Wall clock time and date at job start Mon Mar 8 2021 02:28:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37643 * 125.67994 * 2 1 4 4 C 1.46681 * 126.21884 * 0.02562 * 3 2 1 5 5 O 1.21691 * 120.00283 * 354.99260 * 4 3 2 6 6 N 1.34773 * 119.99322 * 174.99051 * 4 3 2 7 7 C 1.46500 * 119.99767 * 185.18168 * 6 4 3 8 8 H 1.09006 * 112.84605 * 23.81181 * 7 6 4 9 9 C 1.53784 * 113.61528 * 155.00336 * 7 6 4 10 10 C 1.53779 * 87.08124 * 89.11954 * 9 7 6 11 11 H 1.08997 * 113.61694 * 270.88456 * 10 9 7 12 12 C 1.50702 * 113.61392 * 140.06266 * 10 9 7 13 13 C 1.38198 * 119.97779 * 299.73257 * 12 10 9 14 14 C 1.38473 * 120.02504 * 179.72810 * 13 12 10 15 15 F 1.35107 * 120.01206 * 180.24973 * 14 13 12 16 16 C 1.38415 * 119.97487 * 0.53865 * 14 13 12 17 17 C 1.38425 * 119.94922 * 359.73060 * 16 14 13 18 18 F 1.35099 * 120.01121 * 180.02562 * 17 16 14 19 19 C 1.38211 * 119.96905 * 120.00189 * 12 10 9 20 20 C 1.53773 * 113.61896 * 252.50282 * 7 6 4 21 21 C 1.37884 * 107.55181 * 179.97438 * 3 2 1 22 22 C 1.39869 * 107.09246 * 359.78503 * 21 3 2 23 23 Br 1.89104 * 126.07371 * 180.22368 * 22 21 3 24 24 C 1.35509 * 107.85516 * 0.35356 * 22 21 3 25 25 C 1.50695 * 125.57314 * 179.90176 * 24 22 21 26 26 O 1.42898 * 109.47180 * 65.27849 * 25 24 22 27 27 Si 1.86304 * 109.47454 * 305.27970 * 25 24 22 28 28 H 1.08999 * 109.47156 * 275.49619 * 1 2 3 29 29 H 1.09006 * 109.47178 * 35.49590 * 1 2 3 30 30 H 1.08997 * 109.47253 * 155.49281 * 1 2 3 31 31 H 0.97003 * 120.00885 * 5.18949 * 6 4 3 32 32 H 1.09004 * 113.61292 * 203.66881 * 9 7 6 33 33 H 1.08998 * 113.61441 * 334.57239 * 9 7 6 34 34 H 1.08003 * 119.99054 * 359.97148 * 13 12 10 35 35 H 1.07998 * 120.02680 * 179.75158 * 16 14 13 36 36 H 1.07997 * 119.98919 * 359.97438 * 19 12 10 37 37 H 1.08997 * 113.61629 * 25.42902 * 20 7 6 38 38 H 1.09002 * 113.61790 * 156.33640 * 20 7 6 39 39 H 1.08004 * 126.44996 * 179.97438 * 21 3 2 40 40 H 1.08995 * 109.47491 * 185.27690 * 25 24 22 41 41 H 0.96699 * 113.99918 * 300.00289 * 26 25 24 42 42 H 1.48496 * 110.00329 * 174.99168 * 27 25 24 43 43 H 1.48502 * 109.99642 * 296.31673 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8120 2.5123 0.0005 5 8 0.6251 2.7645 -0.0910 6 7 2.7080 3.5139 0.1024 7 6 2.2473 4.8998 0.2173 8 1 1.2357 4.9779 0.6159 9 6 3.2566 5.8289 0.9123 10 6 3.8572 6.0879 -0.4795 11 1 4.6401 5.3816 -0.7555 12 6 4.2570 7.5230 -0.7069 13 6 3.3070 8.5242 -0.6350 14 6 3.6743 9.8438 -0.8383 15 9 2.7463 10.8228 -0.7630 16 6 4.9914 10.1588 -1.1244 17 6 5.9411 9.1546 -1.2016 18 9 7.2271 9.4607 -1.4803 19 6 5.5725 7.8363 -0.9926 20 6 2.4761 5.7326 -1.0550 21 6 3.5782 0.6890 0.0006 22 6 3.5529 -0.7094 0.0060 23 35 5.0610 -1.8503 0.0151 24 6 2.2558 -1.1015 0.0005 25 6 1.7713 -2.5285 0.0015 26 8 2.1457 -3.1579 1.2285 27 14 2.5392 -3.4461 -1.4266 28 1 -0.3633 0.0984 1.0229 29 1 -0.3634 0.8367 -0.5967 30 1 -0.3633 -0.9351 -0.4263 31 1 3.6579 3.3173 0.0995 32 1 2.8004 6.7108 1.3620 33 1 3.9337 5.3091 1.5901 34 1 2.2785 8.2777 -0.4165 35 1 5.2780 11.1873 -1.2870 36 1 6.3133 7.0527 -1.0523 37 1 2.5231 5.1351 -1.9654 38 1 1.8066 6.5883 -1.1431 39 1 4.4583 1.3150 0.0004 40 1 0.6861 -2.5439 -0.0983 41 1 3.0999 -3.1804 1.3839 42 1 2.1658 -4.8821 -1.3674 43 1 2.0863 -2.8559 -2.7118 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705374_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:28:48 Heat of formation + Delta-G solvation = -43.230462 kcal Electronic energy + Delta-G solvation = -31604.623200 eV Core-core repulsion = 26721.725870 eV Total energy + Delta-G solvation = -4882.897331 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.038 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -50.07070 -50.04499 -42.88920 -41.48448 -40.08507 -38.60191 -37.90179 -35.10329 -34.22903 -32.46696 -31.76484 -31.33181 -30.93280 -27.51823 -27.40557 -26.69078 -26.12026 -24.01510 -23.60468 -22.88860 -21.62752 -20.71628 -20.24162 -19.12985 -18.88624 -18.21184 -18.09849 -17.43677 -17.40940 -17.05876 -17.03491 -16.74403 -16.58827 -16.36657 -16.08343 -15.79940 -15.72299 -15.43214 -15.29660 -14.96145 -14.75911 -14.59006 -14.36481 -14.12287 -14.04194 -13.82810 -13.69718 -13.47128 -13.23712 -13.07174 -12.92213 -12.77395 -12.61361 -12.38411 -12.07556 -11.99094 -11.69259 -11.55824 -11.30500 -11.16864 -10.87716 -10.21599 -9.89515 -9.83229 -9.80180 -9.33356 -5.00286 -0.09261 -0.07362 0.13436 0.49528 0.91166 1.15886 1.46701 1.56185 1.84869 2.13458 2.23512 2.26863 2.78793 3.16524 3.27451 3.39392 3.39941 3.53778 3.57477 3.64835 3.68285 3.78660 3.85012 3.92013 3.93562 4.08452 4.11860 4.14513 4.25022 4.38763 4.54651 4.59373 4.67544 4.73900 4.75972 4.79437 4.79624 4.87859 4.98703 4.99220 5.06516 5.14113 5.27284 5.34857 5.55997 5.60266 5.72909 5.76199 6.37303 6.40543 7.05266 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.398 5.398 3 C -0.056 4.056 4 C 0.593 3.407 5 O -0.576 6.576 6 N -0.684 5.684 7 C 0.119 3.881 8 H 0.090 0.910 9 C -0.124 4.124 10 C -0.067 4.067 11 H 0.128 0.872 12 C -0.009 4.009 13 C -0.159 4.159 14 C 0.117 3.883 15 F -0.142 7.142 16 C -0.206 4.206 17 C 0.117 3.883 18 F -0.140 7.140 19 C -0.153 4.153 20 C -0.143 4.143 21 C -0.091 4.091 22 C -0.184 4.184 23 Br 0.034 6.966 24 C 0.049 3.951 25 C -0.052 4.052 26 O -0.540 6.540 27 Si 0.715 3.285 28 H 0.086 0.914 29 H 0.098 0.902 30 H 0.101 0.899 31 H 0.419 0.581 32 H 0.104 0.896 33 H 0.096 0.904 34 H 0.157 0.843 35 H 0.149 0.851 36 H 0.165 0.835 37 H 0.073 0.927 38 H 0.099 0.901 39 H 0.190 0.810 40 H 0.121 0.879 41 H 0.388 0.612 42 H -0.265 1.265 43 H -0.278 1.278 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.195 -1.374 0.963 4.518 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.071 5.071 3 C -0.169 4.169 4 C 0.381 3.619 5 O -0.457 6.457 6 N -0.335 5.335 7 C 0.013 3.987 8 H 0.108 0.892 9 C -0.162 4.162 10 C -0.085 4.085 11 H 0.146 0.854 12 C -0.009 4.009 13 C -0.178 4.178 14 C 0.097 3.903 15 F -0.120 7.120 16 C -0.226 4.226 17 C 0.098 3.902 18 F -0.119 7.119 19 C -0.172 4.172 20 C -0.182 4.182 21 C -0.118 4.118 22 C -0.270 4.270 23 Br 0.118 6.882 24 C -0.073 4.073 25 C -0.163 4.163 26 O -0.347 6.347 27 Si 0.616 3.384 28 H 0.104 0.896 29 H 0.116 0.884 30 H 0.120 0.880 31 H 0.258 0.742 32 H 0.123 0.877 33 H 0.115 0.885 34 H 0.175 0.825 35 H 0.167 0.833 36 H 0.182 0.818 37 H 0.092 0.908 38 H 0.117 0.883 39 H 0.207 0.793 40 H 0.139 0.861 41 H 0.239 0.761 42 H -0.190 1.190 43 H -0.203 1.203 Dipole moment (debyes) X Y Z Total from point charges 2.738 -2.062 0.272 3.438 hybrid contribution -0.627 1.089 0.081 1.260 sum 2.111 -0.972 0.353 2.350 Atomic orbital electron populations 1.22448 0.74795 1.05720 1.05107 1.43966 1.07623 1.04304 1.51208 1.20171 0.90449 0.87611 1.18717 1.16957 0.85432 0.83745 0.75727 1.90816 1.17806 1.85117 1.51979 1.45158 1.10109 1.04925 1.73336 1.21877 0.99509 0.79546 0.97739 0.89150 1.23419 0.97500 0.99500 0.95734 1.21746 0.98015 0.91186 0.97569 0.85431 1.19464 0.91177 0.95728 0.94516 1.21278 1.02536 0.89994 1.03995 1.17443 0.85602 0.85859 1.01361 1.91532 1.64851 1.61881 1.93743 1.21183 0.92203 1.01601 1.07610 1.17474 0.78375 0.93825 1.00557 1.91532 1.35291 1.94009 1.91041 1.21384 0.98058 0.94832 1.02937 1.23592 0.96343 1.00274 0.97982 1.21552 0.95461 0.92781 1.01994 1.20856 0.90970 0.95325 1.19826 1.96621 1.34045 1.60496 1.97020 1.21065 0.90071 0.89919 1.06290 1.24811 1.04698 0.88793 0.97953 1.86515 1.30518 1.79155 1.38556 0.93167 0.94039 0.77591 0.73633 0.89555 0.88354 0.88016 0.74249 0.87723 0.88516 0.82505 0.83295 0.81786 0.90848 0.88272 0.79333 0.86131 0.76115 1.19042 1.20328 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.01 10.27 127.77 1.31 1.32 16 2 N -0.40 -0.87 3.16 -519.60 -1.64 -2.51 16 3 C -0.06 -0.04 6.89 40.35 0.28 0.24 16 4 C 0.59 0.89 7.77 86.45 0.67 1.56 16 5 O -0.58 -5.00 14.41 -4.32 -0.06 -5.07 16 6 N -0.68 4.08 5.25 -444.00 -2.33 1.75 16 7 C 0.12 -0.73 4.29 45.52 0.20 -0.53 16 8 H 0.09 -0.15 7.53 -2.38 -0.02 -0.17 16 9 C -0.12 1.27 7.29 31.12 0.23 1.50 16 10 C -0.07 0.68 3.85 -11.01 -0.04 0.64 16 11 H 0.13 -1.76 8.09 -2.39 -0.02 -1.78 16 12 C -0.01 0.05 5.29 -19.88 -0.11 -0.05 16 13 C -0.16 0.54 8.60 22.32 0.19 0.74 16 14 C 0.12 0.11 7.30 22.37 0.16 0.27 16 15 F -0.14 -0.58 17.27 44.97 0.78 0.20 16 16 C -0.21 -0.22 10.01 22.36 0.22 0.01 16 17 C 0.12 0.04 7.30 22.37 0.16 0.21 16 18 F -0.14 -0.45 17.27 44.97 0.78 0.32 16 19 C -0.15 0.66 9.69 22.32 0.22 0.88 16 20 C -0.14 1.02 7.25 31.12 0.23 1.25 16 21 C -0.09 0.33 10.34 22.58 0.23 0.57 16 22 C -0.18 0.29 6.04 22.03 0.13 0.42 16 23 Br 0.03 -0.17 29.40 -20.37 -0.60 -0.77 16 24 C 0.05 0.05 5.48 41.34 0.23 0.28 16 25 C -0.05 -0.03 2.82 71.23 0.20 0.17 16 26 O -0.54 -0.99 12.88 -148.98 -1.92 -2.91 16 27 Si 0.71 0.38 29.65 68.60 2.03 2.42 16 28 H 0.09 -0.03 8.14 -2.39 -0.02 -0.04 16 29 H 0.10 0.24 6.54 -2.38 -0.02 0.23 16 30 H 0.10 -0.39 6.68 -2.39 -0.02 -0.40 16 31 H 0.42 -5.07 7.60 -92.71 -0.70 -5.77 16 32 H 0.10 -1.05 7.73 -2.39 -0.02 -1.07 16 33 H 0.10 -1.18 8.14 -2.39 -0.02 -1.20 16 34 H 0.16 -1.02 6.64 -2.91 -0.02 -1.04 16 35 H 0.15 -0.02 8.06 -2.91 -0.02 -0.05 16 36 H 0.16 -1.45 8.05 -2.91 -0.02 -1.48 16 37 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 38 H 0.10 -0.70 6.30 -2.39 -0.02 -0.72 16 39 H 0.19 -2.09 7.45 -2.91 -0.02 -2.12 16 40 H 0.12 -0.09 6.33 -2.39 -0.02 -0.10 16 41 H 0.39 -1.25 7.20 -74.06 -0.53 -1.78 16 42 H -0.27 -1.41 7.11 99.48 0.71 -0.70 16 43 H -0.28 -1.56 7.11 99.48 0.71 -0.86 16 Total: 0.00 -18.02 382.61 1.46 -16.56 By element: Atomic # 1 Polarization: -19.36 SS G_CDS: -0.09 Total: -19.45 kcal Atomic # 6 Polarization: 4.94 SS G_CDS: 4.52 Total: 9.45 kcal Atomic # 7 Polarization: 3.22 SS G_CDS: -3.97 Total: -0.76 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -1.98 Total: -7.97 kcal Atomic # 9 Polarization: -1.03 SS G_CDS: 1.55 Total: 0.52 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: 2.03 Total: 2.42 kcal Atomic # 35 Polarization: -0.17 SS G_CDS: -0.60 Total: -0.77 kcal Total: -18.02 1.46 -16.56 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.669 kcal (2) G-P(sol) polarization free energy of solvation -18.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.462 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds