Wall clock time and date at job start Mon Mar 8 2021 02:24:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.37655 * 125.67764 * 2 1 4 4 C 1.46675 * 126.23279 * 0.02562 * 3 2 1 5 5 O 1.21692 * 120.00045 * 4.59019 * 4 3 2 6 6 N 1.34776 * 120.00090 * 184.58317 * 4 3 2 7 7 C 1.46500 * 119.99963 * 174.73540 * 6 4 3 8 8 H 1.08995 * 112.85346 * 336.19795 * 7 6 4 9 9 C 1.53778 * 113.68901 * 107.46909 * 7 6 4 10 10 C 1.53957 * 87.11425 * 89.19953 * 9 7 6 11 11 H 1.09005 * 113.60781 * 270.83818 * 10 9 7 12 12 C 1.50698 * 113.66914 * 139.89150 * 10 9 7 13 13 C 1.38204 * 119.97463 * 322.27169 * 12 10 9 14 14 C 1.38476 * 120.02449 * 179.76816 * 13 12 10 15 15 F 1.35104 * 120.01286 * 180.24798 * 14 13 12 16 16 C 1.38416 * 119.97616 * 0.53358 * 14 13 12 17 17 C 1.38423 * 119.94746 * 359.71843 * 16 14 13 18 18 F 1.35100 * 120.01004 * 180.02562 * 17 16 14 19 19 C 1.38207 * 119.97562 * 142.54814 * 12 10 9 20 20 C 1.53783 * 87.01834 * 25.36058 * 10 9 7 21 21 C 1.37877 * 107.53377 * 179.74024 * 3 2 1 22 22 C 1.39829 * 107.08259 * 0.22878 * 21 3 2 23 23 C 1.35451 * 107.87079 * 359.97438 * 22 21 3 24 24 C 1.50699 * 125.56797 * 180.02562 * 23 22 21 25 25 O 1.42901 * 109.47098 * 209.97546 * 24 23 22 26 26 Si 1.86297 * 109.46946 * 329.97125 * 24 23 22 27 27 H 1.09005 * 109.47288 * 94.06051 * 1 2 3 28 28 H 1.08999 * 109.47410 * 214.05695 * 1 2 3 29 29 H 1.08999 * 109.47212 * 334.06171 * 1 2 3 30 30 H 0.97003 * 119.99707 * 354.73768 * 6 4 3 31 31 H 1.09001 * 113.61387 * 203.67260 * 9 7 6 32 32 H 1.08995 * 113.61970 * 334.49259 * 9 7 6 33 33 H 1.08006 * 119.98882 * 0.02562 * 13 12 10 34 34 H 1.08003 * 120.02655 * 179.70197 * 16 14 13 35 35 H 1.08004 * 119.98739 * 359.97438 * 19 12 10 36 36 H 1.09002 * 113.61164 * 220.04804 * 20 10 9 37 37 H 1.09001 * 113.61233 * 89.23282 * 20 10 9 38 38 H 1.07991 * 126.45480 * 180.26560 * 21 3 2 39 39 H 1.08006 * 126.07001 * 179.97438 * 22 21 3 40 40 H 1.08999 * 109.47460 * 89.97639 * 24 23 22 41 41 H 0.96702 * 114.00128 * 59.99248 * 25 24 23 42 42 H 1.48503 * 109.99794 * 58.68507 * 26 24 23 43 43 H 1.48504 * 110.00144 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8123 2.5124 0.0005 5 8 0.6249 2.7646 0.0854 6 7 2.7090 3.5143 -0.0928 7 6 2.2492 4.9005 -0.2085 8 1 1.2406 4.9794 -0.6142 9 6 2.4672 5.7322 1.0664 10 6 3.8536 6.0913 0.5016 11 1 4.6358 5.3864 0.7836 12 6 4.2474 7.5275 0.7322 13 6 3.2970 8.5269 0.6429 14 6 3.6567 9.8465 0.8594 15 9 2.7264 10.8228 0.7769 16 6 4.9709 10.1656 1.1544 17 6 5.9230 9.1643 1.2384 18 9 7.2059 9.4743 1.5268 19 6 5.5598 7.8449 1.0273 20 6 3.2636 5.8308 -0.8944 21 6 3.5780 0.6888 0.0060 22 6 3.5521 -0.7092 0.0042 23 6 2.2555 -1.1009 -0.0020 24 6 1.7709 -2.5279 -0.0053 25 8 0.5157 -2.6031 -0.6843 26 14 3.0152 -3.6042 -0.8794 27 1 -0.3634 -0.0728 -1.0251 28 1 -0.3634 -0.8514 0.5755 29 1 -0.3633 0.9241 0.4495 30 1 3.6588 3.3175 -0.0834 31 1 1.7964 6.5873 1.1499 32 1 2.5056 5.1341 1.9768 33 1 2.2725 8.2782 0.4083 34 1 5.2533 11.1950 1.3186 35 1 6.3025 7.0635 1.0928 36 1 3.9465 5.3119 -1.5672 37 1 2.8104 6.7121 -1.3483 38 1 4.4582 1.3144 0.0116 39 1 4.4132 -1.3612 0.0073 40 1 1.6497 -2.8728 1.0215 41 1 0.5487 -2.3108 -1.6055 42 1 4.3332 -3.5099 -0.2016 43 1 2.5487 -5.0140 -0.8900 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:24:00 Heat of formation + Delta-G solvation = -50.584151 kcal Electronic energy + Delta-G solvation = -29479.864684 eV Core-core repulsion = 24936.466477 eV Total energy + Delta-G solvation = -4543.398208 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.128 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -50.03139 -50.01117 -42.63761 -41.56886 -40.01610 -38.61585 -37.80045 -34.90544 -33.67659 -32.21563 -31.46220 -31.11844 -27.56246 -27.31589 -26.92497 -26.15911 -24.04623 -23.50379 -22.91434 -21.63501 -20.63793 -20.33799 -19.07059 -18.81982 -18.16293 -18.11641 -17.51934 -17.22232 -17.02089 -16.93810 -16.73527 -16.34242 -16.31589 -16.04788 -15.78841 -15.57848 -15.35376 -15.18535 -14.89021 -14.80714 -14.48526 -14.43053 -14.13835 -13.79080 -13.75051 -13.67569 -13.27016 -13.17131 -13.01010 -12.97475 -12.84527 -12.28180 -12.24569 -12.03826 -11.85319 -11.49119 -11.07075 -10.75123 -10.23365 -9.97614 -9.85037 -9.77739 -9.12734 -5.07181 -0.16198 -0.13365 0.37287 1.06853 1.46516 1.64174 1.65830 1.93486 2.18527 2.28886 2.33642 2.74048 3.14115 3.17708 3.26621 3.42158 3.46676 3.50694 3.64389 3.69098 3.73257 3.81738 3.90283 3.96385 3.98791 4.26962 4.31833 4.39927 4.42043 4.47369 4.52119 4.58604 4.63297 4.66484 4.72012 4.78837 4.83384 4.88316 4.90953 4.93322 4.96479 5.10739 5.20542 5.43848 5.65758 5.66713 5.94738 6.10590 6.31921 6.39975 7.11813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.390 5.390 3 C -0.053 4.053 4 C 0.595 3.405 5 O -0.543 6.543 6 N -0.703 5.703 7 C 0.124 3.876 8 H 0.108 0.892 9 C -0.144 4.144 10 C -0.077 4.077 11 H 0.106 0.894 12 C -0.012 4.012 13 C -0.163 4.163 14 C 0.136 3.864 15 F -0.129 7.129 16 C -0.198 4.198 17 C 0.135 3.865 18 F -0.129 7.129 19 C -0.161 4.161 20 C -0.134 4.134 21 C -0.134 4.134 22 C -0.205 4.205 23 C 0.017 3.983 24 C -0.051 4.051 25 O -0.543 6.543 26 Si 0.723 3.277 27 H 0.077 0.923 28 H 0.091 0.909 29 H 0.103 0.897 30 H 0.404 0.596 31 H 0.098 0.902 32 H 0.079 0.921 33 H 0.145 0.855 34 H 0.149 0.851 35 H 0.143 0.857 36 H 0.082 0.918 37 H 0.102 0.898 38 H 0.146 0.854 39 H 0.147 0.853 40 H 0.119 0.881 41 H 0.380 0.620 42 H -0.252 1.252 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.385 -1.887 -3.158 4.384 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.062 5.062 3 C -0.167 4.167 4 C 0.384 3.616 5 O -0.421 6.421 6 N -0.354 5.354 7 C 0.019 3.981 8 H 0.126 0.874 9 C -0.183 4.183 10 C -0.095 4.095 11 H 0.124 0.876 12 C -0.012 4.012 13 C -0.182 4.182 14 C 0.117 3.883 15 F -0.107 7.107 16 C -0.217 4.217 17 C 0.116 3.884 18 F -0.108 7.108 19 C -0.180 4.180 20 C -0.172 4.172 21 C -0.160 4.160 22 C -0.229 4.229 23 C -0.102 4.102 24 C -0.161 4.161 25 O -0.348 6.348 26 Si 0.622 3.378 27 H 0.095 0.905 28 H 0.110 0.890 29 H 0.121 0.879 30 H 0.240 0.760 31 H 0.116 0.884 32 H 0.098 0.902 33 H 0.162 0.838 34 H 0.167 0.833 35 H 0.161 0.839 36 H 0.101 0.899 37 H 0.120 0.880 38 H 0.163 0.837 39 H 0.165 0.835 40 H 0.136 0.864 41 H 0.228 0.772 42 H -0.176 1.176 43 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 1.464 -2.532 -2.460 3.822 hybrid contribution 0.425 0.668 0.741 1.084 sum 1.889 -1.864 -1.720 3.162 Atomic orbital electron populations 1.22412 0.75389 1.05786 1.04130 1.43758 1.07047 1.03982 1.51420 1.19968 0.90505 0.87389 1.18883 1.16954 0.85501 0.83477 0.75711 1.90800 1.16305 1.84733 1.50265 1.45271 1.09747 1.05264 1.75111 1.21820 0.99669 0.79754 0.96870 0.87352 1.23630 0.95507 1.00455 0.98670 1.21726 0.98114 0.91932 0.97752 0.87574 1.19303 0.91657 0.95077 0.95205 1.21068 1.01654 0.90551 1.04947 1.17251 0.85690 0.85450 0.99935 1.91566 1.64292 1.61450 1.93429 1.21093 0.91948 1.01256 1.07417 1.17281 0.78870 0.92987 0.99278 1.91562 1.34909 1.93748 1.90553 1.21122 0.97395 0.95081 1.04384 1.23453 0.98158 0.99970 0.95650 1.21274 0.94342 0.95182 1.05200 1.20649 0.95096 0.95431 1.11712 1.21137 0.90940 0.89233 1.08853 1.24978 0.94276 0.94526 1.02286 1.86501 1.30096 1.89048 1.29173 0.94018 0.76331 0.77748 0.89665 0.90489 0.89016 0.87889 0.76029 0.88384 0.90213 0.83762 0.83329 0.83902 0.89897 0.87971 0.83651 0.83525 0.86361 0.77211 1.17634 1.17766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.03 9.38 59.84 0.56 0.59 16 2 N -0.39 -0.50 3.16 -115.62 -0.37 -0.87 16 3 C -0.05 -0.07 6.89 -81.98 -0.56 -0.63 16 4 C 0.59 0.99 7.77 -12.86 -0.10 0.89 16 5 O -0.54 -2.58 14.21 5.20 0.07 -2.51 16 6 N -0.70 1.15 5.25 -54.33 -0.29 0.87 16 7 C 0.12 -0.26 4.29 -67.12 -0.29 -0.54 16 8 H 0.11 -0.05 7.53 -51.93 -0.39 -0.44 16 9 C -0.14 0.35 7.26 -25.83 -0.19 0.17 16 10 C -0.08 0.27 3.87 -90.87 -0.35 -0.08 16 11 H 0.11 -0.49 8.09 -51.93 -0.42 -0.91 16 12 C -0.01 0.02 5.29 -104.65 -0.55 -0.53 16 13 C -0.16 0.19 8.57 -39.51 -0.34 -0.15 16 14 C 0.14 0.06 7.30 -39.43 -0.29 -0.23 16 15 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 16 C -0.20 -0.07 10.01 -39.45 -0.39 -0.47 16 17 C 0.14 0.06 7.30 -39.43 -0.29 -0.23 16 18 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 19 C -0.16 0.19 9.69 -39.51 -0.38 -0.20 16 20 C -0.13 0.50 7.29 -25.92 -0.19 0.32 16 21 C -0.13 0.06 10.36 -39.12 -0.41 -0.35 16 22 C -0.21 0.03 9.37 -39.98 -0.37 -0.34 16 23 C 0.02 0.00 6.14 -81.95 -0.50 -0.50 16 24 C -0.05 0.06 2.90 36.01 0.10 0.16 16 25 O -0.54 0.62 10.50 -35.23 -0.37 0.25 16 26 Si 0.72 -1.61 31.29 -169.99 -5.32 -6.93 16 27 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.09 0.02 7.09 -51.93 -0.37 -0.35 16 29 H 0.10 0.22 6.01 -51.93 -0.31 -0.09 16 30 H 0.40 -1.63 7.61 -40.82 -0.31 -1.94 16 31 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 32 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 33 H 0.14 -0.38 6.67 -52.48 -0.35 -0.73 16 34 H 0.15 -0.09 8.06 -52.48 -0.42 -0.52 16 35 H 0.14 -0.41 8.05 -52.48 -0.42 -0.83 16 36 H 0.08 -0.35 8.14 -51.93 -0.42 -0.78 16 37 H 0.10 -0.40 7.71 -51.93 -0.40 -0.80 16 38 H 0.15 -0.48 7.45 -52.49 -0.39 -0.87 16 39 H 0.15 -0.21 6.62 -52.48 -0.35 -0.56 16 40 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 41 H 0.38 -1.68 8.70 45.56 0.40 -1.28 16 42 H -0.25 0.07 6.76 56.52 0.38 0.45 16 43 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 LS Contribution 364.78 15.07 5.50 5.50 Total: 0.00 -7.53 364.78 -10.20 -17.73 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -4.97 Total: -11.55 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -4.54 Total: -2.13 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -0.65 Total: 0.00 kcal Atomic # 8 Polarization: -1.96 SS G_CDS: -0.30 Total: -2.26 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.08 Total: -0.36 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.32 Total: -6.93 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -7.53 -10.20 -17.73 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.853 kcal (2) G-P(sol) polarization free energy of solvation -7.530 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.584 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds