Wall clock time and date at job start Mon Mar 8 2021 02:25:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86299 * 109.47098 * 2 1 4 4 C 1.50697 * 109.47170 * 120.00107 * 2 1 3 5 5 C 1.37813 * 119.94359 * 15.01941 * 4 2 1 6 6 C 1.39664 * 119.88359 * 179.97438 * 5 4 2 7 7 C 1.47724 * 120.12189 * 179.97438 * 6 5 4 8 8 O 1.21566 * 119.99706 * 0.02562 * 7 6 5 9 9 N 1.34771 * 120.00098 * 180.02562 * 7 6 5 10 10 C 1.46503 * 119.99908 * 180.02562 * 9 7 6 11 11 H 1.08995 * 112.84869 * 25.33421 * 10 9 7 12 12 C 1.53783 * 113.61058 * 156.52893 * 10 9 7 13 13 C 1.53781 * 87.07792 * 89.12034 * 12 10 9 14 14 H 1.09001 * 113.61108 * 270.87546 * 13 12 10 15 15 C 1.50699 * 113.61654 * 140.06254 * 13 12 10 16 16 C 1.38204 * 119.97679 * 299.72681 * 15 13 12 17 17 C 1.38471 * 120.02948 * 179.72463 * 16 15 13 18 18 F 1.35105 * 120.01836 * 180.29323 * 17 16 15 19 19 C 1.38427 * 119.97267 * 0.54634 * 17 16 15 20 20 C 1.38420 * 119.94530 * 359.72489 * 19 17 16 21 21 F 1.35100 * 120.00796 * 179.97438 * 20 19 17 22 22 C 1.38210 * 119.97688 * 119.99473 * 15 13 12 23 23 C 1.53785 * 113.61542 * 254.13813 * 10 9 7 24 24 C 1.39634 * 119.76284 * 0.02562 * 6 5 4 25 25 C 1.37861 * 119.87633 * 0.02562 * 24 6 5 26 26 C 1.38628 * 120.11975 * 359.97438 * 25 24 6 27 27 F 1.35100 * 119.87710 * 180.27862 * 26 25 24 28 28 H 0.96699 * 114.00032 * 299.99772 * 1 2 3 29 29 H 1.09000 * 109.47193 * 240.00461 * 2 1 3 30 30 H 1.48501 * 110.00062 * 300.00301 * 3 2 1 31 31 H 1.48499 * 110.00303 * 61.31826 * 3 2 1 32 32 H 1.08000 * 120.05640 * 0.02562 * 5 4 2 33 33 H 0.97003 * 119.99966 * 0.02562 * 9 7 6 34 34 H 1.09004 * 113.60734 * 203.66126 * 12 10 9 35 35 H 1.08988 * 113.61973 * 334.48469 * 12 10 9 36 36 H 1.08001 * 119.98303 * 359.97438 * 16 15 13 37 37 H 1.07995 * 120.02449 * 179.70542 * 19 17 16 38 38 H 1.08004 * 119.98778 * 0.02562 * 22 15 13 39 39 H 1.08999 * 113.61193 * 25.42870 * 23 10 9 40 40 H 1.08995 * 113.60937 * 156.33452 * 23 10 9 41 41 H 1.08003 * 120.06111 * 179.97438 * 24 6 5 42 42 H 1.08000 * 119.93433 * 180.02562 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.0732 -1.4949 1.9703 6 6 1.5402 -2.1532 3.1101 7 6 0.6248 -2.9950 3.9074 8 8 -0.5372 -3.1162 3.5715 9 7 1.0779 -3.6287 5.0071 10 6 0.1702 -4.4640 5.7975 11 1 -0.6642 -4.8522 5.2134 12 6 0.8898 -5.5367 6.6320 13 6 0.9860 -4.4879 7.7526 14 1 1.8844 -3.8730 7.6992 15 6 0.7436 -5.0513 9.1292 16 6 -0.4657 -5.6505 9.4270 17 6 -0.6875 -6.1736 10.6897 18 9 -1.8675 -6.7646 10.9788 19 6 0.2984 -6.0861 11.6575 20 6 1.5071 -5.4807 11.3598 21 9 2.4700 -5.3942 12.3035 22 6 1.7287 -4.9634 10.0946 23 6 -0.2554 -3.8224 7.1287 24 6 2.8753 -2.0119 3.4940 25 6 3.7249 -1.2238 2.7473 26 6 3.2560 -0.5727 1.6168 27 9 4.0942 0.1939 0.8854 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5879 2.4586 1.2242 32 1 0.0416 -1.6012 1.6687 33 1 2.0051 -3.5318 5.2754 34 1 0.2591 -6.3890 6.8847 35 1 1.8565 -5.8316 6.2241 36 1 -1.2365 -5.7144 8.6732 37 1 0.1246 -6.4896 12.6440 38 1 2.6716 -4.4907 9.8623 39 1 -0.2117 -2.7333 7.1221 40 1 -1.1985 -4.2070 7.5168 41 1 3.2414 -2.5185 4.3748 42 1 4.7578 -1.1142 3.0431 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:25:20 Heat of formation + Delta-G solvation = -116.298101 kcal Electronic energy + Delta-G solvation = -30912.075006 eV Core-core repulsion = 25989.110642 eV Total energy + Delta-G solvation = -4922.964364 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.107 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -50.41856 -50.06206 -50.04031 -41.93661 -40.98153 -39.78678 -38.67007 -37.81280 -34.86419 -32.93000 -32.28875 -31.71357 -31.38827 -27.37971 -26.98924 -26.76224 -25.10213 -24.00131 -23.38794 -23.08710 -21.78203 -20.61656 -19.47576 -19.06001 -18.65503 -18.19332 -18.00550 -17.86012 -17.55294 -17.16646 -17.06841 -17.04281 -16.72729 -16.34635 -16.29538 -16.17882 -15.89039 -15.71974 -15.57084 -15.36175 -15.27343 -14.84662 -14.45961 -14.25304 -14.23586 -13.92671 -13.84416 -13.74334 -13.46173 -13.20811 -13.01578 -12.89401 -12.84780 -12.46384 -12.31254 -11.94148 -11.91283 -11.53933 -11.23054 -11.02490 -10.32998 -10.16007 -10.01529 -9.88668 -9.85212 -4.81182 -0.61255 -0.19745 -0.16787 -0.12314 1.15932 1.53665 1.58763 1.81977 1.94245 2.15081 2.47934 2.70640 2.82107 3.06833 3.09599 3.22116 3.22720 3.37125 3.39202 3.44795 3.52434 3.63025 3.66582 3.75420 3.78765 3.85629 3.94737 3.98363 4.32623 4.35661 4.40942 4.47662 4.54218 4.59116 4.62229 4.64518 4.68561 4.71691 4.77156 4.83052 4.87368 4.87673 4.90998 4.95882 5.15097 5.36199 5.46675 5.62337 6.25014 6.25947 7.00919 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.074 4.074 3 Si 0.676 3.324 4 C -0.154 4.154 5 C -0.023 4.023 6 C -0.142 4.142 7 C 0.564 3.436 8 O -0.526 6.526 9 N -0.710 5.710 10 C 0.120 3.880 11 H 0.110 0.890 12 C -0.134 4.134 13 C -0.077 4.077 14 H 0.105 0.895 15 C -0.013 4.013 16 C -0.163 4.163 17 C 0.137 3.863 18 F -0.129 7.129 19 C -0.197 4.197 20 C 0.135 3.865 21 F -0.129 7.129 22 C -0.161 4.161 23 C -0.144 4.144 24 C -0.061 4.061 25 C -0.149 4.149 26 C 0.124 3.876 27 F -0.104 7.104 28 H 0.378 0.622 29 H 0.128 0.872 30 H -0.248 1.248 31 H -0.256 1.256 32 H 0.154 0.846 33 H 0.401 0.599 34 H 0.102 0.898 35 H 0.082 0.918 36 H 0.145 0.855 37 H 0.149 0.851 38 H 0.143 0.857 39 H 0.079 0.921 40 H 0.099 0.901 41 H 0.138 0.862 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.415 -0.065 1.116 5.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.183 4.183 3 Si 0.575 3.425 4 C -0.155 4.155 5 C -0.042 4.042 6 C -0.145 4.145 7 C 0.352 3.648 8 O -0.402 6.402 9 N -0.362 5.362 10 C 0.015 3.985 11 H 0.128 0.872 12 C -0.172 4.172 13 C -0.095 4.095 14 H 0.123 0.877 15 C -0.013 4.013 16 C -0.182 4.182 17 C 0.117 3.883 18 F -0.107 7.107 19 C -0.217 4.217 20 C 0.116 3.884 21 F -0.108 7.108 22 C -0.180 4.180 23 C -0.182 4.182 24 C -0.079 4.079 25 C -0.168 4.168 26 C 0.104 3.896 27 F -0.082 7.082 28 H 0.226 0.774 29 H 0.146 0.854 30 H -0.173 1.173 31 H -0.180 1.180 32 H 0.172 0.828 33 H 0.237 0.763 34 H 0.121 0.879 35 H 0.100 0.900 36 H 0.163 0.837 37 H 0.167 0.833 38 H 0.161 0.839 39 H 0.098 0.902 40 H 0.117 0.883 41 H 0.156 0.844 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 4.453 0.374 0.344 4.482 hybrid contribution -0.371 -0.234 1.050 1.138 sum 4.082 0.140 1.394 4.316 Atomic orbital electron populations 1.86613 1.17020 1.80100 1.49527 1.24945 0.84584 1.11193 0.97566 0.94768 0.92720 0.73533 0.81476 1.20394 0.92955 1.02025 1.00151 1.20979 1.00973 0.91106 0.91150 1.19946 0.94252 1.02159 0.98158 1.18118 0.87357 0.79255 0.80089 1.90832 1.17661 1.62225 1.69468 1.45560 1.13936 1.49594 1.27066 1.21865 0.93777 0.91285 0.91599 0.87238 1.23440 1.02278 0.96925 0.94576 1.21741 1.00190 0.97999 0.89559 0.87661 1.19296 0.91927 0.95120 0.94982 1.21069 0.99174 1.01971 0.95997 1.17256 0.81792 0.95669 0.93567 1.91569 1.44066 1.81164 1.93903 1.21102 0.93188 1.05648 1.01743 1.17278 0.85860 0.98731 0.86532 1.91564 1.61603 1.94061 1.63531 1.21112 1.01486 1.03721 0.91689 1.23645 0.97755 1.01572 0.95244 1.21169 0.91850 0.96215 0.98697 1.21092 1.01871 0.99012 0.94794 1.17655 0.87247 0.93213 0.91477 1.91202 1.69693 1.71498 1.75838 0.77383 0.85426 1.17299 1.17990 0.82832 0.76320 0.87921 0.89967 0.83747 0.83305 0.83936 0.90202 0.88297 0.84434 0.83244 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.54 11.64 -35.23 -0.41 -0.95 16 2 C -0.07 0.02 2.96 36.00 0.11 0.12 16 3 Si 0.68 -0.15 29.58 -169.99 -5.03 -5.18 16 4 C -0.15 0.07 5.13 -104.62 -0.54 -0.47 16 5 C -0.02 -0.01 8.78 -39.20 -0.34 -0.35 16 6 C -0.14 0.11 5.87 -104.97 -0.62 -0.51 16 7 C 0.56 0.28 7.77 -12.39 -0.10 0.19 16 8 O -0.53 -2.38 15.96 5.31 0.08 -2.30 16 9 N -0.71 1.92 5.21 -54.00 -0.28 1.64 16 10 C 0.12 -0.31 4.30 -67.11 -0.29 -0.60 16 11 H 0.11 -0.08 7.50 -51.93 -0.39 -0.47 16 12 C -0.13 0.57 7.29 -25.92 -0.19 0.38 16 13 C -0.08 0.31 3.86 -90.82 -0.35 -0.04 16 14 H 0.11 -0.57 8.09 -51.93 -0.42 -0.99 16 15 C -0.01 0.03 5.29 -104.64 -0.55 -0.52 16 16 C -0.16 0.24 8.61 -39.51 -0.34 -0.10 16 17 C 0.14 0.02 7.30 -39.43 -0.29 -0.27 16 18 F -0.13 -0.19 17.27 2.25 0.04 -0.15 16 19 C -0.20 -0.01 10.01 -39.44 -0.39 -0.41 16 20 C 0.14 0.01 7.30 -39.43 -0.29 -0.28 16 21 F -0.13 -0.18 17.27 2.25 0.04 -0.14 16 22 C -0.16 0.26 9.69 -39.51 -0.38 -0.13 16 23 C -0.14 0.44 7.27 -25.78 -0.19 0.25 16 24 C -0.06 0.20 9.54 -39.20 -0.37 -0.17 16 25 C -0.15 0.45 10.01 -39.58 -0.40 0.06 16 26 C 0.12 -0.18 6.66 -39.28 -0.26 -0.44 16 27 F -0.10 0.18 13.71 2.25 0.03 0.21 16 28 H 0.38 -0.67 8.43 45.56 0.38 -0.29 16 29 H 0.13 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 31 H -0.26 -0.49 7.11 56.52 0.40 -0.08 16 32 H 0.15 0.17 6.66 -52.49 -0.35 -0.18 16 33 H 0.40 -2.23 6.73 -40.82 -0.27 -2.50 16 34 H 0.10 -0.43 7.73 -51.93 -0.40 -0.83 16 35 H 0.08 -0.40 8.14 -51.94 -0.42 -0.82 16 36 H 0.14 -0.42 6.65 -52.49 -0.35 -0.77 16 37 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.14 -0.48 8.05 -52.48 -0.42 -0.90 16 39 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.10 -0.32 6.31 -51.93 -0.33 -0.64 16 41 H 0.14 -0.91 6.40 -52.48 -0.34 -1.24 16 42 H 0.15 -0.79 8.06 -52.49 -0.42 -1.21 16 LS Contribution 365.40 15.07 5.51 5.51 Total: 0.00 -7.52 365.40 -9.99 -17.51 By element: Atomic # 1 Polarization: -8.69 SS G_CDS: -4.19 Total: -12.88 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: -5.78 Total: -3.28 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -0.28 Total: 1.64 kcal Atomic # 8 Polarization: -2.92 SS G_CDS: -0.33 Total: -3.24 kcal Atomic # 9 Polarization: -0.19 SS G_CDS: 0.11 Total: -0.08 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.03 Total: -5.18 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -7.52 -9.99 -17.51 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.792 kcal (2) G-P(sol) polarization free energy of solvation -7.518 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.310 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.988 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.506 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds