Wall clock time and date at job start Mon Mar 8 2021 02:27:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50699 * 109.47152 * 239.99653 * 2 1 3 5 5 C 1.32697 * 124.68456 * 299.72204 * 4 2 1 6 6 C 1.44504 * 113.09772 * 179.81840 * 5 4 2 7 7 C 1.47046 * 123.49447 * 180.21452 * 6 5 4 8 8 O 1.21650 * 120.00085 * 180.25283 * 7 6 5 9 9 N 1.34777 * 119.99635 * 0.25737 * 7 6 5 10 10 C 1.46503 * 119.99784 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.85080 * 336.19817 * 10 9 7 12 12 C 1.53781 * 113.61243 * 107.50192 * 10 9 7 13 13 C 1.53780 * 87.08201 * 89.11603 * 12 10 9 14 14 H 1.09004 * 113.61305 * 270.88185 * 13 12 10 15 15 C 1.50703 * 113.61324 * 139.98304 * 13 12 10 16 16 C 1.38208 * 119.97161 * 322.22728 * 15 13 12 17 17 C 1.38474 * 120.02023 * 179.73072 * 16 15 13 18 18 F 1.35097 * 120.01468 * 180.29215 * 17 16 15 19 19 C 1.38421 * 119.97718 * 0.54495 * 17 16 15 20 20 C 1.38421 * 119.94750 * 359.72841 * 19 17 16 21 21 F 1.35099 * 120.01289 * 179.97438 * 20 19 17 22 22 C 1.38208 * 119.97426 * 142.50247 * 15 13 12 23 23 C 1.53775 * 87.08128 * 25.43287 * 13 12 10 24 24 C 1.36229 * 113.01438 * 0.46694 * 6 5 4 25 25 Cl 1.73598 * 124.60540 * 179.78491 * 24 6 5 26 26 S 1.70439 * 110.78875 * 359.75224 * 24 6 5 27 27 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 28 28 H 1.09008 * 109.46477 * 119.99697 * 2 1 3 29 29 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 30 30 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 31 31 H 1.08001 * 123.44778 * 359.96765 * 5 4 2 32 32 H 0.96994 * 120.00116 * 359.97438 * 9 7 6 33 33 H 1.09004 * 113.61485 * 203.66513 * 12 10 9 34 34 H 1.09001 * 113.61445 * 334.56656 * 12 10 9 35 35 H 1.07995 * 119.99394 * 359.97438 * 16 15 13 36 36 H 1.07993 * 120.02659 * 179.70727 * 19 17 16 37 37 H 1.08005 * 119.98973 * 0.02562 * 22 15 13 38 38 H 1.09001 * 113.61596 * 220.01865 * 23 13 12 39 39 H 1.08997 * 113.69198 * 89.12640 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6730 -1.9773 -1.5293 6 6 2.2771 -2.4012 -2.7716 7 6 2.1344 -3.7572 -3.3222 8 8 2.6750 -4.0472 -4.3727 9 7 1.4047 -4.6788 -2.6629 10 6 1.2620 -6.0296 -3.2116 11 1 1.4127 -6.0663 -4.2905 12 6 2.0582 -7.0952 -2.4400 13 6 0.8151 -7.2674 -1.5512 14 1 0.7991 -6.6008 -0.6890 15 6 0.5258 -8.7015 -1.1894 16 6 0.7300 -9.7030 -2.1196 17 6 0.4697 -11.0216 -1.7864 18 9 0.6750 -12.0011 -2.6939 19 6 -0.0058 -11.3353 -0.5248 20 6 -0.2153 -10.3307 0.4041 21 9 -0.6799 -10.6353 1.6356 22 6 0.0510 -9.0134 0.0706 23 6 -0.0108 -6.7540 -2.7424 24 6 2.9971 -1.4159 -3.3772 25 17 3.8507 -1.5988 -4.8777 26 16 2.9451 0.0210 -2.4621 27 1 -0.3934 0.4418 0.7650 28 1 1.7923 -0.5138 0.8901 29 1 3.5346 1.7702 0.0322 30 1 1.5616 2.4678 -1.2086 31 1 1.0708 -2.6244 -0.9087 32 1 0.9739 -4.4476 -1.8251 33 1 2.2960 -7.9778 -3.0339 34 1 2.9224 -6.6954 -1.9094 35 1 1.0964 -9.4577 -3.1054 36 1 -0.2135 -12.3629 -0.2657 37 1 -0.1128 -8.2294 0.7951 38 1 -0.8170 -6.0786 -2.4559 39 1 -0.3395 -7.5422 -3.4196 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:27:02 Heat of formation + Delta-G solvation = -67.602412 kcal Electronic energy + Delta-G solvation = -29294.433165 eV Core-core repulsion = 24572.386834 eV Total energy + Delta-G solvation = -4722.046331 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.034 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.02942 -50.00790 -41.76559 -40.55509 -39.13298 -38.53334 -37.87173 -37.08693 -34.55804 -32.13468 -31.76023 -31.38535 -27.31543 -26.91097 -26.86590 -25.48727 -23.96782 -22.99849 -22.19837 -20.87070 -20.47420 -19.37900 -18.90534 -18.64074 -18.15154 -17.87702 -17.50924 -17.14344 -17.01377 -16.75728 -16.52688 -16.31336 -16.21802 -15.96253 -15.68079 -15.43969 -15.33240 -14.89268 -14.70920 -14.51955 -14.35472 -14.23837 -14.04918 -13.76678 -13.65826 -13.16560 -13.08135 -12.96708 -12.82697 -12.51332 -12.46898 -12.24260 -12.23499 -11.97698 -11.83156 -11.46408 -10.85576 -10.64831 -10.19109 -9.97215 -9.90967 -9.84676 -9.72681 -5.44684 -0.63626 -0.20332 -0.15642 -0.12942 0.39391 0.64510 0.96793 1.06141 1.39735 1.70417 2.04983 2.18200 2.22342 2.74462 3.02490 3.15549 3.27360 3.42202 3.43907 3.49411 3.67020 3.72892 3.81771 3.82246 3.82528 3.90841 3.99203 4.10047 4.30826 4.44797 4.54161 4.59372 4.62698 4.65975 4.71956 4.73161 4.84097 4.86088 4.88889 4.91675 4.96466 5.21491 5.47650 5.66228 6.33487 6.37637 7.14934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.034 4.034 3 Si 0.669 3.331 4 C -0.190 4.190 5 C -0.066 4.066 6 C -0.160 4.160 7 C 0.581 3.419 8 O -0.514 6.514 9 N -0.708 5.708 10 C 0.122 3.878 11 H 0.110 0.890 12 C -0.144 4.144 13 C -0.077 4.077 14 H 0.105 0.895 15 C -0.012 4.012 16 C -0.163 4.163 17 C 0.136 3.864 18 F -0.129 7.129 19 C -0.198 4.198 20 C 0.135 3.865 21 F -0.129 7.129 22 C -0.161 4.161 23 C -0.135 4.135 24 C -0.110 4.110 25 Cl 0.028 6.972 26 S 0.216 5.784 27 H 0.387 0.613 28 H 0.089 0.911 29 H -0.235 1.235 30 H -0.232 1.232 31 H 0.159 0.841 32 H 0.401 0.599 33 H 0.098 0.902 34 H 0.079 0.921 35 H 0.145 0.855 36 H 0.149 0.851 37 H 0.143 0.857 38 H 0.081 0.919 39 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.149 4.427 6.639 8.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.147 4.147 3 Si 0.568 3.432 4 C -0.307 4.307 5 C -0.095 4.095 6 C -0.178 4.178 7 C 0.366 3.634 8 O -0.390 6.390 9 N -0.359 5.359 10 C 0.017 3.983 11 H 0.128 0.872 12 C -0.182 4.182 13 C -0.095 4.095 14 H 0.123 0.877 15 C -0.012 4.012 16 C -0.182 4.182 17 C 0.117 3.883 18 F -0.107 7.107 19 C -0.217 4.217 20 C 0.116 3.884 21 F -0.108 7.108 22 C -0.180 4.180 23 C -0.173 4.173 24 C -0.257 4.257 25 Cl 0.057 6.943 26 S 0.481 5.519 27 H 0.236 0.764 28 H 0.107 0.893 29 H -0.158 1.158 30 H -0.155 1.155 31 H 0.176 0.824 32 H 0.236 0.764 33 H 0.116 0.884 34 H 0.098 0.902 35 H 0.163 0.837 36 H 0.167 0.833 37 H 0.161 0.839 38 H 0.100 0.900 39 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -0.474 5.873 4.544 7.440 hybrid contribution -0.834 -2.249 0.558 2.463 sum -1.308 3.623 5.102 6.393 Atomic orbital electron populations 1.86500 1.16504 1.81845 1.50040 1.23955 0.86112 1.09732 0.94892 0.94648 0.82191 0.78084 0.88270 1.23385 1.07617 0.97892 1.01759 1.20965 0.98956 0.94996 0.94617 1.20179 1.04791 0.95414 0.97465 1.17348 0.78716 0.83268 0.84021 1.90884 1.46192 1.80050 1.21871 1.45467 1.53076 1.11017 1.26385 1.21837 0.96111 0.80664 0.99724 0.87193 1.23602 0.96899 0.99608 0.98114 1.21695 0.97849 0.91732 0.98220 0.87665 1.19312 0.94967 0.95084 0.91861 1.21072 1.04701 0.90558 1.01870 1.17252 0.99095 0.85393 0.86566 1.91564 1.92336 1.61199 1.65625 1.21091 1.06323 1.01243 0.93069 1.17277 0.97631 0.93017 0.80502 1.91561 1.85814 1.93872 1.39535 1.21115 1.03695 0.95104 0.98096 1.23449 0.96673 1.00272 0.96884 1.25572 1.02845 1.00672 0.96592 1.98441 1.73269 1.96995 1.25562 1.83466 1.47009 1.09566 1.11898 0.76416 0.89310 1.15837 1.15475 0.82393 0.76389 0.88354 0.90237 0.83748 0.83327 0.83944 0.89996 0.87987 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.43 12.83 -35.23 -0.45 0.98 16 2 C -0.03 0.09 2.94 36.01 0.11 0.20 16 3 Si 0.67 -2.04 30.91 -169.99 -5.25 -7.30 16 4 C -0.19 0.01 5.71 -36.20 -0.21 -0.19 16 5 C -0.07 0.02 9.71 -39.00 -0.38 -0.35 16 6 C -0.16 -0.31 5.98 -104.58 -0.63 -0.94 16 7 C 0.58 1.49 7.79 -12.69 -0.10 1.39 16 8 O -0.51 -3.04 14.51 5.23 0.08 -2.97 16 9 N -0.71 0.67 5.24 -54.21 -0.28 0.39 16 10 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 11 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 12 C -0.14 0.30 7.25 -25.92 -0.19 0.12 16 13 C -0.08 0.24 3.85 -90.96 -0.35 -0.11 16 14 H 0.11 -0.46 8.09 -51.93 -0.42 -0.88 16 15 C -0.01 0.02 5.29 -104.64 -0.55 -0.53 16 16 C -0.16 0.14 8.58 -39.51 -0.34 -0.20 16 17 C 0.14 0.09 7.30 -39.43 -0.29 -0.20 16 18 F -0.13 -0.25 17.27 2.25 0.04 -0.21 16 19 C -0.20 -0.10 10.01 -39.45 -0.39 -0.49 16 20 C 0.14 0.07 7.30 -39.43 -0.29 -0.21 16 21 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 22 C -0.16 0.16 9.69 -39.51 -0.38 -0.22 16 23 C -0.13 0.42 7.29 -25.92 -0.19 0.23 16 24 C -0.11 -0.31 6.87 30.01 0.21 -0.11 16 25 Cl 0.03 0.11 27.20 -51.86 -1.41 -1.30 16 26 S 0.22 0.26 20.17 -107.50 -2.17 -1.91 16 27 H 0.39 -2.92 8.74 45.56 0.40 -2.52 16 28 H 0.09 -0.43 7.96 -51.92 -0.41 -0.85 16 29 H -0.23 0.21 7.11 56.52 0.40 0.61 16 30 H -0.23 -0.01 7.11 56.52 0.40 0.39 16 31 H 0.16 -0.50 7.10 -52.49 -0.37 -0.87 16 32 H 0.40 -1.40 7.24 -40.82 -0.30 -1.70 16 33 H 0.10 -0.23 6.32 -51.93 -0.33 -0.56 16 34 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.14 -0.33 6.67 -52.49 -0.35 -0.68 16 36 H 0.15 -0.08 8.06 -52.49 -0.42 -0.50 16 37 H 0.14 -0.39 8.06 -52.48 -0.42 -0.81 16 38 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 39 H 0.10 -0.33 7.72 -51.93 -0.40 -0.73 16 LS Contribution 369.19 15.07 5.56 5.56 Total: 0.00 -8.12 369.19 -11.57 -19.69 By element: Atomic # 1 Polarization: -7.21 SS G_CDS: -3.46 Total: -10.67 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -4.26 Total: -2.09 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.28 Total: 0.39 kcal Atomic # 8 Polarization: -1.61 SS G_CDS: -0.38 Total: -1.99 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.08 Total: -0.40 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: -5.25 Total: -7.30 kcal Atomic # 16 Polarization: 0.26 SS G_CDS: -2.17 Total: -1.91 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.41 Total: -1.30 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -8.12 -11.57 -19.69 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.909 kcal (2) G-P(sol) polarization free energy of solvation -8.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.694 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds