Wall clock time and date at job start Mon Mar 8 2021 02:24:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38413 * 119.88569 * 244.72662 * 4 2 1 6 6 C 1.38253 * 120.33529 * 179.73049 * 5 4 2 7 7 C 1.38276 * 120.11592 * 0.54452 * 6 5 4 8 8 F 1.35102 * 120.11144 * 179.75202 * 7 6 5 9 9 C 1.39861 * 119.78178 * 359.72981 * 7 6 5 10 10 C 1.47687 * 120.16970 * 179.97438 * 9 7 6 11 11 O 1.21570 * 119.99945 * 0.02562 * 10 9 7 12 12 N 1.34782 * 120.00494 * 180.02562 * 10 9 7 13 13 C 1.46501 * 120.00431 * 180.02562 * 12 10 9 14 14 H 1.09001 * 112.84631 * 23.79924 * 13 12 10 15 15 C 1.53773 * 113.61314 * 154.99801 * 13 12 10 16 16 C 1.53787 * 87.08042 * 89.11673 * 15 13 12 17 17 H 1.09001 * 113.60907 * 270.87762 * 16 15 13 18 18 C 1.50700 * 113.61244 * 139.97842 * 16 15 13 19 19 C 1.38204 * 119.97546 * 299.72424 * 18 16 15 20 20 C 1.38483 * 120.02294 * 179.73148 * 19 18 16 21 21 F 1.35101 * 120.01049 * 180.29786 * 20 19 18 22 22 C 1.38420 * 119.97041 * 0.54176 * 20 19 18 23 23 C 1.38409 * 119.95340 * 359.73021 * 22 20 19 24 24 F 1.35101 * 120.01356 * 179.97438 * 23 22 20 25 25 C 1.38209 * 119.97194 * 120.00106 * 18 16 15 26 26 C 1.53778 * 87.08067 * 25.43168 * 16 15 13 27 27 C 1.37894 * 119.89075 * 65.00581 * 4 2 1 28 28 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 29 29 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 30 30 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 31 31 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 32 32 H 1.07995 * 119.83384 * 0.02562 * 5 4 2 33 33 H 1.07996 * 119.94294 * 180.26005 * 6 5 4 34 34 H 0.96999 * 119.99234 * 359.97438 * 12 10 9 35 35 H 1.09005 * 113.61477 * 203.66218 * 15 13 12 36 36 H 1.08995 * 113.61905 * 334.48440 * 15 13 12 37 37 H 1.07994 * 119.98773 * 359.97438 * 19 18 16 38 38 H 1.08004 * 120.01671 * 179.75227 * 22 20 19 39 39 H 1.08003 * 119.99102 * 0.02562 * 25 18 16 40 40 H 1.09005 * 113.61294 * 220.01959 * 26 16 15 41 41 H 1.08995 * 113.61467 * 89.12042 * 26 16 15 42 42 H 1.08001 * 120.06216 * 359.97122 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6441 -0.0103 2.1885 6 6 3.1044 -0.6515 3.3236 7 6 2.8643 -2.0013 3.5035 8 9 3.3184 -2.6289 4.6104 9 6 2.1494 -2.7147 2.5360 10 6 1.8886 -4.1568 2.7192 11 8 2.2952 -4.7266 3.7131 12 7 1.1997 -4.8412 1.7845 13 6 0.9405 -6.2716 1.9665 14 1 0.9677 -6.5769 3.0125 15 6 -0.3006 -6.7738 1.2102 16 6 0.6316 -7.0402 0.0165 17 1 0.7398 -6.1861 -0.6520 18 6 0.3252 -8.3221 -0.7143 19 6 0.3932 -9.5305 -0.0471 20 6 0.1065 -10.7085 -0.7163 21 9 0.1671 -11.8891 -0.0622 22 6 -0.2374 -10.6763 -2.0567 23 6 -0.2997 -9.4660 -2.7253 24 9 -0.6347 -9.4332 -4.0337 25 6 -0.0179 -8.2888 -2.0527 26 6 1.7733 -7.1715 1.0383 27 6 1.6839 -2.0569 1.3958 28 1 -0.3934 0.4418 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 3.5346 1.7702 0.0322 31 1 1.5616 2.4678 -1.2086 32 1 2.8377 1.0432 2.0507 33 1 3.6563 -0.0981 4.0689 34 1 0.8749 -4.3865 0.9917 35 1 -0.7348 -7.6786 1.6356 36 1 -1.0416 -5.9968 1.0223 37 1 0.6662 -9.5557 0.9975 38 1 -0.4573 -11.5950 -2.5803 39 1 -0.0660 -7.3443 -2.5744 40 1 2.7073 -6.7151 0.7104 41 1 1.9062 -8.1850 1.4167 42 1 1.1309 -2.6015 0.6448 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:24:17 Heat of formation + Delta-G solvation = -111.706515 kcal Electronic energy + Delta-G solvation = -31264.876271 eV Core-core repulsion = 26342.111012 eV Total energy + Delta-G solvation = -4922.765258 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.107 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -50.09717 -50.07399 -50.00828 -41.80301 -40.83540 -39.85973 -38.63451 -37.40518 -34.85452 -32.79754 -32.29051 -31.69442 -31.31656 -26.84351 -26.74560 -26.58630 -25.36537 -24.00317 -23.46834 -22.73062 -21.70695 -20.46621 -19.25162 -18.96714 -18.29943 -18.25610 -18.12804 -17.46422 -17.31921 -17.06941 -16.98110 -16.89364 -16.70193 -16.39330 -16.22697 -16.03178 -15.86447 -15.65837 -15.58746 -15.36441 -15.12311 -14.63806 -14.42697 -14.34265 -14.09145 -13.73165 -13.67169 -13.52746 -13.20292 -13.10659 -12.94814 -12.83261 -12.79699 -12.15886 -12.11869 -11.86739 -11.73998 -11.34528 -11.22162 -10.44809 -10.40795 -10.13360 -9.92882 -9.83663 -9.81510 -4.95316 -0.49515 -0.12516 -0.10684 -0.02249 1.33169 1.59229 1.68630 1.90084 2.03941 2.23108 2.47844 2.75454 3.05719 3.23433 3.35171 3.36815 3.47326 3.52890 3.59213 3.63931 3.68878 3.75120 3.87733 3.89558 4.01375 4.04530 4.08749 4.12482 4.44505 4.55045 4.59299 4.69585 4.71796 4.74358 4.75452 4.78498 4.79714 4.87339 4.95060 4.95161 4.95902 5.00897 5.09249 5.15141 5.28488 5.53385 5.60543 5.69497 6.34787 6.81412 7.04411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.064 4.064 3 Si 0.766 3.234 4 C -0.135 4.135 5 C -0.050 4.050 6 C -0.153 4.153 7 C 0.133 3.867 8 F -0.137 7.137 9 C -0.188 4.188 10 C 0.557 3.443 11 O -0.570 6.570 12 N -0.691 5.691 13 C 0.112 3.888 14 H 0.088 0.912 15 C -0.123 4.123 16 C -0.066 4.066 17 H 0.126 0.874 18 C -0.009 4.009 19 C -0.160 4.160 20 C 0.118 3.882 21 F -0.141 7.141 22 C -0.205 4.205 23 C 0.118 3.882 24 F -0.140 7.140 25 C -0.154 4.154 26 C -0.144 4.144 27 C -0.024 4.024 28 H 0.397 0.603 29 H 0.120 0.880 30 H -0.283 1.283 31 H -0.303 1.303 32 H 0.168 0.832 33 H 0.167 0.833 34 H 0.416 0.584 35 H 0.105 0.895 36 H 0.095 0.905 37 H 0.157 0.843 38 H 0.151 0.849 39 H 0.163 0.837 40 H 0.072 0.928 41 H 0.100 0.900 42 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.364 7.283 -1.793 7.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.174 4.174 3 Si 0.673 3.327 4 C -0.135 4.135 5 C -0.067 4.067 6 C -0.171 4.171 7 C 0.112 3.888 8 F -0.116 7.116 9 C -0.192 4.192 10 C 0.345 3.655 11 O -0.450 6.450 12 N -0.343 5.343 13 C 0.007 3.993 14 H 0.106 0.894 15 C -0.161 4.161 16 C -0.084 4.084 17 H 0.144 0.856 18 C -0.009 4.009 19 C -0.178 4.178 20 C 0.099 3.901 21 F -0.119 7.119 22 C -0.224 4.224 23 C 0.098 3.902 24 F -0.118 7.118 25 C -0.173 4.173 26 C -0.182 4.182 27 C -0.042 4.042 28 H 0.248 0.752 29 H 0.137 0.863 30 H -0.210 1.210 31 H -0.231 1.231 32 H 0.185 0.815 33 H 0.184 0.816 34 H 0.255 0.745 35 H 0.123 0.877 36 H 0.114 0.886 37 H 0.174 0.826 38 H 0.169 0.831 39 H 0.181 0.819 40 H 0.091 0.909 41 H 0.118 0.882 42 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -1.527 7.062 -2.039 7.508 hybrid contribution 0.185 -1.293 -0.420 1.372 sum -1.342 5.769 -2.459 6.413 Atomic orbital electron populations 1.86497 1.16669 1.82028 1.50682 1.25062 0.85597 1.10134 0.96621 0.93868 0.78061 0.75367 0.85443 1.20473 1.00600 0.94370 0.98075 1.21381 0.93342 1.00872 0.91146 1.21393 1.03310 0.91485 1.00950 1.18225 0.95606 0.91762 0.83181 1.91561 1.86397 1.82962 1.50635 1.20036 1.06912 0.93769 0.98506 1.18310 0.77852 0.86618 0.82703 1.90849 1.52422 1.71021 1.30699 1.45412 1.55729 1.09559 1.23632 1.21900 0.97402 0.79717 1.00290 0.89420 1.23406 0.95715 1.02999 0.93938 1.21717 0.96949 0.94445 0.95298 0.85623 1.19436 0.94663 0.94588 0.92239 1.21276 1.03700 0.90380 1.02463 1.17429 1.01068 0.81555 0.90085 1.91532 1.93891 1.45527 1.80965 1.21183 1.07327 0.99450 0.94482 1.17454 1.00044 0.94260 0.78399 1.91533 1.89833 1.97318 1.33139 1.21364 1.02744 0.98117 0.95043 1.23598 0.97691 1.01038 0.95889 1.21207 0.94634 0.94165 0.94220 0.75227 0.86259 1.20995 1.23137 0.81501 0.81595 0.74536 0.87656 0.88597 0.82569 0.83136 0.81922 0.90939 0.88172 0.82225 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 4.31 12.83 -148.98 -1.91 2.40 16 2 C -0.06 0.54 2.80 71.24 0.20 0.74 16 3 Si 0.77 -6.31 29.79 68.60 2.04 -4.27 16 4 C -0.13 1.00 5.35 -19.90 -0.11 0.89 16 5 C -0.05 0.40 8.66 22.32 0.19 0.59 16 6 C -0.15 0.56 10.01 22.28 0.22 0.78 16 7 C 0.13 0.48 7.29 22.67 0.17 0.64 16 8 F -0.14 -1.50 15.55 44.97 0.70 -0.80 16 9 C -0.19 -0.24 5.88 -20.05 -0.12 -0.36 16 10 C 0.56 2.82 7.77 86.74 0.67 3.49 16 11 O -0.57 -8.51 14.94 -3.94 -0.06 -8.57 16 12 N -0.69 2.16 5.21 -443.06 -2.31 -0.15 16 13 C 0.11 -0.36 4.32 45.51 0.20 -0.16 16 14 H 0.09 0.17 7.46 -2.39 -0.02 0.16 16 15 C -0.12 0.99 7.29 31.12 0.23 1.22 16 16 C -0.07 0.54 3.86 -11.01 -0.04 0.50 16 17 H 0.13 -1.49 8.09 -2.39 -0.02 -1.51 16 18 C -0.01 0.04 5.29 -19.88 -0.11 -0.07 16 19 C -0.16 0.34 8.60 22.32 0.19 0.54 16 20 C 0.12 0.21 7.30 22.37 0.16 0.37 16 21 F -0.14 -0.68 17.27 44.97 0.78 0.10 16 22 C -0.20 -0.36 10.01 22.35 0.22 -0.13 16 23 C 0.12 0.14 7.30 22.37 0.16 0.30 16 24 F -0.14 -0.55 17.27 44.97 0.78 0.23 16 25 C -0.15 0.49 9.69 22.32 0.22 0.70 16 26 C -0.14 0.69 7.25 31.12 0.23 0.91 16 27 C -0.02 0.13 9.17 22.52 0.21 0.34 16 28 H 0.40 -6.04 8.70 -74.06 -0.64 -6.69 16 29 H 0.12 -1.02 7.96 -2.39 -0.02 -1.04 16 30 H -0.28 0.94 7.11 99.48 0.71 1.65 16 31 H -0.30 -0.21 7.11 99.48 0.71 0.50 16 32 H 0.17 -2.25 4.88 -2.91 -0.01 -2.27 16 33 H 0.17 -1.25 8.06 -2.91 -0.02 -1.28 16 34 H 0.42 -4.04 6.73 -92.71 -0.62 -4.66 16 35 H 0.11 -0.85 7.73 -2.38 -0.02 -0.87 16 36 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 37 H 0.16 -0.78 6.64 -2.91 -0.02 -0.80 16 38 H 0.15 0.05 8.06 -2.91 -0.02 0.02 16 39 H 0.16 -1.23 8.05 -2.91 -0.02 -1.25 16 40 H 0.07 -0.21 8.14 -2.38 -0.02 -0.23 16 41 H 0.10 -0.50 6.29 -2.39 -0.02 -0.51 16 42 H 0.16 -1.72 6.40 -2.91 -0.02 -1.74 16 Total: 0.00 -24.07 366.25 2.81 -21.26 By element: Atomic # 1 Polarization: -21.41 SS G_CDS: -0.11 Total: -21.52 kcal Atomic # 6 Polarization: 8.42 SS G_CDS: 2.90 Total: 11.32 kcal Atomic # 7 Polarization: 2.16 SS G_CDS: -2.31 Total: -0.15 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -1.97 Total: -6.16 kcal Atomic # 9 Polarization: -2.73 SS G_CDS: 2.25 Total: -0.47 kcal Atomic # 14 Polarization: -6.31 SS G_CDS: 2.04 Total: -4.27 kcal Total: -24.07 2.81 -21.26 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.444 kcal (2) G-P(sol) polarization free energy of solvation -24.070 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.263 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.707 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds