Wall clock time and date at job start Mon Mar 8 2021 02:24:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86293 * 109.47297 * 2 1 4 4 C 1.50701 * 109.47105 * 119.99958 * 2 1 3 5 5 C 1.34461 * 126.48357 * 255.02687 * 4 2 1 6 6 N 1.36557 * 109.98494 * 179.97438 * 5 4 2 7 7 C 1.37826 * 109.86605 * 0.02562 * 6 5 4 8 8 C 1.38647 * 133.38595 * 180.35567 * 7 6 5 9 9 C 1.39314 * 119.66840 * 180.17416 * 8 7 6 10 10 C 1.47578 * 119.83397 * 179.72574 * 9 8 7 11 11 O 1.21588 * 119.99806 * 359.72375 * 10 9 8 12 12 N 1.34766 * 120.00213 * 179.72421 * 10 9 8 13 13 C 1.46500 * 120.00324 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.90701 * 336.25546 * 13 12 10 15 15 C 1.53786 * 113.61441 * 107.50498 * 13 12 10 16 16 C 1.53779 * 87.07997 * 89.11741 * 15 13 12 17 17 H 1.08997 * 113.69165 * 270.86831 * 16 15 13 18 18 C 1.50706 * 113.60955 * 139.98049 * 16 15 13 19 19 C 1.38199 * 119.97576 * 322.22697 * 18 16 15 20 20 C 1.38480 * 120.02465 * 179.76737 * 19 18 16 21 21 F 1.35095 * 120.01421 * 180.24553 * 20 19 18 22 22 C 1.38417 * 119.97021 * 0.48631 * 20 19 18 23 23 C 1.38420 * 119.95392 * 359.76641 * 22 20 19 24 24 F 1.35097 * 120.01298 * 180.02562 * 23 22 20 25 25 C 1.38207 * 119.97093 * 142.49999 * 18 16 15 26 26 C 1.53781 * 87.08357 * 25.43165 * 16 15 13 27 27 C 1.40204 * 120.33513 * 359.44879 * 9 8 7 28 28 C 1.36236 * 120.37869 * 0.25128 * 27 9 8 29 29 C 1.39880 * 119.95563 * 0.02872 * 28 27 9 30 30 H 0.96705 * 114.00458 * 300.00108 * 1 2 3 31 31 H 1.09001 * 109.47541 * 239.99276 * 2 1 3 32 32 H 1.48498 * 110.00115 * 178.67934 * 3 2 1 33 33 H 1.48506 * 109.99924 * 299.99950 * 3 2 1 34 34 H 1.08000 * 125.00300 * 359.95585 * 5 4 2 35 35 H 0.97001 * 125.06378 * 179.97438 * 6 5 4 36 36 H 1.08005 * 120.16562 * 359.89868 * 8 7 6 37 37 H 0.97006 * 120.00111 * 0.02562 * 12 10 9 38 38 H 1.08997 * 113.61318 * 334.56902 * 15 13 12 39 39 H 1.09001 * 113.61119 * 203.66602 * 15 13 12 40 40 H 1.07995 * 119.99098 * 359.97438 * 19 18 16 41 41 H 1.08002 * 120.02505 * 179.78937 * 22 20 19 42 42 H 1.08002 * 119.99155 * 359.97438 * 25 18 16 43 43 H 1.09001 * 113.61397 * 89.11508 * 26 16 15 44 44 H 1.08994 * 113.61764 * 220.01390 * 26 16 15 45 45 H 1.07999 * 119.80842 * 180.27576 * 27 9 8 46 46 H 1.08000 * 120.02010 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4611 -0.1363 2.3248 6 7 2.8026 -1.0946 3.2357 7 6 2.4946 -2.3431 2.7398 8 6 2.6253 -3.6275 3.2453 9 6 2.2136 -4.7155 2.4788 10 6 2.3566 -6.0846 3.0108 11 8 2.8375 -6.2611 4.1135 12 7 1.9543 -7.1392 2.2744 13 6 2.0969 -8.4983 2.8023 14 1 2.8748 -8.5792 3.5614 15 6 0.7627 -9.1413 3.2166 16 6 0.6529 -9.6568 1.7719 17 1 0.1520 -8.9633 1.0964 18 6 0.1168 -11.0617 1.6714 19 6 0.4808 -12.0084 2.6101 20 6 -0.0150 -13.2984 2.5215 21 9 0.3371 -14.2223 3.4420 22 6 -0.8674 -13.6419 1.4865 23 6 -1.2272 -12.6943 0.5439 24 9 -2.0595 -13.0282 -0.4665 25 6 -0.7340 -11.4037 0.6373 26 6 2.1874 -9.5770 1.7101 27 6 1.6587 -4.5160 1.2068 28 6 1.5209 -3.2570 0.7049 29 6 1.9350 -2.1548 1.4602 30 1 -0.3934 0.4417 0.7650 31 1 1.7924 -0.5139 -0.8899 32 1 3.5345 1.7702 0.0322 33 1 1.5615 2.4678 -1.2085 34 1 2.5969 0.9262 2.4628 35 1 3.2029 -0.9223 4.1023 36 1 3.0483 -3.7841 4.2267 37 1 1.5711 -6.9984 1.3945 38 1 -0.0074 -8.4169 3.4814 39 1 0.8715 -9.9346 3.9561 40 1 1.1495 -11.7413 3.4149 41 1 -1.2519 -14.6486 1.4146 42 1 -1.0146 -10.6641 -0.0980 43 1 2.6856 -10.4895 2.0378 44 1 2.5673 -9.2045 0.7588 45 1 1.3382 -5.3653 0.6216 46 1 1.0931 -3.1100 -0.2758 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:24:27 Heat of formation + Delta-G solvation = -39.679942 kcal Electronic energy + Delta-G solvation = -33186.848273 eV Core-core repulsion = 28259.244486 eV Total energy + Delta-G solvation = -4927.603787 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.128 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -50.01627 -49.99613 -42.52030 -41.68397 -40.35730 -38.78586 -37.85755 -37.45116 -34.62673 -33.28006 -32.11523 -31.40523 -30.74753 -30.46811 -26.89746 -26.85396 -26.47116 -24.82004 -23.93557 -23.65660 -22.98017 -21.62038 -20.86091 -20.46873 -19.50018 -18.95464 -18.33464 -18.12618 -17.67492 -17.49293 -17.17136 -17.00296 -16.98876 -16.71844 -16.30109 -16.27430 -16.07748 -15.93074 -15.70075 -15.53434 -15.31869 -15.14701 -15.03516 -14.75045 -14.74373 -14.33467 -14.14003 -14.03113 -13.76801 -13.66215 -13.16169 -13.14215 -12.97661 -12.85097 -12.61705 -12.33617 -12.26444 -12.22852 -11.94391 -11.81721 -11.44825 -10.96609 -10.78170 -10.37846 -10.15737 -9.95351 -9.83153 -9.38563 -8.84274 -5.12297 -0.29499 -0.14182 -0.11553 0.36490 1.26389 1.34133 1.59913 1.82586 1.95111 1.96761 2.15350 2.20814 2.75829 2.89696 3.16925 3.28834 3.44633 3.49620 3.52320 3.55634 3.66929 3.70683 3.73552 3.76274 3.82546 3.84061 3.92764 4.00725 4.06933 4.28674 4.39494 4.43775 4.47490 4.52425 4.55291 4.61996 4.66498 4.69979 4.73465 4.75217 4.85848 4.90312 4.92999 4.95395 4.97433 5.19975 5.23213 5.40358 5.42644 5.52625 5.58135 5.67641 5.95524 6.33453 6.43322 6.62778 7.19133 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.030 4.030 3 Si 0.684 3.316 4 C -0.211 4.211 5 C 0.077 3.923 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.055 4.055 9 C -0.122 4.122 10 C 0.567 3.433 11 O -0.535 6.535 12 N -0.710 5.710 13 C 0.121 3.879 14 H 0.109 0.891 15 C -0.144 4.144 16 C -0.077 4.077 17 H 0.106 0.894 18 C -0.012 4.012 19 C -0.163 4.163 20 C 0.136 3.864 21 F -0.129 7.129 22 C -0.198 4.198 23 C 0.135 3.865 24 F -0.129 7.129 25 C -0.161 4.161 26 C -0.135 4.135 27 C -0.113 4.113 28 C -0.073 4.073 29 C -0.063 4.063 30 H 0.377 0.623 31 H 0.111 0.889 32 H -0.256 1.256 33 H -0.254 1.254 34 H 0.179 0.821 35 H 0.422 0.578 36 H 0.136 0.864 37 H 0.402 0.598 38 H 0.079 0.921 39 H 0.098 0.902 40 H 0.145 0.855 41 H 0.149 0.851 42 H 0.143 0.857 43 H 0.101 0.899 44 H 0.081 0.919 45 H 0.125 0.875 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.101 4.934 0.241 4.941 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.586 3.414 4 C -0.219 4.219 5 C -0.051 4.051 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.076 4.076 9 C -0.127 4.127 10 C 0.356 3.644 11 O -0.412 6.412 12 N -0.362 5.362 13 C 0.015 3.985 14 H 0.127 0.873 15 C -0.183 4.183 16 C -0.095 4.095 17 H 0.124 0.876 18 C -0.012 4.012 19 C -0.182 4.182 20 C 0.117 3.883 21 F -0.107 7.107 22 C -0.217 4.217 23 C 0.116 3.884 24 F -0.108 7.108 25 C -0.180 4.180 26 C -0.173 4.173 27 C -0.133 4.133 28 C -0.091 4.091 29 C -0.068 4.068 30 H 0.224 0.776 31 H 0.129 0.871 32 H -0.181 1.181 33 H -0.179 1.179 34 H 0.196 0.804 35 H 0.260 0.740 36 H 0.154 0.846 37 H 0.238 0.762 38 H 0.098 0.902 39 H 0.116 0.884 40 H 0.162 0.838 41 H 0.167 0.833 42 H 0.161 0.839 43 H 0.120 0.880 44 H 0.100 0.900 45 H 0.143 0.857 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.067 5.080 0.168 5.193 hybrid contribution -0.110 -0.842 -0.269 0.890 sum 0.958 4.238 -0.100 4.346 Atomic orbital electron populations 1.86506 1.17406 1.81750 1.49030 1.24328 0.84770 1.08857 0.96160 0.95271 0.80751 0.77364 0.88036 1.20739 1.10830 0.92129 0.98195 1.21757 0.99689 0.94356 0.89316 1.41722 1.54655 1.04012 1.18203 1.18073 1.03273 0.86320 0.94841 1.20078 0.99385 0.88080 1.00104 1.19388 1.05256 0.92213 0.95813 1.18148 0.77183 0.84517 0.84590 1.90800 1.44288 1.86114 1.20035 1.45552 1.64418 1.05258 1.20931 1.21835 0.98692 0.80694 0.97260 0.87285 1.23602 0.98352 1.00799 0.95504 1.21702 0.96497 0.92179 0.99159 0.87616 1.19314 0.94206 0.95164 0.92538 1.21068 1.03659 0.91450 1.02035 1.17250 0.96532 0.86703 0.87844 1.91562 1.90231 1.64973 1.63973 1.21088 1.02823 1.01777 0.96041 1.17279 0.91561 0.93239 0.86344 1.91561 1.68808 1.92953 1.57459 1.21123 1.00586 0.95391 1.00902 1.23453 0.94559 0.99428 0.99872 1.20671 1.00632 0.97316 0.94707 1.20206 0.98723 0.90501 0.99680 1.19180 1.00923 0.93083 0.93605 0.77565 0.87139 1.18088 1.17874 0.80419 0.73976 0.84580 0.76202 0.90191 0.88381 0.83753 0.83338 0.83920 0.88020 0.90009 0.85698 0.85207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.14 12.88 -35.23 -0.45 -0.31 16 2 C -0.03 0.03 3.06 36.01 0.11 0.14 16 3 Si 0.68 -1.55 30.75 -169.99 -5.23 -6.78 16 4 C -0.21 0.09 5.57 -102.74 -0.57 -0.48 16 5 C 0.08 -0.19 10.43 -16.78 -0.18 -0.37 16 6 N -0.58 1.08 6.06 -10.68 -0.06 1.01 16 7 C 0.08 0.07 7.26 -84.00 -0.61 -0.54 16 8 C -0.06 -0.08 9.61 -39.03 -0.37 -0.46 16 9 C -0.12 -0.16 5.87 -104.95 -0.62 -0.77 16 10 C 0.57 1.18 7.76 -12.46 -0.10 1.08 16 11 O -0.54 -3.02 15.91 5.29 0.08 -2.94 16 12 N -0.71 0.78 5.21 -54.04 -0.28 0.50 16 13 C 0.12 -0.18 4.32 -67.11 -0.29 -0.47 16 14 H 0.11 0.03 7.47 -51.93 -0.39 -0.36 16 15 C -0.14 0.30 7.25 -25.92 -0.19 0.11 16 16 C -0.08 0.23 3.86 -90.96 -0.35 -0.12 16 17 H 0.11 -0.44 8.09 -51.93 -0.42 -0.86 16 18 C -0.01 0.02 5.29 -104.64 -0.55 -0.54 16 19 C -0.16 0.14 8.57 -39.51 -0.34 -0.20 16 20 C 0.14 0.09 7.30 -39.43 -0.29 -0.19 16 21 F -0.13 -0.25 17.27 2.25 0.04 -0.21 16 22 C -0.20 -0.12 10.01 -39.45 -0.39 -0.51 16 23 C 0.14 0.10 7.30 -39.43 -0.29 -0.19 16 24 F -0.13 -0.25 17.27 2.25 0.04 -0.21 16 25 C -0.16 0.13 9.69 -39.51 -0.38 -0.25 16 26 C -0.14 0.43 7.29 -25.92 -0.19 0.24 16 27 C -0.11 0.04 9.46 -39.56 -0.37 -0.33 16 28 C -0.07 -0.04 10.03 -39.69 -0.40 -0.44 16 29 C -0.06 -0.08 6.35 -105.04 -0.67 -0.75 16 30 H 0.38 -1.56 8.70 45.56 0.40 -1.16 16 31 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 32 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 33 H -0.25 -0.35 7.11 56.52 0.40 0.06 16 34 H 0.18 -1.10 6.35 -52.49 -0.33 -1.43 16 35 H 0.42 -1.93 8.96 -40.82 -0.37 -2.29 16 36 H 0.14 0.18 7.62 -52.48 -0.40 -0.22 16 37 H 0.40 -1.42 6.69 -40.82 -0.27 -1.69 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.10 -0.24 6.32 -51.93 -0.33 -0.57 16 40 H 0.14 -0.33 6.67 -52.49 -0.35 -0.68 16 41 H 0.15 -0.06 8.06 -52.49 -0.42 -0.48 16 42 H 0.14 -0.36 8.05 -52.49 -0.42 -0.78 16 43 H 0.10 -0.34 7.71 -51.93 -0.40 -0.74 16 44 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 45 H 0.13 -0.41 6.36 -52.49 -0.33 -0.74 16 46 H 0.13 -0.06 8.06 -52.49 -0.42 -0.49 16 LS Contribution 395.20 15.07 5.96 5.96 Total: 0.00 -9.92 395.20 -11.87 -21.79 By element: Atomic # 1 Polarization: -8.84 SS G_CDS: -4.92 Total: -13.76 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -7.04 Total: -5.04 kcal Atomic # 7 Polarization: 1.86 SS G_CDS: -0.35 Total: 1.51 kcal Atomic # 8 Polarization: -2.88 SS G_CDS: -0.37 Total: -3.25 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.08 Total: -0.42 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.23 Total: -6.78 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -9.92 -11.87 -21.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.890 kcal (2) G-P(sol) polarization free energy of solvation -9.922 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.868 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.790 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.680 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds