Wall clock time and date at job start Mon Mar 8 2021 06:21:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.33813 * 122.44689 * 2 1 4 4 C 1.50695 * 124.52738 * 0.02562 * 3 2 1 5 5 O 1.42905 * 109.47427 * 113.27049 * 4 3 2 6 6 Si 1.86299 * 109.47539 * 233.27380 * 4 3 2 7 7 S 1.70620 * 110.95181 * 179.75012 * 3 2 1 8 8 C 1.75830 * 91.56308 * 0.22785 * 7 3 2 9 9 C 1.46583 * 125.45710 * 179.97438 * 8 7 3 10 10 O 1.21700 * 119.99961 * 180.02562 * 9 8 7 11 11 N 1.34777 * 120.00219 * 0.02562 * 9 8 7 12 12 C 1.46493 * 120.00034 * 180.02562 * 11 9 8 13 13 H 1.09001 * 112.84990 * 25.33277 * 12 11 9 14 14 C 1.53783 * 113.61498 * 156.52871 * 12 11 9 15 15 C 1.53776 * 87.08251 * 89.11646 * 14 12 11 16 16 H 1.08998 * 113.61270 * 270.88896 * 15 14 12 17 17 C 1.50696 * 113.61763 * 140.06483 * 15 14 12 18 18 C 1.38210 * 119.99910 * 119.99822 * 17 15 14 19 19 C 1.50701 * 120.00352 * 359.97438 * 18 17 15 20 20 C 1.38261 * 120.00072 * 180.02562 * 18 17 15 21 21 C 1.38216 * 119.99549 * 359.95871 * 20 18 17 22 22 C 1.38250 * 120.00506 * 359.97438 * 21 20 18 23 23 C 1.38217 * 119.99622 * 359.80791 * 22 21 20 24 24 C 1.53780 * 113.61597 * 254.13689 * 12 11 9 25 25 C 1.36649 * 109.08521 * 0.02562 * 8 7 3 26 26 H 1.09008 * 109.46943 * 84.84663 * 1 2 3 27 27 H 1.08995 * 109.47231 * 204.84665 * 1 2 3 28 28 H 1.08996 * 109.47056 * 324.85207 * 1 2 3 29 29 H 1.09004 * 109.47028 * 353.27189 * 4 3 2 30 30 H 0.96697 * 113.99512 * 60.00495 * 5 4 3 31 31 H 1.48502 * 109.99972 * 58.67512 * 6 4 3 32 32 H 1.48495 * 110.00181 * 179.97438 * 6 4 3 33 33 H 0.97002 * 119.99352 * 359.97438 * 11 9 8 34 34 H 1.09003 * 113.61526 * 203.66365 * 14 12 11 35 35 H 1.08997 * 113.61178 * 334.48329 * 14 12 11 36 36 H 1.08992 * 109.47273 * 89.99625 * 19 18 17 37 37 H 1.09000 * 109.46990 * 210.00090 * 19 18 17 38 38 H 1.08999 * 109.46502 * 329.99469 * 19 18 17 39 39 H 1.07993 * 120.00118 * 179.97438 * 20 18 17 40 40 H 1.08008 * 119.99626 * 180.02562 * 21 20 18 41 41 H 1.07996 * 120.00049 * 180.02562 * 22 21 20 42 42 H 1.08003 * 119.99644 * 180.23085 * 23 22 21 43 43 H 1.09002 * 113.61557 * 25.43016 * 24 12 11 44 44 H 1.08996 * 113.61984 * 156.33828 * 24 12 11 45 45 H 1.07999 * 123.35515 * 179.97438 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6356 2.5161 0.0006 5 8 1.9396 3.1625 1.2383 6 14 2.3587 3.4989 -1.4072 7 16 3.8970 0.7892 0.0069 8 6 3.5937 -0.9427 0.0029 9 6 4.6232 -1.9862 0.0053 10 8 4.3002 -3.1596 0.0017 11 7 5.9273 -1.6463 0.0117 12 6 6.9561 -2.6892 0.0136 13 1 6.6089 -3.6271 -0.4199 14 6 8.3112 -2.2188 -0.5408 15 6 8.6626 -1.7950 0.8950 16 1 8.3636 -0.7746 1.1346 17 6 10.0887 -2.0927 1.2805 18 6 10.9328 -1.0640 1.6540 19 6 10.4273 0.3555 1.6753 20 6 12.2414 -1.3371 2.0071 21 6 12.7051 -2.6390 1.9874 22 6 11.8604 -3.6682 1.6151 23 6 10.5510 -3.3957 1.2664 24 6 7.6572 -2.8605 1.3715 25 6 2.2446 -1.1601 -0.0041 26 1 -0.3633 0.0923 -1.0236 27 1 -0.3633 -0.9325 0.4318 28 1 -0.3633 0.8403 0.5916 29 1 0.5541 2.4513 -0.1195 30 1 2.8864 3.2549 1.4115 31 1 2.0769 2.8205 -2.6978 32 1 1.7850 4.8685 -1.4180 33 1 6.1847 -0.7110 0.0142 34 1 8.9326 -3.0295 -0.9212 35 1 8.2320 -1.3838 -1.2369 36 1 10.0157 0.5799 2.6593 37 1 11.2502 1.0375 1.4614 38 1 9.6502 0.4757 0.9204 39 1 12.9010 -0.5333 2.2986 40 1 13.7272 -2.8524 2.2636 41 1 12.2227 -4.6855 1.6001 42 1 9.8901 -4.2001 0.9792 43 1 7.0505 -2.5423 2.2193 44 1 8.1001 -3.8463 1.5130 45 1 1.8019 -2.1452 -0.0081 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9744652_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:27 Heat of formation + Delta-G solvation = 9.171273 kcal Electronic energy + Delta-G solvation = -26707.616544 eV Core-core repulsion = 22976.531875 eV Total energy + Delta-G solvation = -3731.084669 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.123 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.70148 -40.57352 -39.77262 -38.70940 -37.60305 -34.67131 -33.77022 -32.54436 -31.52450 -29.93665 -27.99542 -27.17196 -26.80290 -25.83666 -24.42790 -23.04519 -21.93923 -21.87855 -20.39286 -19.97469 -19.50973 -17.95345 -17.65146 -17.45362 -16.92020 -16.63332 -16.25417 -16.05013 -15.82945 -15.78763 -15.28818 -15.07899 -14.92834 -14.79929 -14.56968 -14.35311 -14.19633 -14.01573 -13.66733 -13.54114 -13.52097 -13.26320 -13.22267 -13.09393 -12.85289 -12.74958 -12.47382 -12.24836 -12.11809 -12.01059 -11.78102 -11.59784 -11.23200 -11.11703 -10.83982 -10.20211 -9.73753 -9.66601 -9.51990 -9.42989 -5.27712 -0.68282 0.25136 0.43428 0.49452 0.65256 1.01016 1.23656 1.52543 1.81768 1.93962 2.13341 2.79779 3.21686 3.36681 3.46195 3.59112 3.62559 3.70960 3.85290 3.96466 4.01256 4.03428 4.10106 4.11830 4.19889 4.34235 4.36712 4.39897 4.53929 4.56601 4.59598 4.65801 4.68111 4.70343 4.74994 4.80026 4.86479 4.89629 4.93232 4.95416 5.06449 5.16550 5.20002 5.24382 5.31500 5.45897 5.61908 5.64855 5.76215 6.12369 6.29655 6.32197 7.07069 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.097 4.097 3 C -0.231 4.231 4 C -0.034 4.034 5 O -0.532 6.532 6 Si 0.677 3.323 7 S 0.201 5.799 8 C -0.259 4.259 9 C 0.596 3.404 10 O -0.522 6.522 11 N -0.709 5.709 12 C 0.120 3.880 13 H 0.108 0.892 14 C -0.135 4.135 15 C -0.077 4.077 16 H 0.101 0.899 17 C -0.073 4.073 18 C -0.083 4.083 19 C -0.119 4.119 20 C -0.119 4.119 21 C -0.120 4.120 22 C -0.123 4.123 23 C -0.113 4.113 24 C -0.143 4.143 25 C -0.044 4.044 26 H 0.073 0.927 27 H 0.074 0.926 28 H 0.072 0.928 29 H 0.128 0.872 30 H 0.377 0.623 31 H -0.248 1.248 32 H -0.240 1.240 33 H 0.399 0.601 34 H 0.100 0.900 35 H 0.077 0.923 36 H 0.071 0.929 37 H 0.067 0.933 38 H 0.069 0.931 39 H 0.121 0.879 40 H 0.121 0.879 41 H 0.121 0.879 42 H 0.123 0.877 43 H 0.075 0.925 44 H 0.097 0.903 45 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.229 3.464 -0.557 4.768 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.110 4.110 3 C -0.350 4.350 4 C -0.147 4.147 5 O -0.337 6.337 6 Si 0.576 3.424 7 S 0.470 5.530 8 C -0.379 4.379 9 C 0.382 3.618 10 O -0.399 6.399 11 N -0.360 5.360 12 C 0.015 3.985 13 H 0.126 0.874 14 C -0.173 4.173 15 C -0.095 4.095 16 H 0.119 0.881 17 C -0.073 4.073 18 C -0.083 4.083 19 C -0.175 4.175 20 C -0.137 4.137 21 C -0.138 4.138 22 C -0.141 4.141 23 C -0.131 4.131 24 C -0.182 4.182 25 C -0.077 4.077 26 H 0.092 0.908 27 H 0.093 0.907 28 H 0.091 0.909 29 H 0.145 0.855 30 H 0.225 0.775 31 H -0.172 1.172 32 H -0.164 1.164 33 H 0.233 0.767 34 H 0.118 0.882 35 H 0.096 0.904 36 H 0.089 0.911 37 H 0.086 0.914 38 H 0.087 0.913 39 H 0.139 0.861 40 H 0.139 0.861 41 H 0.139 0.861 42 H 0.140 0.860 43 H 0.094 0.906 44 H 0.115 0.885 45 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 3.519 3.990 -1.269 5.469 hybrid contribution -1.495 -0.878 0.300 1.759 sum 2.024 3.112 -0.969 3.837 Atomic orbital electron populations 1.20626 0.89136 1.03629 1.02699 1.18700 0.98153 0.90920 1.03241 1.24451 0.98835 1.00781 1.10965 1.24654 1.03811 0.89845 0.96342 1.86579 1.29695 1.79446 1.38006 0.95142 0.90116 0.80253 0.76935 1.82596 1.02923 0.98685 1.68807 1.24475 0.97944 0.96658 1.18854 1.16901 0.81499 0.87408 0.75991 1.90866 1.81496 1.18138 1.49376 1.45510 1.05007 1.09756 1.75764 1.21889 0.86947 0.92194 0.97471 0.87435 1.23418 0.95341 1.02384 0.96106 1.21707 0.91343 1.00030 0.96415 0.88101 1.19497 0.94802 0.92993 0.99973 1.19793 0.93787 0.95572 0.99101 1.20860 1.01685 0.92499 1.02469 1.21060 0.95284 0.96891 1.00494 1.21172 0.99844 0.92930 0.99834 1.21148 0.93891 0.99288 0.99802 1.21001 0.95814 0.96089 1.00216 1.23616 0.97078 0.99826 0.97656 1.20709 0.90936 1.00069 0.96023 0.90828 0.90725 0.90921 0.85492 0.77529 1.17154 1.16359 0.76678 0.88152 0.90411 0.91060 0.91433 0.91263 0.86089 0.86096 0.86067 0.85952 0.90625 0.88497 0.82572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.08 9.48 36.01 0.34 0.42 16 2 C -0.10 -0.06 5.78 -106.45 -0.62 -0.67 16 3 C -0.23 0.09 4.82 -35.86 -0.17 -0.08 16 4 C -0.03 0.03 2.77 36.00 0.10 0.13 16 5 O -0.53 0.31 12.88 -35.23 -0.45 -0.15 16 6 Si 0.68 -1.13 32.14 -169.99 -5.46 -6.60 16 7 S 0.20 -0.40 20.84 -107.50 -2.24 -2.64 16 8 C -0.26 -0.28 6.45 -36.79 -0.24 -0.52 16 9 C 0.60 1.43 7.78 -12.90 -0.10 1.33 16 10 O -0.52 -3.20 16.46 5.19 0.09 -3.11 16 11 N -0.71 0.38 5.26 -54.36 -0.29 0.10 16 12 C 0.12 -0.08 4.29 -67.12 -0.29 -0.36 16 13 H 0.11 0.10 7.50 -51.93 -0.39 -0.29 16 14 C -0.13 0.28 7.29 -25.92 -0.19 0.09 16 15 C -0.08 0.13 3.42 -90.82 -0.31 -0.18 16 16 H 0.10 -0.26 6.08 -51.93 -0.32 -0.58 16 17 C -0.07 -0.01 5.29 -104.63 -0.55 -0.56 16 18 C -0.08 -0.02 5.88 -104.62 -0.62 -0.64 16 19 C -0.12 0.22 9.33 36.01 0.34 0.55 16 20 C -0.12 -0.07 9.70 -39.58 -0.38 -0.45 16 21 C -0.12 -0.07 10.05 -39.59 -0.40 -0.47 16 22 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 23 C -0.11 -0.03 8.63 -39.58 -0.34 -0.37 16 24 C -0.14 0.13 7.27 -25.77 -0.19 -0.06 16 25 C -0.04 -0.06 9.78 -40.43 -0.40 -0.46 16 26 H 0.07 -0.11 8.14 -51.92 -0.42 -0.53 16 27 H 0.07 -0.10 8.10 -51.93 -0.42 -0.52 16 28 H 0.07 -0.07 7.00 -51.93 -0.36 -0.43 16 29 H 0.13 -0.11 6.25 -51.93 -0.32 -0.44 16 30 H 0.38 -1.66 8.70 45.56 0.40 -1.26 16 31 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 32 H -0.24 -0.24 7.11 56.52 0.40 0.16 16 33 H 0.40 -1.16 7.82 -40.82 -0.32 -1.48 16 34 H 0.10 -0.20 7.73 -51.93 -0.40 -0.61 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.07 -0.15 8.09 -51.93 -0.42 -0.57 16 38 H 0.07 -0.20 6.34 -51.93 -0.33 -0.53 16 39 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 40 H 0.12 -0.11 8.06 -52.48 -0.42 -0.54 16 41 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 42 H 0.12 -0.14 6.65 -52.48 -0.35 -0.49 16 43 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 44 H 0.10 -0.10 6.31 -51.93 -0.33 -0.43 16 45 H 0.16 0.20 8.06 -52.49 -0.42 -0.22 16 LS Contribution 381.21 15.07 5.74 5.74 Total: 0.00 -7.56 381.21 -13.17 -20.72 By element: Atomic # 1 Polarization: -5.16 SS G_CDS: -6.14 Total: -11.30 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -4.41 Total: -2.76 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.29 Total: 0.10 kcal Atomic # 8 Polarization: -2.89 SS G_CDS: -0.37 Total: -3.26 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.46 Total: -6.60 kcal Atomic # 16 Polarization: -0.40 SS G_CDS: -2.24 Total: -2.64 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -7.56 -13.17 -20.72 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.893 kcal (2) G-P(sol) polarization free energy of solvation -7.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.338 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.167 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.722 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.171 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds