1.38214 * 120.00063 * 300.00282 * 16 14 13 18 18 C 1.38257 * 120.00299 * 179.97438 * 17 16 14 19 19 C 1.38214 * 119.99750 * 359.97438 * 18 17 16 20 20 C 1.38255 * 120.00152 * 359.95271 * 19 18 17 21 21 C 1.50703 * 120.00246 * 180.02562 * 20 19 18 22 22 F 1.39905 * 109.46829 * 0.02562 * 21 20 19 23 23 F 1.39899 * 109.47141 * 120.00243 * 21 20 19 24 24 F 1.39900 * 109.47450 * 240.00756 * 21 20 19 25 25 C 1.38215 * 120.00097 * 359.86314 * 20 19 18 26 26 C 1.53778 * 113.61411 * 254.13237 * 11 10 8 27 27 C 1.53546 * 107.65446 * 316.33024 * 7 6 5 28 28 C 1.50208 * 118.54770 * 70.00389 * 4 2 1 29 29 H 0.96700 * 114.00521 * 60.00144 * 1 2 3 30 30 H 1.08996 * 109.46956 * 240.00218 * 2 1 3 31 31 H 1.48501 * 109.99891 * 60.00151 * 3 2 1 32 32 H 1.48497 * 110.00102 * 181.32010 * 3 2 1 33 33 H 1.07996 * 119.17862 * 359.65725 * 5 4 2 34 34 H 0.97003 * 120.55768 * 193.25190 * 6 5 4 35 35 H 1.08994 * 109.82541 * 75.86761 * 7 6 5 36 36 H 0.97001 * 120.00545 * 359.97438 * 10 8 7 37 37 H 1.09004 * 113.61413 * 203.66549 * 13 11 10 38 38 H 1.09002 * 113.61599 * 334.48463 * 13 11 10 39 39 H 1.08003 * 119.99738 * 359.97438 * 17 16 14 40 40 H 1.07998 * 120.00065 * 179.97438 * 18 17 16 41 41 H 1.07993 * 119.99755 * 179.97438 * 19 18 17 42 42 H 1.07998 * 120.00046 * 180.20838 * 25 20 19 43 43 H 1.09006 * 113.61285 * 25.43792 * 26 11 10 44 44 H 1.09004 * 113.61380 * 156.33355 * 26 11 10 45 45 H 1.09001 * 109.61905 * 301.22575 * 27 7 6 46 46 H 1.09002 * 109.77376 * 180.77221 * 27 7 6 47 47 H 1.09002 * 109.33122 * 79.76671 * 28 4 2 48 48 H 1.08996 * 109.32461 * 320.11793 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 2.5096 0.0002 2.1636 6 7 2.9932 -0.5796 3.3298 7 6 3.1211 -2.0429 3.3953 8 6 3.2580 -2.4800 4.8311 9 8 2.9273 -1.7322 5.7268 10 7 3.7479 -3.7020 5.1196 11 6 3.8804 -4.1272 6.5153 12 1 3.1872 -3.6140 7.1817 13 6 3.8916 -5.6544 6.6955 14 6 5.4173 -5.5855 6.5160 15 1 5.7389 -5.6678 5.4777 16 6 6.1759 -6.5048 7.4381 17 6 6.0569 -6.3620 8.8077 18 6 6.7525 -7.2057 9.6538 19 6 7.5663 -8.1925 9.1300 20 6 7.6841 -8.3364 7.7600 21 6 8.5710 -9.4126 7.1888 22 9 9.1634 -10.1314 8.2328 23 9 7.8048 -10.2795 6.4023 24 9 9.5677 -8.8264 6.4014 25 6 6.9858 -7.4953 6.9142 26 6 5.3322 -4.1331 7.0222 27 6 1.8492 -2.6493 2.7854 28 6 1.7452 -2.1977 1.3269 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.5614 2.4679 1.2085 32 1 3.5345 1.7704 -0.0321 33 1 2.6149 1.0660 2.0246 34 1 3.2429 -0.0283 4.0879 35 1 3.9933 -2.3636 2.8258 36 1 4.0120 -4.3002 4.4032 37 1 3.5831 -5.9790 7.6893 38 1 3.3804 -6.1921 5.8970 39 1 5.4207 -5.5912 9.2170 40 1 6.6598 -7.0938 10.7240 41 1 8.1099 -8.8512 9.7909 42 1 7.0752 -7.6099 5.8440 43 1 5.9846 -3.4434 6.4865 44 1 5.4169 -4.0425 8.1052 45 1 0.9766 -2.3026 3.3390 46 1 1.9017 -3.7371 2.8290 47 1 2.5156 -2.6966 0.7389 48 1 0.7635 -2.4645 0.9357 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:20:56 Heat of formation + Delta-G solvation = -137.372109 kcal Electronic energy + Delta-G solvation = -34443.121449 eV Core-core repulsion = 29243.656760 eV Total energy + Delta-G solvation = -5199.464689 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.150 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -51.25001 -48.77890 -48.72051 -41.87177 -40.98888 -39.77506 -38.82099 -37.34642 -34.90891 -33.39466 -33.24508 -32.79410 -31.97191 -27.86450 -27.16945 -26.68474 -26.14803 -25.42065 -23.75049 -23.48163 -22.61904 -21.97617 -20.47949 -19.57636 -19.47167 -19.28258 -19.22376 -18.98314 -18.20306 -17.67006 -17.35015 -17.24417 -16.62696 -16.33897 -16.17587 -15.77589 -15.64555 -15.56573 -15.41021 -15.29974 -15.16564 -15.02662 -14.89301 -14.88356 -14.65844 -14.62875 -14.45615 -14.29538 -14.18587 -13.84200 -13.80080 -13.45822 -13.34078 -13.24587 -13.15200 -12.94318 -12.53599 -12.41823 -12.03564 -11.90823 -11.81482 -11.64549 -11.40968 -11.29841 -10.96070 -10.25796 -10.17828 -10.11070 -9.82469 -8.60988 -4.91892 -0.11233 0.20416 1.17601 1.32993 1.38367 1.59197 1.63771 1.77648 1.97487 2.40354 2.48321 2.65726 2.93696 3.33297 3.39968 3.44097 3.54854 3.60417 3.65132 3.67038 3.81589 3.89468 3.91786 3.99668 4.04943 4.07191 4.17212 4.21683 4.34745 4.36659 4.51225 4.56737 4.59914 4.62636 4.71838 4.73909 4.80825 4.87576 4.92229 4.97427 4.98950 5.09312 5.11607 5.14874 5.18874 5.29378 5.38729 5.47426 5.56773 5.75602 6.10767 6.36435 6.62057 7.02654 7.03322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.569 6.569 2 C -0.052 4.052 3 Si 0.749 3.251 4 C -0.241 4.241 5 C 0.116 3.884 6 N -0.741 5.741 7 C 0.138 3.862 8 C 0.517 3.483 9 O -0.574 6.574 10 N -0.692 5.692 11 C 0.114 3.886 12 H 0.086 0.914 13 C -0.123 4.123 14 C -0.067 4.067 15 H 0.114 0.886 16 C -0.073 4.073 17 C -0.086 4.086 18 C -0.118 4.118 19 C -0.088 4.088 20 C -0.194 4.194 21 C 0.506 3.494 22 F -0.182 7.182 23 F -0.182 7.182 24 F -0.183 7.183 25 C -0.075 4.075 26 C -0.141 4.141 27 C -0.121 4.121 28 C -0.053 4.053 29 H 0.397 0.603 30 H 0.084 0.916 31 H -0.304 1.304 32 H -0.291 1.291 33 H 0.116 0.884 34 H 0.404 0.596 35 H 0.116 0.884 36 H 0.419 0.581 37 H 0.105 0.895 38 H 0.091 0.909 39 H 0.151 0.849 40 H 0.155 0.845 41 H 0.142 0.858 42 H 0.141 0.859 43 H 0.067 0.933 44 H 0.101 0.899 45 H 0.050 0.950 46 H 0.109 0.891 47 H 0.087 0.913 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.802 -1.158 -3.414 3.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.378 6.378 2 C -0.164 4.164 3 Si 0.657 3.343 4 C -0.251 4.251 5 C -0.004 4.004 6 N -0.374 5.374 7 C 0.029 3.971 8 C 0.303 3.697 9 O -0.452 6.452 10 N -0.344 5.344 11 C 0.008 3.992 12 H 0.104 0.896 13 C -0.161 4.161 14 C -0.085 4.085 15 H 0.132 0.868 16 C -0.073 4.073 17 C -0.104 4.104 18 C -0.136 4.136 19 C -0.106 4.106 20 C -0.195 4.195 21 C 0.452 3.548 22 F -0.163 7.163 23 F -0.163 7.163 24 F -0.164 7.164 25 C -0.093 4.093 26 C -0.180 4.180 27 C -0.160 4.160 28 C -0.091 4.091 29 H 0.247 0.753 30 H 0.102 0.898 31 H -0.233 1.233 32 H -0.219 1.219 33 H 0.133 0.867 34 H 0.240 0.760 35 H 0.133 0.867 36 H 0.257 0.743 37 H 0.123 0.877 38 H 0.110 0.890 39 H 0.169 0.831 40 H 0.173 0.827 41 H 0.160 0.840 42 H 0.159 0.841 43 H 0.086 0.914 44 H 0.119 0.881 45 H 0.069 0.931 46 H 0.128 0.872 47 H 0.105 0.895 48 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.425 -0.532 -1.863 1.984 hybrid contribution 0.705 -0.525 0.345 0.945 sum 0.280 -1.057 -1.518 1.871 Atomic orbital electron populations 1.86455 1.18219 1.82139 1.51002 1.24492 0.85080 1.08914 0.97925 0.94634 0.77458 0.77288 0.84894 1.20394 1.08810 0.97577 0.98366 1.20223 0.96605 0.95883 0.87689 1.44323 1.72991 1.05132 1.15003 1.21165 1.01191 0.82355 0.92378 1.20767 0.75923 0.82038 0.90922 1.90725 1.50619 1.54355 1.49531 1.45479 1.64117 1.15986 1.08793 1.21880 0.97849 0.96673 0.82774 0.89606 1.23387 0.94510 0.93502 1.04667 1.21676 0.94806 0.92995 0.99004 0.86818 1.19799 0.97085 0.95910 0.94543 1.21575 0.97645 0.98422 0.92747 1.21468 0.95947 0.94380 1.01783 1.21243 0.97869 0.98446 0.93055 1.20004 1.03622 0.99599 0.96319 1.18508 0.78999 0.81628 0.75641 1.93162 1.85186 1.79958 1.58008 1.93212 1.75377 1.72100 1.75660 1.93212 1.63617 1.83989 1.75631 1.20955 0.94522 0.93531 1.00271 1.23616 0.96177 0.95760 1.02429 1.21848 0.95345 1.02054 0.96721 1.20037 1.02982 0.90757 0.95278 0.75293 0.89777 1.23313 1.21895 0.86713 0.75998 0.86705 0.74277 0.87699 0.89046 0.83124 0.82695 0.83996 0.84138 0.91388 0.88056 0.93094 0.87235 0.89463 0.90482 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -0.74 12.86 -148.98 -1.92 -2.65 16 2 C -0.05 -0.01 2.80 71.23 0.20 0.19 16 3 Si 0.75 -0.26 29.89 68.60 2.05 1.80 16 4 C -0.24 -0.95 5.39 -16.41 -0.09 -1.04 16 5 C 0.12 0.69 9.60 83.77 0.80 1.50 16 6 N -0.74 -3.55 5.47 -329.26 -1.80 -5.35 16 7 C 0.14 -0.08 3.36 44.33 0.15 0.07 16 8 C 0.52 0.82 7.10 87.66 0.62 1.44 16 9 O -0.57 -6.26 15.68 -3.03 -0.05 -6.31 16 10 N -0.69 3.78 5.26 -440.03 -2.32 1.46 16 11 C 0.11 -0.55 4.30 45.52 0.20 -0.35 16 12 H 0.09 0.01 7.50 -2.39 -0.02 -0.01 16 13 C -0.12 1.08 7.29 31.12 0.23 1.31 16 14 C -0.07 0.54 3.87 -10.92 -0.04 0.50 16 15 H 0.11 -1.18 8.10 -2.39 -0.02 -1.20 16 16 C -0.07 0.35 5.29 -19.87 -0.11 0.24 16 17 C -0.09 0.48 8.62 22.27 0.19 0.67 16 18 C -0.12 0.53 10.05 22.27 0.22 0.75 16 19 C -0.09 0.12 9.43 22.27 0.21 0.33 16 20 C -0.19 -0.13 5.37 -19.87 -0.11 -0.24 16 21 C 0.51 1.71 3.32 71.24 0.24 1.95 16 22 F -0.18 -0.82 15.97 44.97 0.72 -0.10 16 23 F -0.18 -0.86 17.23 44.97 0.78 -0.08 16 24 F -0.18 -0.92 17.24 44.97 0.78 -0.14 16 25 C -0.07 0.15 9.26 22.27 0.21 0.36 16 26 C -0.14 0.83 7.27 31.21 0.23 1.06 16 27 C -0.12 0.15 5.47 30.79 0.17 0.31 16 28 C -0.05 0.01 5.86 29.70 0.17 0.18 16 29 H 0.40 -3.51 8.74 -74.06 -0.65 -4.15 16 30 H 0.08 -0.32 7.96 -2.39 -0.02 -0.34 16 31 H -0.30 -2.39 6.89 99.48 0.68 -1.70 16 32 H -0.29 -1.47 7.11 99.48 0.71 -0.77 16 33 H 0.12 0.77 4.30 -2.91 -0.01 0.76 16 34 H 0.40 2.45 8.08 -92.71 -0.75 1.70 16 35 H 0.12 -0.62 8.14 -2.39 -0.02 -0.64 16 36 H 0.42 -4.93 8.70 -92.71 -0.81 -5.74 16 37 H 0.10 -0.96 7.72 -2.38 -0.02 -0.97 16 38 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 39 H 0.15 -1.42 6.67 -2.91 -0.02 -1.44 16 40 H 0.16 -1.36 8.06 -2.91 -0.02 -1.38 16 41 H 0.14 -0.40 7.16 -2.91 -0.02 -0.42 16 42 H 0.14 -0.62 8.06 -2.91 -0.02 -0.65 16 43 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 44 H 0.10 -0.68 6.33 -2.39 -0.02 -0.70 16 45 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 46 H 0.11 -0.80 8.14 -2.39 -0.02 -0.82 16 47 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 48 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 Total: 0.00 -22.51 401.60 0.60 -21.92 By element: Atomic # 1 Polarization: -18.62 SS G_CDS: -1.14 Total: -19.76 kcal Atomic # 6 Polarization: 5.73 SS G_CDS: 3.49 Total: 9.22 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -4.12 Total: -3.88 kcal Atomic # 8 Polarization: -7.00 SS G_CDS: -1.96 Total: -8.96 kcal Atomic # 9 Polarization: -2.59 SS G_CDS: 2.27 Total: -0.33 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: 2.05 Total: 1.80 kcal Total: -22.51 0.60 -21.92 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.453 kcal (2) G-P(sol) polarization free energy of solvation -22.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.595 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.920 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds