Wall clock time and date at job start Mon Mar 8 2021 02:23:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50698 * 109.47321 * 239.99522 * 2 1 3 5 5 C 1.35453 * 125.55909 * 120.02182 * 4 2 1 6 6 C 1.39837 * 107.86146 * 180.02562 * 5 4 2 7 7 C 1.37867 * 107.08859 * 0.02562 * 6 5 4 8 8 C 1.46679 * 126.23598 * 180.02562 * 7 6 5 9 9 O 1.21695 * 119.99851 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99926 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99876 * 179.97438 * 10 8 7 12 12 H 1.08993 * 112.84912 * 334.67142 * 11 10 8 13 13 C 1.53787 * 113.61249 * 105.86151 * 11 10 8 14 14 C 1.54050 * 86.98305 * 89.16214 * 13 11 10 15 15 H 1.08997 * 113.61606 * 270.88520 * 14 13 11 16 16 C 1.50701 * 113.69420 * 139.99073 * 14 13 11 17 17 C 1.38213 * 119.99984 * 322.46242 * 16 14 13 18 18 C 1.38252 * 120.00045 * 180.02562 * 17 16 14 19 19 C 1.38218 * 120.00008 * 359.95580 * 18 17 16 20 20 C 1.38249 * 120.00080 * 0.02562 * 19 18 17 21 21 C 1.50703 * 120.00298 * 180.02562 * 20 19 18 22 22 F 1.39899 * 109.46823 * 0.02562 * 21 20 19 23 23 F 1.39896 * 109.47096 * 119.99555 * 21 20 19 24 24 F 1.39896 * 109.47421 * 239.99854 * 21 20 19 25 25 C 1.38211 * 119.99998 * 359.80527 * 20 19 18 26 26 C 1.53777 * 87.08106 * 25.43135 * 14 13 11 27 27 N 1.35531 * 125.56709 * 299.72127 * 4 2 1 28 28 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 29 29 H 1.09001 * 109.47103 * 119.99412 * 2 1 3 30 30 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 31 31 H 1.48497 * 109.99780 * 181.31712 * 3 2 1 32 32 H 1.08003 * 126.07341 * 359.97438 * 5 4 2 33 33 H 1.08000 * 126.45548 * 180.02562 * 6 5 4 34 34 H 0.97001 * 120.00137 * 0.02562 * 10 8 7 35 35 H 1.08999 * 113.61319 * 203.66140 * 13 11 10 36 36 H 1.08995 * 113.61262 * 334.56846 * 13 11 10 37 37 H 1.07994 * 119.99825 * 359.97438 * 17 16 14 38 38 H 1.07997 * 120.00240 * 179.97438 * 18 17 16 39 39 H 1.08004 * 119.99824 * 180.02562 * 19 18 17 40 40 H 1.08005 * 120.00392 * 180.23326 * 25 20 19 41 41 H 1.08996 * 113.61663 * 220.02341 * 26 14 13 42 42 H 1.08997 * 113.61742 * 89.11771 * 26 14 13 43 43 H 0.97005 * 125.67503 * 359.96698 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7138 -0.1637 -2.1915 6 6 2.9569 -1.1458 -3.1568 7 6 2.3010 -2.2873 -2.7475 8 6 2.2771 -3.5735 -3.4522 9 8 2.8767 -3.7026 -4.5033 10 7 1.5911 -4.6123 -2.9357 11 6 1.5668 -5.8967 -3.6398 12 1 1.7341 -5.7948 -4.7120 13 6 2.4397 -6.9775 -2.9802 14 6 1.2013 -7.3519 -2.1440 15 1 1.1194 -6.7941 -1.2112 16 6 1.0242 -8.8366 -1.9555 17 6 1.3255 -9.7050 -2.9876 18 6 1.1625 -11.0670 -2.8149 19 6 0.6991 -11.5602 -1.6098 20 6 0.3980 -10.6916 -0.5773 21 6 -0.1068 -11.2293 0.7369 22 9 -0.1859 -12.6245 0.6704 23 9 0.7729 -10.8609 1.7604 24 9 -1.3756 -10.7019 1.0002 25 6 0.5642 -9.3303 -0.7487 26 6 0.3516 -6.7703 -3.2861 27 7 1.6789 -2.0024 -1.5530 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5137 0.8900 30 1 1.5614 2.4679 1.2084 31 1 3.5345 1.7703 -0.0321 32 1 3.0836 0.8509 -2.2095 33 1 3.5473 -1.0317 -4.0539 34 1 1.1129 -4.5093 -2.0981 35 1 2.7563 -7.7623 -3.6671 36 1 3.2617 -6.5740 -2.3891 37 1 1.6876 -9.3196 -3.9292 38 1 1.3976 -11.7456 -3.6215 39 1 0.5721 -12.6242 -1.4747 40 1 0.3326 -8.6519 0.0591 41 1 -0.5109 -6.1997 -2.9418 42 1 0.0984 -7.4985 -4.0565 43 1 1.1460 -2.6222 -1.0307 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705318_6580494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:23:05 Heat of formation + Delta-G solvation = -115.325511 kcal Electronic energy + Delta-G solvation = -31795.943060 eV Core-core repulsion = 26780.283481 eV Total energy + Delta-G solvation = -5015.659579 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.118 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -51.26892 -48.79552 -48.74117 -42.55993 -41.53090 -40.27209 -38.87612 -37.66178 -34.88505 -32.92595 -32.41159 -31.95402 -31.21231 -27.32806 -27.15763 -26.70230 -25.99989 -23.62490 -23.47717 -22.50041 -21.59755 -21.18974 -20.43579 -19.87416 -19.59546 -19.45039 -19.03865 -18.11123 -17.38662 -17.20112 -16.69419 -16.50779 -16.23776 -16.19752 -15.81058 -15.66415 -15.53059 -15.25890 -15.18367 -15.13471 -15.02327 -14.90494 -14.84949 -14.63503 -14.46556 -14.38506 -14.22495 -13.99130 -13.81836 -13.67514 -13.47364 -13.27178 -12.94455 -12.43937 -12.20118 -12.06928 -11.94202 -11.83452 -11.36941 -11.31331 -10.67144 -10.30157 -10.21640 -10.07602 -9.84005 -9.27795 -4.90669 -0.12159 0.19065 0.28679 1.23253 1.53661 1.57591 1.72899 1.88741 1.97417 2.21172 2.25053 2.39525 2.64105 2.92127 3.31528 3.37372 3.47297 3.58315 3.59362 3.63379 3.77148 3.80735 3.88969 4.03818 4.05692 4.20104 4.25897 4.31726 4.35374 4.44180 4.59187 4.60643 4.72978 4.79422 4.85900 4.88957 4.96259 4.97574 5.06468 5.11493 5.13784 5.28623 5.36652 5.53263 5.59763 5.74800 5.79186 6.26005 6.43703 6.67920 7.01469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.054 4.054 3 Si 0.803 3.197 4 C 0.030 3.970 5 C -0.206 4.206 6 C -0.117 4.117 7 C -0.065 4.065 8 C 0.592 3.408 9 O -0.568 6.568 10 N -0.701 5.701 11 C 0.114 3.886 12 H 0.093 0.907 13 C -0.141 4.141 14 C -0.068 4.068 15 H 0.108 0.892 16 C -0.073 4.073 17 C -0.085 4.085 18 C -0.117 4.117 19 C -0.088 4.088 20 C -0.194 4.194 21 C 0.506 3.494 22 F -0.181 7.181 23 F -0.184 7.184 24 F -0.182 7.182 25 C -0.077 4.077 26 C -0.122 4.122 27 N -0.512 5.512 28 H 0.399 0.601 29 H 0.116 0.884 30 H -0.296 1.296 31 H -0.286 1.286 32 H 0.168 0.832 33 H 0.146 0.854 34 H 0.409 0.591 35 H 0.106 0.894 36 H 0.065 0.935 37 H 0.154 0.846 38 H 0.157 0.843 39 H 0.143 0.857 40 H 0.138 0.862 41 H 0.087 0.913 42 H 0.109 0.891 43 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.273 2.193 -1.637 3.558 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.164 4.164 3 Si 0.708 3.292 4 C -0.089 4.089 5 C -0.230 4.230 6 C -0.143 4.143 7 C -0.178 4.178 8 C 0.381 3.619 9 O -0.446 6.446 10 N -0.351 5.351 11 C 0.009 3.991 12 H 0.111 0.889 13 C -0.180 4.180 14 C -0.086 4.086 15 H 0.126 0.874 16 C -0.073 4.073 17 C -0.103 4.103 18 C -0.134 4.134 19 C -0.106 4.106 20 C -0.196 4.196 21 C 0.452 3.548 22 F -0.162 7.162 23 F -0.165 7.165 24 F -0.164 7.164 25 C -0.095 4.095 26 C -0.160 4.160 27 N -0.110 5.110 28 H 0.250 0.750 29 H 0.133 0.867 30 H -0.224 1.224 31 H -0.212 1.212 32 H 0.185 0.815 33 H 0.164 0.836 34 H 0.245 0.755 35 H 0.124 0.876 36 H 0.084 0.916 37 H 0.171 0.829 38 H 0.175 0.825 39 H 0.161 0.839 40 H 0.156 0.844 41 H 0.106 0.894 42 H 0.128 0.872 43 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -1.415 2.186 -1.317 2.918 hybrid contribution -0.343 -1.236 1.283 1.814 sum -1.758 0.950 -0.033 1.998 Atomic orbital electron populations 1.86476 1.16793 1.82129 1.50826 1.25030 0.85419 1.11156 0.94779 0.92978 0.77823 0.73861 0.84586 1.21333 1.03026 0.85012 0.99567 1.20948 1.05178 1.01262 0.95601 1.21498 1.00703 0.91500 1.00641 1.20294 1.09250 0.96314 0.91984 1.17203 0.78318 0.82557 0.83841 1.90849 1.45974 1.83717 1.24108 1.45446 1.52370 1.10749 1.26582 1.21913 0.98060 0.81772 0.97327 0.88893 1.23633 0.96535 0.98532 0.99261 1.21664 0.97212 0.90518 0.99244 0.87376 1.19779 0.98665 0.96031 0.92857 1.21587 0.96094 0.93042 0.99533 1.21484 0.98482 0.96263 0.97209 1.21256 0.96262 1.00476 0.92570 1.19996 1.09811 0.96438 0.93315 1.18513 0.75258 0.75319 0.85704 1.93161 1.96146 1.30416 1.96521 1.93209 1.69121 1.91355 1.62825 1.93210 1.41858 1.86327 1.94988 1.20937 0.96950 0.93078 0.98514 1.23396 0.96286 0.98287 0.98050 1.41885 1.40058 1.11187 1.17834 0.75037 0.86657 1.22409 1.21237 0.81499 0.83592 0.75512 0.87590 0.91588 0.82881 0.82512 0.83923 0.84413 0.89434 0.87236 0.73314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.89 12.88 -148.98 -1.92 0.97 16 2 C -0.05 0.29 3.08 71.24 0.22 0.51 16 3 Si 0.80 -4.51 30.54 68.60 2.10 -2.41 16 4 C 0.03 -0.09 6.47 41.34 0.27 0.17 16 5 C -0.21 0.29 9.32 22.01 0.21 0.50 16 6 C -0.12 -0.34 10.65 22.57 0.24 -0.10 16 7 C -0.06 -0.12 7.06 40.35 0.28 0.16 16 8 C 0.59 2.51 7.79 86.45 0.67 3.18 16 9 O -0.57 -7.25 16.50 -4.33 -0.07 -7.33 16 10 N -0.70 2.27 5.26 -443.99 -2.34 -0.06 16 11 C 0.11 -0.44 4.30 45.52 0.20 -0.24 16 12 H 0.09 0.02 7.50 -2.39 -0.02 0.00 16 13 C -0.14 0.72 7.27 31.21 0.23 0.94 16 14 C -0.07 0.49 3.87 -10.92 -0.04 0.45 16 15 H 0.11 -0.96 8.09 -2.39 -0.02 -0.98 16 16 C -0.07 0.31 5.29 -19.86 -0.11 0.21 16 17 C -0.08 0.47 8.61 22.27 0.19 0.66 16 18 C -0.12 0.53 10.05 22.27 0.22 0.76 16 19 C -0.09 0.11 9.43 22.27 0.21 0.32 16 20 C -0.19 -0.21 5.37 -19.87 -0.11 -0.32 16 21 C 0.51 1.92 3.32 71.24 0.24 2.15 16 22 F -0.18 -0.86 15.97 44.97 0.72 -0.14 16 23 F -0.18 -1.01 17.23 44.97 0.77 -0.24 16 24 F -0.18 -0.94 17.24 44.97 0.78 -0.17 16 25 C -0.08 0.11 9.26 22.27 0.21 0.31 16 26 C -0.12 0.99 7.29 31.12 0.23 1.21 16 27 N -0.51 1.86 5.99 -171.93 -1.03 0.83 16 28 H 0.40 -4.92 8.70 -74.06 -0.64 -5.57 16 29 H 0.12 -0.59 7.96 -2.39 -0.02 -0.61 16 30 H -0.30 -0.51 7.11 99.48 0.71 0.20 16 31 H -0.29 -0.01 7.11 99.48 0.71 0.70 16 32 H 0.17 -0.93 6.17 -2.91 -0.02 -0.95 16 33 H 0.15 0.52 8.06 -2.91 -0.02 0.50 16 34 H 0.41 -3.67 7.83 -92.71 -0.73 -4.39 16 35 H 0.11 -0.70 6.33 -2.39 -0.02 -0.72 16 36 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 37 H 0.15 -1.48 6.67 -2.91 -0.02 -1.50 16 38 H 0.16 -1.42 8.06 -2.91 -0.02 -1.44 16 39 H 0.14 -0.40 7.16 -2.91 -0.02 -0.42 16 40 H 0.14 -0.48 8.05 -2.91 -0.02 -0.50 16 41 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 42 H 0.11 -0.99 7.72 -2.39 -0.02 -1.01 16 43 H 0.43 -3.71 8.19 -92.70 -0.76 -4.47 16 Total: 0.00 -21.24 377.03 1.39 -19.85 By element: Atomic # 1 Polarization: -21.19 SS G_CDS: -0.97 Total: -22.16 kcal Atomic # 6 Polarization: 7.51 SS G_CDS: 3.35 Total: 10.86 kcal Atomic # 7 Polarization: 4.13 SS G_CDS: -3.37 Total: 0.77 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -1.99 Total: -6.36 kcal Atomic # 9 Polarization: -2.82 SS G_CDS: 2.27 Total: -0.55 kcal Atomic # 14 Polarization: -4.51 SS G_CDS: 2.10 Total: -2.41 kcal Total: -21.24 1.39 -19.85 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705318_6580494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.471 kcal (2) G-P(sol) polarization free energy of solvation -21.243 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.714 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.854 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds