Wall clock time and date at job start Mon Mar 8 2021 02:27:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47406 * 2 1 4 4 C 1.50699 * 109.46801 * 239.99751 * 2 1 3 5 5 C 1.38245 * 119.97114 * 120.02636 * 4 2 1 6 6 C 1.38291 * 120.11438 * 179.97438 * 5 4 2 7 7 C 1.38123 * 120.05400 * 359.77072 * 6 5 4 8 8 C 1.38757 * 119.94134 * 0.50428 * 7 6 5 9 9 O 1.35904 * 120.05232 * 179.75012 * 8 7 6 10 10 C 1.42900 * 117.00116 * 359.72210 * 9 8 7 11 11 C 1.52995 * 109.47172 * 180.02562 * 10 9 8 12 12 C 1.50701 * 109.47243 * 180.02562 * 11 10 9 13 13 O 1.21283 * 119.99974 * 359.97438 * 12 11 10 14 14 N 1.34776 * 119.99867 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99524 * 179.97438 * 14 12 11 16 16 H 1.08998 * 112.85555 * 336.19819 * 15 14 12 17 17 C 1.53958 * 113.61000 * 107.47467 * 15 14 12 18 18 C 1.53776 * 87.02290 * 89.19920 * 17 15 14 19 19 H 1.09010 * 113.61054 * 270.77082 * 18 17 15 20 20 C 1.50696 * 113.62046 * 139.95113 * 18 17 15 21 21 C 1.38203 * 119.97590 * 140.86015 * 20 18 17 22 22 C 1.38476 * 120.02404 * 180.02562 * 21 20 18 23 23 F 1.35096 * 120.01244 * 179.97438 * 22 21 20 24 24 C 1.38423 * 119.97577 * 359.97279 * 22 21 20 25 25 C 1.38420 * 119.94664 * 0.26233 * 24 22 21 26 26 F 1.35104 * 120.01022 * 179.72453 * 25 24 22 27 27 C 1.38207 * 119.97109 * 320.84315 * 20 18 17 28 28 C 1.53781 * 87.17426 * 25.35920 * 18 17 15 29 29 C 1.38167 * 119.97733 * 300.00098 * 4 2 1 30 30 H 0.96698 * 113.99779 * 59.99955 * 1 2 3 31 31 H 1.08997 * 109.46995 * 120.00235 * 2 1 3 32 32 H 1.48501 * 110.00130 * 298.68247 * 3 2 1 33 33 H 1.48503 * 110.00066 * 60.00104 * 3 2 1 34 34 H 1.08001 * 119.94188 * 359.97438 * 5 4 2 35 35 H 1.08003 * 119.97131 * 180.02562 * 6 5 4 36 36 H 1.07998 * 120.02794 * 180.27808 * 7 6 5 37 37 H 1.09004 * 109.46910 * 60.00256 * 10 9 8 38 38 H 1.09000 * 109.47065 * 300.00652 * 10 9 8 39 39 H 1.08996 * 109.47408 * 59.99786 * 11 10 9 40 40 H 1.09000 * 109.47249 * 300.00039 * 11 10 9 41 41 H 0.96993 * 120.00253 * 0.02562 * 14 12 11 42 42 H 1.08998 * 113.66680 * 334.66688 * 17 15 14 43 43 H 1.09004 * 113.61023 * 203.72028 * 17 15 14 44 44 H 1.07996 * 119.99270 * 359.97438 * 21 20 18 45 45 H 1.08002 * 120.02325 * 179.97438 * 24 22 21 46 46 H 1.08002 * 119.99155 * 0.02562 * 27 20 18 47 47 H 1.09003 * 113.61252 * 89.16128 * 28 18 17 48 48 H 1.09006 * 113.61677 * 219.98171 * 28 18 17 49 49 H 1.07999 * 120.02245 * 0.02562 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7265 -0.0383 -2.1398 6 6 3.1894 -0.6875 -3.2697 7 6 2.8621 -2.0112 -3.4899 8 6 2.0594 -2.6865 -2.5815 9 8 1.7318 -3.9874 -2.7985 10 6 2.2436 -4.5961 -3.9858 11 6 1.7722 -6.0498 -4.0576 12 6 2.3126 -6.6918 -5.3094 13 8 3.0061 -6.0497 -6.0695 14 7 2.0252 -7.9796 -5.5842 15 6 2.5500 -8.6035 -6.8013 16 1 2.7871 -7.8788 -7.5802 17 6 3.6775 -9.6181 -6.5373 18 6 2.5775 -10.6843 -6.4029 19 1 2.1945 -10.7909 -5.3879 20 6 2.9359 -12.0046 -7.0348 21 6 2.5816 -13.1867 -6.4127 22 6 2.9109 -14.4005 -6.9922 23 9 2.5649 -15.5559 -6.3836 24 6 3.5947 -14.4295 -8.1954 25 6 3.9533 -13.2449 -8.8151 26 9 4.6257 -13.2717 -9.9867 27 6 3.6184 -12.0323 -8.2363 28 6 1.7060 -9.7888 -7.2992 29 6 1.5971 -2.0333 -1.4486 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5139 0.8899 32 1 1.5880 2.4585 -1.2242 33 1 1.5616 2.4678 1.2085 34 1 2.9866 0.9957 -1.9676 35 1 3.8108 -0.1603 -3.9784 36 1 3.2276 -2.5191 -4.3701 37 1 3.3332 -4.5675 -3.9679 38 1 1.8802 -4.0530 -4.8582 39 1 0.6828 -6.0780 -4.0756 40 1 2.1354 -6.5931 -3.1852 41 1 1.4703 -8.4930 -4.9765 42 1 4.2232 -9.4347 -5.6117 43 1 4.3341 -9.7737 -7.3933 44 1 2.0484 -13.1639 -5.4738 45 1 3.8523 -15.3757 -8.6479 46 1 3.8949 -11.1079 -8.7216 47 1 1.8226 -9.9911 -8.3639 48 1 0.6621 -9.7440 -6.9887 49 1 0.9759 -2.5579 -0.7378 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:27:46 Heat of formation + Delta-G solvation = -116.115765 kcal Electronic energy + Delta-G solvation = -33476.594114 eV Core-core repulsion = 28393.334202 eV Total energy + Delta-G solvation = -5083.259912 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.148 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -50.06230 -50.04180 -41.84022 -41.27567 -40.43271 -39.19677 -38.71237 -37.33668 -34.75501 -33.36590 -32.45009 -32.00909 -31.43610 -30.76418 -27.22847 -26.98919 -26.75617 -25.34231 -24.02246 -23.65274 -23.11753 -22.21911 -21.57842 -20.56270 -19.42436 -19.02811 -18.22909 -18.17921 -17.74786 -17.56773 -17.52582 -17.21059 -17.12254 -17.04766 -16.86182 -16.71216 -16.34662 -16.29461 -16.07866 -15.75728 -15.62174 -15.37006 -15.27540 -14.92360 -14.65090 -14.40085 -14.37128 -14.06078 -13.98057 -13.81246 -13.71793 -13.27931 -13.16623 -13.05741 -12.97566 -12.87024 -12.83871 -12.40009 -12.30660 -11.93243 -11.91305 -11.84119 -11.55174 -11.54847 -11.09963 -10.64757 -10.29324 -10.01298 -9.89837 -9.88444 -9.22762 -4.94207 -0.19785 -0.16849 0.23573 0.43264 1.27586 1.40796 1.58978 1.62032 1.97030 2.15089 2.37417 2.69626 2.70692 3.09476 3.22258 3.36825 3.37557 3.39591 3.44414 3.61292 3.63904 3.65638 3.77316 3.77836 3.79930 3.85561 3.89079 3.94758 4.06519 4.21910 4.25388 4.33067 4.37246 4.46937 4.52550 4.53282 4.54278 4.58595 4.59094 4.63842 4.68530 4.70490 4.76372 4.84040 4.86718 4.88852 4.99788 5.15191 5.28732 5.36802 5.40195 5.46543 5.62309 5.70221 6.22426 6.38085 6.40537 6.98872 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.688 3.312 4 C -0.081 4.081 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.524 3.476 13 O -0.534 6.534 14 N -0.712 5.712 15 C 0.119 3.881 16 H 0.109 0.891 17 C -0.143 4.143 18 C -0.077 4.077 19 H 0.106 0.894 20 C -0.013 4.013 21 C -0.161 4.161 22 C 0.136 3.864 23 F -0.129 7.129 24 C -0.197 4.197 25 C 0.137 3.863 26 F -0.129 7.129 27 C -0.163 4.163 28 C -0.135 4.135 29 C -0.126 4.126 30 H 0.376 0.624 31 H 0.120 0.880 32 H -0.260 1.260 33 H -0.257 1.257 34 H 0.129 0.871 35 H 0.131 0.869 36 H 0.132 0.868 37 H 0.073 0.927 38 H 0.072 0.928 39 H 0.108 0.892 40 H 0.108 0.892 41 H 0.404 0.596 42 H 0.079 0.921 43 H 0.098 0.902 44 H 0.143 0.857 45 H 0.149 0.851 46 H 0.144 0.856 47 H 0.101 0.899 48 H 0.081 0.919 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.264 -0.470 0.431 0.690 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.185 4.185 3 Si 0.589 3.411 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.311 3.689 13 O -0.411 6.411 14 N -0.364 5.364 15 C 0.014 3.986 16 H 0.127 0.873 17 C -0.182 4.182 18 C -0.095 4.095 19 H 0.124 0.876 20 C -0.013 4.013 21 C -0.180 4.180 22 C 0.116 3.884 23 F -0.107 7.107 24 C -0.217 4.217 25 C 0.117 3.883 26 F -0.107 7.107 27 C -0.182 4.182 28 C -0.173 4.173 29 C -0.144 4.144 30 H 0.224 0.776 31 H 0.138 0.862 32 H -0.185 1.185 33 H -0.182 1.182 34 H 0.146 0.854 35 H 0.149 0.851 36 H 0.150 0.850 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.126 0.874 40 H 0.127 0.873 41 H 0.239 0.761 42 H 0.098 0.902 43 H 0.116 0.884 44 H 0.161 0.839 45 H 0.167 0.833 46 H 0.162 0.838 47 H 0.120 0.880 48 H 0.100 0.900 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.536 0.348 0.521 0.824 hybrid contribution -1.112 -0.984 -0.616 1.608 sum -0.576 -0.636 -0.096 0.863 Atomic orbital electron populations 1.86604 1.17571 1.80002 1.49316 1.25075 0.84069 1.11093 0.98312 0.94888 0.91754 0.74202 0.80209 1.20073 0.97660 0.93833 0.96553 1.20931 1.00787 1.00035 0.95456 1.20932 0.97848 0.93678 0.96664 1.21398 1.03005 0.96487 1.01168 1.18951 0.94673 0.83185 0.94506 1.85974 1.71168 1.22799 1.43079 1.22411 0.99378 0.92027 0.86314 1.21468 1.03964 0.95491 0.97236 1.20311 0.80031 0.81621 0.86977 1.90762 1.37778 1.62630 1.49884 1.45625 1.53706 1.12103 1.24958 1.21895 0.94578 0.94394 0.87768 0.87309 1.23620 0.96496 0.94282 1.03792 1.21695 0.98272 0.89821 0.99701 0.87616 1.19302 0.94656 0.94364 0.93016 1.21120 1.04139 0.90390 1.02360 1.17283 0.97528 0.81939 0.91640 1.91563 1.89870 1.47060 1.82254 1.21101 1.04289 0.99464 0.96823 1.17252 0.94555 0.93552 0.82935 1.91568 1.77343 1.97304 1.44490 1.21060 1.02590 0.97366 0.97210 1.23449 0.99280 0.93731 1.00836 1.20237 1.03176 0.93987 0.97027 0.77597 0.86200 1.18479 1.18217 0.85392 0.85143 0.84971 0.90849 0.90929 0.87363 0.87346 0.76104 0.90234 0.88375 0.83930 0.83292 0.83786 0.88022 0.89985 0.84825 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.79 12.77 -35.23 -0.45 -1.24 16 2 C -0.08 0.00 2.82 36.01 0.10 0.10 16 3 Si 0.69 -0.57 29.79 -169.99 -5.06 -5.64 16 4 C -0.08 -0.06 5.39 -104.65 -0.56 -0.62 16 5 C -0.15 0.00 8.67 -39.56 -0.34 -0.35 16 6 C -0.07 -0.01 10.04 -39.60 -0.40 -0.41 16 7 C -0.20 -0.20 9.04 -39.43 -0.36 -0.55 16 8 C 0.13 0.25 6.69 -39.22 -0.26 -0.01 16 9 O -0.32 -0.46 10.14 -19.44 -0.20 -0.65 16 10 C 0.07 -0.02 4.03 37.16 0.15 0.13 16 11 C -0.14 0.38 6.07 -27.88 -0.17 0.21 16 12 C 0.52 -0.46 7.83 -10.99 -0.09 -0.55 16 13 O -0.53 -1.71 15.58 5.55 0.09 -1.62 16 14 N -0.71 2.38 5.26 -52.92 -0.28 2.10 16 15 C 0.12 -0.34 4.33 -67.02 -0.29 -0.63 16 16 H 0.11 -0.11 7.46 -51.93 -0.39 -0.50 16 17 C -0.14 0.46 7.27 -25.83 -0.19 0.27 16 18 C -0.08 0.31 3.85 -90.96 -0.35 -0.04 16 19 H 0.11 -0.55 8.09 -51.92 -0.42 -0.97 16 20 C -0.01 0.03 5.29 -104.65 -0.55 -0.52 16 21 C -0.16 0.23 9.69 -39.51 -0.38 -0.15 16 22 C 0.14 0.03 7.30 -39.43 -0.29 -0.26 16 23 F -0.13 -0.19 17.27 2.25 0.04 -0.15 16 24 C -0.20 -0.03 10.01 -39.45 -0.39 -0.42 16 25 C 0.14 0.03 7.30 -39.43 -0.29 -0.26 16 26 F -0.13 -0.19 17.27 2.25 0.04 -0.15 16 27 C -0.16 0.23 8.51 -39.50 -0.34 -0.10 16 28 C -0.14 0.56 7.29 -25.92 -0.19 0.38 16 29 C -0.13 -0.22 9.55 -39.43 -0.38 -0.60 16 30 H 0.38 -0.48 8.70 45.56 0.40 -0.09 16 31 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 32 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 33 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 34 H 0.13 -0.23 4.87 -52.49 -0.26 -0.48 16 35 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 36 H 0.13 0.00 6.30 -52.49 -0.33 -0.33 16 37 H 0.07 0.00 7.61 -51.93 -0.40 -0.40 16 38 H 0.07 0.01 7.63 -51.93 -0.40 -0.39 16 39 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 40 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 41 H 0.40 -2.41 8.70 -40.82 -0.36 -2.76 16 42 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 43 H 0.10 -0.32 6.39 -51.93 -0.33 -0.65 16 44 H 0.14 -0.44 8.05 -52.49 -0.42 -0.87 16 45 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 46 H 0.14 -0.42 6.72 -52.49 -0.35 -0.77 16 47 H 0.10 -0.42 7.64 -51.93 -0.40 -0.82 16 48 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 49 H 0.13 0.23 8.06 -52.49 -0.42 -0.20 16 LS Contribution 416.11 15.07 6.27 6.27 Total: 0.00 -8.36 416.11 -11.34 -19.70 By element: Atomic # 1 Polarization: -7.98 SS G_CDS: -6.22 Total: -14.20 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -5.56 Total: -4.41 kcal Atomic # 7 Polarization: 2.38 SS G_CDS: -0.28 Total: 2.10 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -0.56 Total: -3.51 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.08 Total: -0.31 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.06 Total: -5.64 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -8.36 -11.34 -19.70 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.420 kcal (2) G-P(sol) polarization free energy of solvation -8.360 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.780 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.116 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds