Wall clock time and date at job start Mon Mar 8 2021 02:29:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46927 * 2 1 4 4 C 1.50703 * 109.47171 * 119.99815 * 2 1 3 5 5 C 1.35455 * 125.56044 * 245.02790 * 4 2 1 6 6 C 1.39842 * 107.86027 * 179.97438 * 5 4 2 7 7 C 1.37872 * 107.08616 * 0.02562 * 6 5 4 8 8 C 1.46676 * 126.23297 * 180.02562 * 7 6 5 9 9 O 1.21693 * 119.99740 * 359.97107 * 8 7 6 10 10 N 1.34773 * 120.00325 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00379 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.84495 * 23.80505 * 11 10 8 13 13 C 1.53780 * 113.61306 * 154.99910 * 11 10 8 14 14 C 1.53775 * 87.08178 * 89.11925 * 13 11 10 15 15 H 1.09004 * 113.61676 * 270.88473 * 14 13 11 16 16 C 1.50698 * 113.61739 * 140.06339 * 14 13 11 17 17 C 1.38211 * 119.97311 * 299.72218 * 16 14 13 18 18 C 1.38479 * 120.02236 * 179.76506 * 17 16 14 19 19 F 1.35096 * 120.01185 * 180.24805 * 18 17 16 20 20 C 1.38422 * 119.97254 * 0.53288 * 18 17 16 21 21 C 1.38416 * 119.95224 * 359.72289 * 20 18 17 22 22 F 1.35103 * 120.01315 * 180.02562 * 21 20 18 23 23 C 1.38212 * 119.97259 * 119.99772 * 16 14 13 24 24 C 1.53776 * 87.08378 * 25.42931 * 14 13 11 25 25 N 1.35536 * 125.56446 * 64.72018 * 4 2 1 26 26 H 0.96701 * 113.99881 * 60.00555 * 1 2 3 27 27 H 1.09002 * 109.47259 * 239.99966 * 2 1 3 28 28 H 1.48493 * 110.00286 * 59.99740 * 3 2 1 29 29 H 1.48505 * 109.99793 * 181.32137 * 3 2 1 30 30 H 1.08000 * 126.07062 * 0.03280 * 5 4 2 31 31 H 1.07999 * 126.45723 * 179.97438 * 6 5 4 32 32 H 0.97001 * 119.99813 * 359.97438 * 10 8 7 33 33 H 1.09010 * 113.61033 * 203.66623 * 13 11 10 34 34 H 1.08992 * 113.61585 * 334.56942 * 13 11 10 35 35 H 1.07990 * 119.98931 * 0.02562 * 17 16 14 36 36 H 1.07998 * 120.02062 * 179.74120 * 20 18 17 37 37 H 1.07993 * 119.99366 * 359.97438 * 23 16 14 38 38 H 1.09000 * 113.61713 * 220.01848 * 24 14 13 39 39 H 1.09000 * 113.61402 * 89.11937 * 24 14 13 40 40 H 0.97000 * 125.67210 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6325 -0.1391 2.2388 6 6 2.9069 -1.1306 3.1860 7 6 2.3534 -2.3031 2.7170 8 6 2.3937 -3.6086 3.3844 9 8 2.9567 -3.7265 4.4568 10 7 1.8075 -4.6775 2.8100 11 6 1.8482 -5.9816 3.4763 12 1 1.9899 -5.9019 4.5541 13 6 0.6944 -6.9152 3.0740 14 6 1.5977 -7.4107 1.9324 15 1 1.4990 -6.8312 1.0145 16 6 1.5138 -8.8970 1.6979 17 6 1.8544 -9.7758 2.7088 18 6 1.7730 -11.1417 2.4961 19 9 2.1011 -12.0005 3.4860 20 6 1.3611 -11.6268 1.2668 21 6 1.0254 -10.7457 0.2534 22 9 0.6226 -11.2178 -0.9467 23 6 1.1019 -9.3802 0.4703 24 6 2.7942 -6.9888 2.8014 25 7 1.7502 -2.0238 1.5116 26 1 -0.3933 0.4416 -0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4680 1.2084 29 1 3.5346 1.7703 -0.0322 30 1 2.9266 0.8983 2.3008 31 1 3.4506 -1.0024 4.1103 32 1 1.3585 -4.5834 1.9553 33 1 0.4719 -7.6801 3.8181 34 1 -0.1946 -6.3872 2.7294 35 1 2.1799 -9.3971 3.6663 36 1 1.3014 -12.6919 1.0987 37 1 0.8400 -8.6926 -0.3202 38 1 3.6003 -6.5203 2.2368 39 1 3.1458 -7.7738 3.4710 40 1 1.2761 -2.6613 0.9550 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705374_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:29:08 Heat of formation + Delta-G solvation = -54.883957 kcal Electronic energy + Delta-G solvation = -27302.797349 eV Core-core repulsion = 22914.750307 eV Total energy + Delta-G solvation = -4388.047042 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.112 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.06603 -50.04358 -42.59577 -41.60753 -40.05146 -38.66256 -37.80581 -34.78818 -32.46555 -31.99147 -31.52262 -31.30383 -27.43892 -26.98541 -26.29416 -24.12257 -23.62839 -22.88472 -21.69824 -21.22355 -20.52314 -19.74940 -18.94996 -18.66925 -18.18051 -17.56555 -17.24284 -17.05147 -16.94514 -16.74717 -16.38345 -16.34781 -15.99110 -15.75989 -15.46629 -15.37207 -15.17400 -15.00549 -14.66466 -14.36152 -14.13562 -13.86465 -13.78077 -13.72515 -13.50721 -13.20758 -13.01314 -12.89484 -12.76002 -12.31795 -12.05899 -11.90899 -11.54408 -11.22638 -10.64155 -10.31373 -10.13569 -10.01873 -9.88788 -9.31222 -5.09841 -0.20091 -0.17197 0.28774 1.05270 1.44785 1.62966 1.84222 1.92342 2.02195 2.14576 2.30531 2.70218 3.08959 3.14122 3.21701 3.37357 3.41110 3.60804 3.65519 3.66849 3.71948 3.77932 3.84370 3.94207 4.02053 4.16928 4.33856 4.37273 4.47641 4.53064 4.58276 4.63322 4.68150 4.77128 4.82865 4.87179 4.87911 4.93276 5.00035 5.14468 5.35837 5.54860 5.61968 5.74468 6.12902 6.31944 6.37300 7.03678 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.060 4.060 3 Si 0.717 3.283 4 C 0.070 3.930 5 C -0.206 4.206 6 C -0.094 4.094 7 C -0.052 4.052 8 C 0.596 3.404 9 O -0.519 6.519 10 N -0.716 5.716 11 C 0.121 3.879 12 H 0.112 0.888 13 C -0.135 4.135 14 C -0.077 4.077 15 H 0.103 0.897 16 C -0.013 4.013 17 C -0.163 4.163 18 C 0.137 3.863 19 F -0.128 7.128 20 C -0.197 4.197 21 C 0.136 3.864 22 F -0.129 7.129 23 C -0.162 4.162 24 C -0.144 4.144 25 N -0.522 5.522 26 H 0.387 0.613 27 H 0.076 0.924 28 H -0.247 1.247 29 H -0.252 1.252 30 H 0.144 0.856 31 H 0.155 0.845 32 H 0.395 0.605 33 H 0.103 0.897 34 H 0.080 0.920 35 H 0.145 0.855 36 H 0.149 0.851 37 H 0.142 0.858 38 H 0.079 0.921 39 H 0.100 0.900 40 H 0.417 0.583 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.375 2.985 -6.292 7.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.170 4.170 3 Si 0.615 3.385 4 C -0.048 4.048 5 C -0.230 4.230 6 C -0.120 4.120 7 C -0.165 4.165 8 C 0.383 3.617 9 O -0.394 6.394 10 N -0.367 5.367 11 C 0.016 3.984 12 H 0.130 0.870 13 C -0.173 4.173 14 C -0.095 4.095 15 H 0.121 0.879 16 C -0.013 4.013 17 C -0.182 4.182 18 C 0.118 3.882 19 F -0.107 7.107 20 C -0.217 4.217 21 C 0.116 3.884 22 F -0.108 7.108 23 C -0.180 4.180 24 C -0.182 4.182 25 N -0.118 5.118 26 H 0.236 0.764 27 H 0.094 0.906 28 H -0.171 1.171 29 H -0.176 1.176 30 H 0.161 0.839 31 H 0.172 0.828 32 H 0.229 0.771 33 H 0.122 0.878 34 H 0.099 0.901 35 H 0.163 0.837 36 H 0.167 0.833 37 H 0.160 0.840 38 H 0.098 0.902 39 H 0.118 0.882 40 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -1.469 2.969 -4.578 5.651 hybrid contribution -0.472 -1.320 -0.747 1.588 sum -1.941 1.650 -5.325 5.903 Atomic orbital electron populations 1.86484 1.17020 1.82013 1.50116 1.24524 0.85876 1.11404 0.95154 0.95130 0.80758 0.75475 0.87110 1.19965 1.03274 0.83767 0.97805 1.20602 1.07273 0.99805 0.95353 1.21304 1.00795 0.89938 0.99994 1.20384 1.09955 0.95833 0.90301 1.16989 0.78269 0.81908 0.84499 1.90881 1.43480 1.84333 1.20735 1.45541 1.58032 1.08568 1.24535 1.21861 0.96458 0.81304 0.98787 0.87008 1.23456 0.97090 0.98886 0.97831 1.21685 0.98249 0.90680 0.98897 0.87853 1.19290 0.95020 0.95220 0.91780 1.21073 1.04660 0.90904 1.01552 1.17250 0.98560 0.87295 0.85133 1.91567 1.89780 1.69612 1.59709 1.21098 1.06212 1.01854 0.92497 1.17275 0.98178 0.91831 0.81106 1.91564 1.87743 1.89038 1.42409 1.21106 1.04437 0.93643 0.98855 1.23603 0.96700 0.99040 0.98859 1.41904 1.42770 1.09383 1.17758 0.76417 0.90631 1.17146 1.17630 0.83859 0.82777 0.77115 0.87837 0.90087 0.83716 0.83275 0.84005 0.90233 0.88188 0.74586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.06 12.86 -35.23 -0.45 0.61 16 2 C -0.06 0.12 3.07 36.01 0.11 0.23 16 3 Si 0.72 -1.87 30.56 -169.99 -5.19 -7.07 16 4 C 0.07 0.07 6.50 -81.95 -0.53 -0.47 16 5 C -0.21 -0.47 9.32 -39.98 -0.37 -0.84 16 6 C -0.09 -0.28 10.65 -39.12 -0.42 -0.70 16 7 C -0.05 -0.11 7.06 -81.98 -0.58 -0.68 16 8 C 0.60 1.44 7.79 -12.86 -0.10 1.34 16 9 O -0.52 -3.21 16.48 5.19 0.09 -3.13 16 10 N -0.72 0.91 5.26 -54.33 -0.29 0.62 16 11 C 0.12 -0.19 4.33 -67.12 -0.29 -0.49 16 12 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 13 C -0.13 0.45 7.29 -25.92 -0.19 0.26 16 14 C -0.08 0.26 3.85 -90.97 -0.35 -0.09 16 15 H 0.10 -0.47 8.09 -51.93 -0.42 -0.89 16 16 C -0.01 0.02 5.29 -104.64 -0.55 -0.53 16 17 C -0.16 0.17 8.60 -39.50 -0.34 -0.17 16 18 C 0.14 0.07 7.30 -39.42 -0.29 -0.22 16 19 F -0.13 -0.23 17.27 2.25 0.04 -0.19 16 20 C -0.20 -0.07 10.01 -39.45 -0.39 -0.47 16 21 C 0.14 0.06 7.30 -39.43 -0.29 -0.23 16 22 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 23 C -0.16 0.18 9.69 -39.50 -0.38 -0.20 16 24 C -0.14 0.33 7.25 -25.92 -0.19 0.15 16 25 N -0.52 0.08 5.99 -5.69 -0.03 0.05 16 26 H 0.39 -2.68 8.74 45.56 0.40 -2.28 16 27 H 0.08 -0.31 7.96 -51.93 -0.41 -0.72 16 28 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 29 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 30 H 0.14 0.21 6.19 -52.49 -0.32 -0.12 16 31 H 0.15 0.39 8.06 -52.49 -0.42 -0.04 16 32 H 0.40 -1.56 7.83 -40.82 -0.32 -1.88 16 33 H 0.10 -0.36 7.73 -51.92 -0.40 -0.76 16 34 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 35 H 0.15 -0.36 6.65 -52.49 -0.35 -0.71 16 36 H 0.15 -0.10 8.06 -52.49 -0.42 -0.52 16 37 H 0.14 -0.40 8.05 -52.49 -0.42 -0.83 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.10 -0.26 6.30 -51.93 -0.33 -0.59 16 40 H 0.42 -1.32 8.19 -40.82 -0.33 -1.65 16 LS Contribution 350.79 15.07 5.29 5.29 Total: 0.00 -9.31 350.79 -9.86 -19.17 By element: Atomic # 1 Polarization: -7.89 SS G_CDS: -4.19 Total: -12.08 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -5.15 Total: -3.11 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -0.32 Total: 0.67 kcal Atomic # 8 Polarization: -2.15 SS G_CDS: -0.37 Total: -2.52 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.08 Total: -0.36 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: -5.19 Total: -7.07 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -9.31 -9.86 -19.17 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705374_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.713 kcal (2) G-P(sol) polarization free energy of solvation -9.309 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.884 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds