Wall clock time and date at job start Mon Mar 8 2021 02:27:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47406 * 2 1 4 4 C 1.50699 * 109.46801 * 239.99751 * 2 1 3 5 5 C 1.38245 * 119.97114 * 120.02636 * 4 2 1 6 6 C 1.38291 * 120.11438 * 179.97438 * 5 4 2 7 7 C 1.38123 * 120.05400 * 359.77072 * 6 5 4 8 8 C 1.38757 * 119.94134 * 0.50428 * 7 6 5 9 9 O 1.35904 * 120.05232 * 179.75012 * 8 7 6 10 10 C 1.42900 * 117.00116 * 359.72210 * 9 8 7 11 11 C 1.52995 * 109.47172 * 180.02562 * 10 9 8 12 12 C 1.50701 * 109.47243 * 180.02562 * 11 10 9 13 13 O 1.21283 * 119.99974 * 359.97438 * 12 11 10 14 14 N 1.34776 * 119.99867 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99524 * 179.97438 * 14 12 11 16 16 H 1.08998 * 112.85555 * 336.19819 * 15 14 12 17 17 C 1.53958 * 113.61000 * 107.47467 * 15 14 12 18 18 C 1.53776 * 87.02290 * 89.19920 * 17 15 14 19 19 H 1.09010 * 113.61054 * 270.77082 * 18 17 15 20 20 C 1.50696 * 113.62046 * 139.95113 * 18 17 15 21 21 C 1.38203 * 119.97590 * 140.86015 * 20 18 17 22 22 C 1.38476 * 120.02404 * 180.02562 * 21 20 18 23 23 F 1.35096 * 120.01244 * 179.97438 * 22 21 20 24 24 C 1.38423 * 119.97577 * 359.97279 * 22 21 20 25 25 C 1.38420 * 119.94664 * 0.26233 * 24 22 21 26 26 F 1.35104 * 120.01022 * 179.72453 * 25 24 22 27 27 C 1.38207 * 119.97109 * 320.84315 * 20 18 17 28 28 C 1.53781 * 87.17426 * 25.35920 * 18 17 15 29 29 C 1.38167 * 119.97733 * 300.00098 * 4 2 1 30 30 H 0.96698 * 113.99779 * 59.99955 * 1 2 3 31 31 H 1.08997 * 109.46995 * 120.00235 * 2 1 3 32 32 H 1.48501 * 110.00130 * 298.68247 * 3 2 1 33 33 H 1.48503 * 110.00066 * 60.00104 * 3 2 1 34 34 H 1.08001 * 119.94188 * 359.97438 * 5 4 2 35 35 H 1.08003 * 119.97131 * 180.02562 * 6 5 4 36 36 H 1.07998 * 120.02794 * 180.27808 * 7 6 5 37 37 H 1.09004 * 109.46910 * 60.00256 * 10 9 8 38 38 H 1.09000 * 109.47065 * 300.00652 * 10 9 8 39 39 H 1.08996 * 109.47408 * 59.99786 * 11 10 9 40 40 H 1.09000 * 109.47249 * 300.00039 * 11 10 9 41 41 H 0.96993 * 120.00253 * 0.02562 * 14 12 11 42 42 H 1.08998 * 113.66680 * 334.66688 * 17 15 14 43 43 H 1.09004 * 113.61023 * 203.72028 * 17 15 14 44 44 H 1.07996 * 119.99270 * 359.97438 * 21 20 18 45 45 H 1.08002 * 120.02325 * 179.97438 * 24 22 21 46 46 H 1.08002 * 119.99155 * 0.02562 * 27 20 18 47 47 H 1.09003 * 113.61252 * 89.16128 * 28 18 17 48 48 H 1.09006 * 113.61677 * 219.98171 * 28 18 17 49 49 H 1.07999 * 120.02245 * 0.02562 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7265 -0.0383 -2.1398 6 6 3.1894 -0.6875 -3.2697 7 6 2.8621 -2.0112 -3.4899 8 6 2.0594 -2.6865 -2.5815 9 8 1.7318 -3.9874 -2.7985 10 6 2.2436 -4.5961 -3.9858 11 6 1.7722 -6.0498 -4.0576 12 6 2.3126 -6.6918 -5.3094 13 8 3.0061 -6.0497 -6.0695 14 7 2.0252 -7.9796 -5.5842 15 6 2.5500 -8.6035 -6.8013 16 1 2.7871 -7.8788 -7.5802 17 6 3.6775 -9.6181 -6.5373 18 6 2.5775 -10.6843 -6.4029 19 1 2.1945 -10.7909 -5.3879 20 6 2.9359 -12.0046 -7.0348 21 6 2.5816 -13.1867 -6.4127 22 6 2.9109 -14.4005 -6.9922 23 9 2.5649 -15.5559 -6.3836 24 6 3.5947 -14.4295 -8.1954 25 6 3.9533 -13.2449 -8.8151 26 9 4.6257 -13.2717 -9.9867 27 6 3.6184 -12.0323 -8.2363 28 6 1.7060 -9.7888 -7.2992 29 6 1.5971 -2.0333 -1.4486 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5139 0.8899 32 1 1.5880 2.4585 -1.2242 33 1 1.5616 2.4678 1.2085 34 1 2.9866 0.9957 -1.9676 35 1 3.8108 -0.1603 -3.9784 36 1 3.2276 -2.5191 -4.3701 37 1 3.3332 -4.5675 -3.9679 38 1 1.8802 -4.0530 -4.8582 39 1 0.6828 -6.0780 -4.0756 40 1 2.1354 -6.5931 -3.1852 41 1 1.4703 -8.4930 -4.9765 42 1 4.2232 -9.4347 -5.6117 43 1 4.3341 -9.7737 -7.3933 44 1 2.0484 -13.1639 -5.4738 45 1 3.8523 -15.3757 -8.6479 46 1 3.8949 -11.1079 -8.7216 47 1 1.8226 -9.9911 -8.3639 48 1 0.6621 -9.7440 -6.9887 49 1 0.9759 -2.5579 -0.7378 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:27:44 Heat of formation + Delta-G solvation = -112.124629 kcal Electronic energy + Delta-G solvation = -33476.421045 eV Core-core repulsion = 28393.334202 eV Total energy + Delta-G solvation = -5083.086844 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.148 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -50.09210 -50.06951 -41.68422 -41.27140 -40.36327 -39.19782 -38.61642 -37.37986 -34.64790 -33.27385 -32.47848 -31.90983 -31.35332 -30.75536 -27.17841 -26.70882 -26.66159 -25.26146 -23.95522 -23.67395 -23.00047 -22.18560 -21.48765 -20.37791 -19.41502 -18.97008 -18.20223 -18.13250 -17.74121 -17.48737 -17.44034 -17.12224 -17.06245 -17.03513 -16.85044 -16.69129 -16.38886 -16.27824 -16.03416 -15.66510 -15.58692 -15.36855 -15.17481 -14.89134 -14.56614 -14.36011 -14.24263 -14.12500 -13.88087 -13.71130 -13.48351 -13.24119 -13.07362 -12.97835 -12.91661 -12.85137 -12.75292 -12.39689 -12.08948 -11.99225 -11.80768 -11.69971 -11.57621 -11.31628 -11.06935 -10.67672 -10.12589 -9.93520 -9.91176 -9.82591 -9.27230 -4.89778 -0.11711 -0.09941 0.19798 0.39408 1.30253 1.50950 1.62823 1.69761 1.97212 2.24074 2.47819 2.66151 2.76484 3.25487 3.37667 3.41084 3.55782 3.56791 3.63669 3.66340 3.76062 3.84823 3.88605 3.90152 3.92741 3.98637 4.06163 4.10113 4.12218 4.23802 4.28910 4.40625 4.56121 4.59449 4.63919 4.68613 4.72070 4.74749 4.76705 4.77209 4.78730 4.88110 4.96097 4.97023 4.98459 5.03899 5.13742 5.26162 5.32586 5.38153 5.44059 5.59535 5.70399 5.70410 6.33173 6.46889 6.47382 7.16728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.086 4.086 3 Si 0.774 3.226 4 C -0.082 4.082 5 C -0.157 4.157 6 C -0.076 4.076 7 C -0.211 4.211 8 C 0.117 3.883 9 O -0.324 6.324 10 C 0.073 3.927 11 C -0.133 4.133 12 C 0.523 3.477 13 O -0.582 6.582 14 N -0.697 5.697 15 C 0.114 3.886 16 H 0.087 0.913 17 C -0.143 4.143 18 C -0.067 4.067 19 H 0.127 0.873 20 C -0.009 4.009 21 C -0.155 4.155 22 C 0.117 3.883 23 F -0.140 7.140 24 C -0.206 4.206 25 C 0.117 3.883 26 F -0.141 7.141 27 C -0.159 4.159 28 C -0.126 4.126 29 C -0.141 4.141 30 H 0.386 0.614 31 H 0.126 0.874 32 H -0.282 1.282 33 H -0.302 1.302 34 H 0.148 0.852 35 H 0.152 0.848 36 H 0.137 0.863 37 H 0.066 0.934 38 H 0.064 0.936 39 H 0.126 0.874 40 H 0.128 0.872 41 H 0.420 0.580 42 H 0.074 0.926 43 H 0.097 0.903 44 H 0.163 0.837 45 H 0.150 0.850 46 H 0.157 0.843 47 H 0.101 0.899 48 H 0.094 0.906 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.120 -0.188 1.062 1.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.194 4.194 3 Si 0.679 3.321 4 C -0.082 4.082 5 C -0.175 4.175 6 C -0.094 4.094 7 C -0.229 4.229 8 C 0.072 3.928 9 O -0.238 6.238 10 C -0.002 4.002 11 C -0.173 4.173 12 C 0.311 3.689 13 O -0.462 6.462 14 N -0.349 5.349 15 C 0.009 3.991 16 H 0.105 0.895 17 C -0.182 4.182 18 C -0.085 4.085 19 H 0.144 0.856 20 C -0.010 4.010 21 C -0.173 4.173 22 C 0.098 3.902 23 F -0.119 7.119 24 C -0.225 4.225 25 C 0.098 3.902 26 F -0.119 7.119 27 C -0.178 4.178 28 C -0.163 4.163 29 C -0.160 4.160 30 H 0.235 0.765 31 H 0.144 0.856 32 H -0.208 1.208 33 H -0.231 1.231 34 H 0.165 0.835 35 H 0.170 0.830 36 H 0.155 0.845 37 H 0.084 0.916 38 H 0.082 0.918 39 H 0.144 0.856 40 H 0.146 0.854 41 H 0.258 0.742 42 H 0.093 0.907 43 H 0.115 0.885 44 H 0.181 0.819 45 H 0.168 0.832 46 H 0.175 0.825 47 H 0.120 0.880 48 H 0.113 0.887 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 0.136 0.573 1.153 1.294 hybrid contribution -1.012 -1.052 -0.809 1.669 sum -0.876 -0.479 0.344 1.056 Atomic orbital electron populations 1.86570 1.18453 1.80456 1.50140 1.25334 0.83513 1.12184 0.98403 0.93915 0.90330 0.71435 0.76396 1.20165 0.97669 0.93519 0.96883 1.21172 1.00287 1.00869 0.95126 1.21247 0.97661 0.93413 0.97041 1.21555 1.03046 0.97066 1.01265 1.19136 0.95223 0.83551 0.94907 1.85953 1.71394 1.22769 1.43715 1.22452 0.99000 0.93304 0.85474 1.21439 1.04933 0.93898 0.96987 1.20597 0.79339 0.82048 0.86927 1.90746 1.40085 1.63856 1.51493 1.45512 1.53084 1.11445 1.24904 1.21875 0.95494 0.94245 0.87536 0.89467 1.23610 0.96574 0.94438 1.03551 1.21735 0.97773 0.88361 1.00630 0.85551 1.19481 0.93955 0.94988 0.92545 1.21376 1.03354 0.89781 1.02825 1.17473 0.98525 0.82228 0.91994 1.91531 1.90114 1.47782 1.82441 1.21187 1.04524 0.99708 0.97118 1.17440 0.95509 0.94253 0.82992 1.91533 1.77782 1.97390 1.45230 1.21272 1.01906 0.97251 0.97377 1.23405 0.99708 0.92367 1.00856 1.20315 1.03795 0.94639 0.97224 0.76457 0.85635 1.20821 1.23064 0.83514 0.82999 0.84542 0.91588 0.91801 0.85558 0.85432 0.74221 0.90699 0.88512 0.81921 0.83202 0.82546 0.88030 0.88742 0.85420 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.83 12.77 -148.98 -1.90 -3.73 16 2 C -0.09 -0.01 2.82 71.24 0.20 0.19 16 3 Si 0.77 -1.57 29.79 68.60 2.04 0.47 16 4 C -0.08 -0.12 5.39 -19.88 -0.11 -0.23 16 5 C -0.16 0.10 8.67 22.28 0.19 0.29 16 6 C -0.08 0.02 10.04 22.25 0.22 0.24 16 7 C -0.21 -0.50 9.04 22.37 0.20 -0.30 16 8 C 0.12 0.53 6.69 22.51 0.15 0.68 16 9 O -0.32 -1.14 10.14 -92.47 -0.94 -2.08 16 10 C 0.07 0.00 4.03 71.98 0.29 0.29 16 11 C -0.13 0.79 6.07 29.85 0.18 0.97 16 12 C 0.52 -0.98 7.83 87.66 0.69 -0.29 16 13 O -0.58 -4.38 15.58 -3.04 -0.05 -4.43 16 14 N -0.70 5.36 5.26 -439.74 -2.32 3.05 16 15 C 0.11 -0.71 4.33 45.58 0.20 -0.51 16 16 H 0.09 -0.10 7.46 -2.39 -0.02 -0.12 16 17 C -0.14 1.02 7.27 31.18 0.23 1.24 16 18 C -0.07 0.65 3.85 -11.02 -0.04 0.61 16 19 H 0.13 -1.70 8.09 -2.38 -0.02 -1.72 16 20 C -0.01 0.05 5.29 -19.88 -0.11 -0.05 16 21 C -0.15 0.61 9.69 22.32 0.22 0.82 16 22 C 0.12 0.07 7.30 22.37 0.16 0.24 16 23 F -0.14 -0.49 17.27 44.97 0.78 0.29 16 24 C -0.21 -0.25 10.01 22.36 0.22 -0.02 16 25 C 0.12 0.13 7.30 22.37 0.16 0.29 16 26 F -0.14 -0.58 17.27 44.97 0.78 0.19 16 27 C -0.16 0.49 8.51 22.32 0.19 0.68 16 28 C -0.13 1.23 7.29 31.12 0.23 1.46 16 29 C -0.14 -0.60 9.55 22.36 0.21 -0.39 16 30 H 0.39 -0.86 8.70 -74.06 -0.64 -1.50 16 31 H 0.13 -0.18 7.96 -2.39 -0.02 -0.20 16 32 H -0.28 -0.45 7.11 99.48 0.71 0.26 16 33 H -0.30 -1.69 7.11 99.48 0.71 -0.99 16 34 H 0.15 -0.74 4.87 -2.91 -0.01 -0.75 16 35 H 0.15 -0.78 8.06 -2.91 -0.02 -0.80 16 36 H 0.14 0.11 6.30 -2.91 -0.02 0.10 16 37 H 0.07 0.08 7.61 -2.38 -0.02 0.06 16 38 H 0.06 0.09 7.63 -2.39 -0.02 0.08 16 39 H 0.13 -1.18 8.14 -2.39 -0.02 -1.20 16 40 H 0.13 -1.22 8.14 -2.39 -0.02 -1.24 16 41 H 0.42 -5.90 8.70 -92.71 -0.81 -6.71 16 42 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 43 H 0.10 -0.65 6.39 -2.38 -0.02 -0.67 16 44 H 0.16 -1.35 8.05 -2.91 -0.02 -1.38 16 45 H 0.15 -0.02 8.06 -2.91 -0.02 -0.04 16 46 H 0.16 -0.96 6.72 -2.91 -0.02 -0.98 16 47 H 0.10 -0.95 7.64 -2.39 -0.02 -0.96 16 48 H 0.09 -1.11 8.14 -2.38 -0.02 -1.12 16 49 H 0.13 0.60 8.06 -2.91 -0.02 0.57 16 Total: 0.00 -21.48 416.11 1.70 -19.77 By element: Atomic # 1 Polarization: -19.38 SS G_CDS: -0.39 Total: -19.77 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: 3.69 Total: 6.23 kcal Atomic # 7 Polarization: 5.36 SS G_CDS: -2.32 Total: 3.05 kcal Atomic # 8 Polarization: -7.35 SS G_CDS: -2.89 Total: -10.23 kcal Atomic # 9 Polarization: -1.07 SS G_CDS: 1.55 Total: 0.48 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: 2.04 Total: 0.47 kcal Total: -21.48 1.70 -19.77 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.351 kcal (2) G-P(sol) polarization free energy of solvation -21.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.826 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.702 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.774 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.125 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds