Wall clock time and date at job start Mon Mar 8 2021 02:22:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38248 * 119.93884 * 300.00146 * 4 2 1 6 6 C 1.38231 * 120.04449 * 179.97438 * 5 4 2 7 7 Br 1.89096 * 120.03749 * 180.02562 * 6 5 4 8 8 C 1.38792 * 119.92912 * 0.02562 * 6 5 4 9 9 O 1.35919 * 120.05839 * 179.97438 * 8 6 5 10 10 C 1.42901 * 116.99916 * 179.97438 * 9 8 6 11 11 C 1.50698 * 109.47237 * 180.02562 * 10 9 8 12 12 O 1.21276 * 119.99799 * 0.02562 * 11 10 9 13 13 N 1.34776 * 120.00246 * 180.02562 * 11 10 9 14 14 C 1.46499 * 120.00275 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84674 * 23.81142 * 14 13 11 16 16 C 1.53781 * 113.61248 * 154.99657 * 14 13 11 17 17 C 1.53783 * 87.07825 * 89.11963 * 16 14 13 18 18 H 1.08998 * 113.61763 * 270.88145 * 17 16 14 19 19 C 1.50704 * 113.61385 * 140.06025 * 17 16 14 20 20 C 1.38210 * 120.00190 * 300.00031 * 19 17 16 21 21 C 1.38253 * 119.99855 * 179.97438 * 20 19 17 22 22 C 1.38215 * 120.00481 * 359.97438 * 21 20 19 23 23 C 1.38261 * 119.99505 * 359.95313 * 22 21 20 24 24 C 1.50697 * 119.99661 * 180.02562 * 23 22 21 25 25 F 1.39894 * 109.47457 * 359.97438 * 24 23 22 26 26 F 1.39900 * 109.47320 * 120.00190 * 24 23 22 27 27 F 1.39901 * 109.47012 * 239.99819 * 24 23 22 28 28 C 1.38214 * 119.99983 * 359.85409 * 23 22 21 29 29 C 1.53771 * 113.61586 * 252.49794 * 14 13 11 30 30 C 1.38722 * 119.88374 * 359.97438 * 8 6 5 31 31 C 1.38150 * 119.94860 * 359.72388 * 30 8 6 32 32 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 33 33 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 34 34 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 35 35 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 36 36 H 1.08001 * 119.97763 * 359.97438 * 5 4 2 37 37 H 1.09002 * 109.47306 * 300.00607 * 10 9 8 38 38 H 1.09005 * 109.46915 * 60.00021 * 10 9 8 39 39 H 0.97007 * 119.99582 * 0.02562 * 13 11 10 40 40 H 1.09000 * 113.61354 * 203.66362 * 16 14 13 41 41 H 1.09001 * 113.61896 * 334.57266 * 16 14 13 42 42 H 1.07994 * 119.99818 * 359.97438 * 20 19 17 43 43 H 1.08001 * 119.99948 * 179.97438 * 21 20 19 44 44 H 1.07999 * 120.00703 * 179.97438 * 22 21 20 45 45 H 1.07997 * 119.99800 * 180.20694 * 28 23 22 46 46 H 1.09002 * 113.61455 * 25.43473 * 29 14 13 47 47 H 1.09004 * 113.61496 * 156.33392 * 29 14 13 48 48 H 1.07996 * 120.02544 * 180.02562 * 30 8 6 49 49 H 1.08000 * 119.95875 * 180.26927 * 31 30 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0340 -1.4480 6 6 2.0557 -2.6876 -2.5762 7 35 1.5970 -4.4978 -2.8739 8 6 2.8537 -2.0138 -3.4903 9 8 3.3070 -2.6540 -4.6002 10 6 4.1230 -1.8982 -5.4974 11 6 4.5278 -2.7663 -6.6607 12 8 4.1540 -3.9187 -6.7164 13 7 5.3053 -2.2621 -7.6394 14 6 5.6993 -3.1062 -8.7701 15 1 5.0126 -3.9358 -8.9385 16 6 6.0311 -2.3128 -10.0449 17 6 7.4774 -2.2384 -9.5277 18 1 7.6705 -1.3732 -8.8936 19 6 8.5143 -2.4161 -10.6068 20 6 8.5498 -3.5837 -11.3456 21 6 9.5007 -3.7464 -12.3359 22 6 10.4155 -2.7413 -12.5875 23 6 10.3790 -1.5728 -11.8495 24 6 11.3761 -0.4767 -12.1242 25 9 12.2290 -0.8711 -13.1606 26 9 10.6974 0.6887 -12.4962 27 9 12.1279 -0.2303 -10.9704 28 6 9.4259 -1.4085 -10.8622 29 6 7.1786 -3.5250 -8.7401 30 6 3.1878 -0.6857 -3.2690 31 6 2.7211 -0.0355 -2.1430 32 1 -0.3932 0.4418 0.7651 33 1 1.7924 -0.5139 0.8900 34 1 1.5615 2.4679 -1.2085 35 1 1.5881 2.4585 1.2242 36 1 0.9759 -2.5577 -0.7361 37 1 3.5608 -1.0392 -5.8637 38 1 5.0145 -1.5525 -4.9740 39 1 5.6047 -1.3405 -7.5947 40 1 5.9243 -2.8937 -10.9610 41 1 5.5357 -1.3432 -10.0972 42 1 7.8348 -4.3688 -11.1493 43 1 9.5287 -4.6589 -12.9129 44 1 11.1586 -2.8686 -13.3608 45 1 9.3953 -0.4943 -10.2879 46 1 7.6097 -3.5342 -7.7390 47 1 7.3856 -4.4374 -9.2994 48 1 3.8082 -0.1591 -3.9790 49 1 2.9775 0.9998 -1.9729 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:22:53 Heat of formation + Delta-G solvation = -155.163277 kcal Electronic energy + Delta-G solvation = -38690.635800 eV Core-core repulsion = 32796.410682 eV Total energy + Delta-G solvation = -5894.225118 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 486.049 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -51.22170 -48.75231 -48.68954 -41.81865 -41.38393 -40.43126 -39.29752 -38.64822 -37.38388 -34.77605 -33.63870 -32.85860 -32.22947 -31.95757 -30.50942 -29.56440 -27.14133 -26.63147 -26.49719 -25.97666 -24.05817 -23.45016 -22.66303 -22.25980 -21.79404 -20.40590 -19.56952 -19.54700 -19.41887 -18.97699 -18.61684 -18.32430 -17.50643 -17.41650 -17.29210 -16.90998 -16.76135 -16.35346 -16.05434 -15.76459 -15.66222 -15.61452 -15.57294 -15.46716 -15.20248 -15.13673 -14.97692 -14.85664 -14.73792 -14.63132 -14.48917 -14.22859 -14.14984 -14.01880 -13.87099 -13.75752 -13.52643 -13.41850 -13.21763 -12.90628 -12.61116 -12.38342 -12.27136 -12.11127 -11.87896 -11.84467 -11.81611 -11.74961 -11.25409 -11.20514 -10.99812 -10.50084 -10.21523 -10.11966 -9.95525 -9.78590 -9.30041 -4.90563 -0.07832 -0.04999 0.12885 0.24017 0.64067 1.32575 1.41345 1.46066 1.62276 1.64144 1.98685 2.37505 2.43825 2.51122 2.68883 2.96758 3.33397 3.36457 3.45664 3.49235 3.64883 3.65877 3.70610 3.81614 3.85669 3.89088 3.95514 4.04529 4.08608 4.11446 4.11534 4.11973 4.25763 4.30718 4.40307 4.50752 4.64007 4.65479 4.67510 4.79212 4.84782 4.86336 4.91383 4.97249 4.99471 5.05085 5.14472 5.18542 5.26168 5.33043 5.43032 5.48434 5.62431 5.79037 6.07229 6.46806 6.59401 7.16014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.088 4.088 3 Si 0.774 3.226 4 C -0.115 4.115 5 C -0.036 4.036 6 C -0.145 4.145 7 Br -0.053 7.053 8 C 0.149 3.851 9 O -0.305 6.305 10 C 0.031 3.969 11 C 0.515 3.485 12 O -0.567 6.567 13 N -0.692 5.692 14 C 0.115 3.885 15 H 0.084 0.916 16 C -0.124 4.124 17 C -0.066 4.066 18 H 0.118 0.882 19 C -0.073 4.073 20 C -0.087 4.087 21 C -0.119 4.119 22 C -0.089 4.089 23 C -0.194 4.194 24 C 0.506 3.494 25 F -0.183 7.183 26 F -0.182 7.182 27 F -0.183 7.183 28 C -0.073 4.073 29 C -0.142 4.142 30 C -0.188 4.188 31 C -0.057 4.057 32 H 0.395 0.605 33 H 0.094 0.906 34 H -0.290 1.290 35 H -0.291 1.291 36 H 0.136 0.864 37 H 0.130 0.870 38 H 0.135 0.865 39 H 0.422 0.578 40 H 0.102 0.898 41 H 0.091 0.909 42 H 0.150 0.850 43 H 0.154 0.846 44 H 0.141 0.859 45 H 0.143 0.857 46 H 0.071 0.929 47 H 0.099 0.901 48 H 0.183 0.817 49 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.386 5.823 0.971 6.805 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.195 4.195 3 Si 0.678 3.322 4 C -0.116 4.116 5 C -0.056 4.056 6 C -0.225 4.225 7 Br 0.032 6.968 8 C 0.101 3.899 9 O -0.217 6.217 10 C -0.047 4.047 11 C 0.301 3.699 12 O -0.445 6.445 13 N -0.347 5.347 14 C 0.010 3.990 15 H 0.102 0.898 16 C -0.162 4.162 17 C -0.084 4.084 18 H 0.136 0.864 19 C -0.073 4.073 20 C -0.105 4.105 21 C -0.137 4.137 22 C -0.107 4.107 23 C -0.196 4.196 24 C 0.452 3.548 25 F -0.164 7.164 26 F -0.164 7.164 27 F -0.164 7.164 28 C -0.091 4.091 29 C -0.181 4.181 30 C -0.207 4.207 31 C -0.075 4.075 32 H 0.246 0.754 33 H 0.112 0.888 34 H -0.217 1.217 35 H -0.218 1.218 36 H 0.154 0.846 37 H 0.148 0.852 38 H 0.153 0.847 39 H 0.260 0.740 40 H 0.120 0.880 41 H 0.110 0.890 42 H 0.168 0.832 43 H 0.171 0.829 44 H 0.159 0.841 45 H 0.161 0.839 46 H 0.089 0.911 47 H 0.117 0.883 48 H 0.200 0.800 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 2.823 4.656 0.195 5.448 hybrid contribution -0.714 0.618 0.470 1.055 sum 2.109 5.274 0.665 5.719 Atomic orbital electron populations 1.86553 1.18672 1.80786 1.51058 1.25090 0.84049 1.12343 0.98065 0.94224 0.89894 0.71280 0.76767 1.19434 1.01006 0.93445 0.97760 1.20870 0.96049 0.94417 0.94293 1.21256 1.08207 0.92992 1.00012 1.96747 1.92452 1.10824 1.96744 1.18776 0.93191 0.91755 0.86218 1.86245 1.64711 1.39748 1.30982 1.22884 0.97973 0.94335 0.89494 1.20486 0.78023 0.87552 0.83802 1.90792 1.55449 1.20174 1.78083 1.45326 1.51281 1.16449 1.21601 1.21843 0.96209 0.94565 0.86423 0.89824 1.23397 0.94165 1.01910 0.96691 1.21648 0.92285 0.99751 0.94684 0.86381 1.19814 0.96346 0.93525 0.97596 1.21576 0.97792 0.97363 0.93730 1.21454 0.94473 0.99461 0.98284 1.21236 0.99242 0.91959 0.98262 1.20005 0.99919 0.95753 1.03887 1.18507 0.80434 0.81974 0.73849 1.93159 1.72793 1.90665 1.59770 1.93212 1.79803 1.51760 1.91577 1.93212 1.78202 1.94958 1.50039 1.20963 0.92845 1.00015 0.95326 1.23576 0.95195 0.98127 1.01181 1.21549 1.05690 0.92081 1.01356 1.21215 0.94154 1.00331 0.91762 0.75409 0.88807 1.21697 1.21814 0.84572 0.85232 0.84736 0.73995 0.87962 0.89003 0.83215 0.82862 0.84100 0.83924 0.91050 0.88303 0.80015 0.81950 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.55 12.74 -148.98 -1.90 -2.45 16 2 C -0.09 0.23 2.81 71.24 0.20 0.43 16 3 Si 0.77 -4.30 29.78 68.60 2.04 -2.26 16 4 C -0.12 -0.03 5.42 -19.85 -0.11 -0.14 16 5 C -0.04 -0.16 9.35 22.27 0.21 0.05 16 6 C -0.14 -0.94 6.24 22.40 0.14 -0.81 16 7 Br -0.05 -0.52 33.16 -20.37 -0.68 -1.20 16 8 C 0.15 0.41 6.68 22.52 0.15 0.56 16 9 O -0.30 -1.33 9.00 -73.60 -0.66 -1.99 16 10 C 0.03 -0.18 5.22 71.24 0.37 0.19 16 11 C 0.52 -0.01 7.91 87.66 0.69 0.69 16 12 O -0.57 -7.03 16.10 16.02 0.26 -6.77 16 13 N -0.69 5.24 5.26 -440.06 -2.32 2.93 16 14 C 0.12 -0.64 4.32 45.51 0.20 -0.45 16 15 H 0.08 0.01 7.46 -2.39 -0.02 -0.01 16 16 C -0.12 1.19 7.29 31.12 0.23 1.42 16 17 C -0.07 0.62 3.85 -11.01 -0.04 0.57 16 18 H 0.12 -1.48 8.09 -2.39 -0.02 -1.50 16 19 C -0.07 0.41 5.29 -19.87 -0.11 0.30 16 20 C -0.09 0.51 8.61 22.27 0.19 0.71 16 21 C -0.12 0.56 10.05 22.27 0.22 0.78 16 22 C -0.09 0.15 9.43 22.27 0.21 0.36 16 23 C -0.19 0.00 5.37 -19.87 -0.11 -0.11 16 24 C 0.51 1.36 3.32 71.24 0.24 1.59 16 25 F -0.18 -0.74 15.97 44.97 0.72 -0.02 16 26 F -0.18 -0.72 17.23 44.97 0.78 0.06 16 27 F -0.18 -0.76 17.24 44.97 0.78 0.02 16 28 C -0.07 0.22 9.26 22.27 0.21 0.43 16 29 C -0.14 0.97 7.25 31.12 0.23 1.20 16 30 C -0.19 0.89 9.04 22.36 0.20 1.09 16 31 C -0.06 0.23 8.66 22.26 0.19 0.43 16 32 H 0.40 -2.72 8.74 -74.05 -0.65 -3.37 16 33 H 0.09 -0.56 7.96 -2.38 -0.02 -0.58 16 34 H -0.29 -0.15 7.11 99.48 0.71 0.56 16 35 H -0.29 0.11 7.11 99.48 0.71 0.81 16 36 H 0.14 0.58 8.06 -2.91 -0.02 0.55 16 37 H 0.13 -1.65 7.66 -2.39 -0.02 -1.67 16 38 H 0.14 -1.82 7.66 -2.38 -0.02 -1.84 16 39 H 0.42 -6.48 8.70 -92.70 -0.81 -7.28 16 40 H 0.10 -0.96 7.72 -2.39 -0.02 -0.98 16 41 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 42 H 0.15 -1.43 6.66 -2.91 -0.02 -1.45 16 43 H 0.15 -1.34 8.06 -2.91 -0.02 -1.36 16 44 H 0.14 -0.43 7.16 -2.91 -0.02 -0.45 16 45 H 0.14 -0.84 8.06 -2.91 -0.02 -0.86 16 46 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 47 H 0.10 -0.70 6.32 -2.38 -0.02 -0.72 16 48 H 0.18 -2.49 6.30 -2.91 -0.02 -2.51 16 49 H 0.16 -1.61 4.87 -2.91 -0.01 -1.62 16 Total: 0.00 -30.31 441.87 2.18 -28.12 By element: Atomic # 1 Polarization: -25.38 SS G_CDS: -0.35 Total: -25.73 kcal Atomic # 6 Polarization: 5.79 SS G_CDS: 3.51 Total: 9.30 kcal Atomic # 7 Polarization: 5.24 SS G_CDS: -2.32 Total: 2.93 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -2.30 Total: -11.22 kcal Atomic # 9 Polarization: -2.22 SS G_CDS: 2.27 Total: 0.05 kcal Atomic # 14 Polarization: -4.30 SS G_CDS: 2.04 Total: -2.26 kcal Atomic # 35 Polarization: -0.52 SS G_CDS: -0.68 Total: -1.20 kcal Total: -30.31 2.18 -28.12 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.039 kcal (2) G-P(sol) polarization free energy of solvation -30.307 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.346 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.124 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds