Wall clock time and date at job start Mon Mar 8 2021 06:21:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38212 * 120.00156 * 2 1 4 4 C 1.50700 * 120.00064 * 359.97438 * 3 2 1 5 5 H 1.09002 * 112.85170 * 10.92627 * 4 3 2 6 6 C 1.53787 * 113.61423 * 142.22901 * 4 3 2 7 7 C 1.53783 * 87.08072 * 139.98417 * 6 4 3 8 8 H 1.08998 * 113.68821 * 220.01195 * 7 6 4 9 9 N 1.46496 * 113.61724 * 89.11203 * 7 6 4 10 10 C 1.34774 * 119.99544 * 107.50420 * 9 7 6 11 11 O 1.21279 * 120.00472 * 0.02562 * 10 9 7 12 12 C 1.50706 * 120.00020 * 180.02562 * 10 9 7 13 13 N 1.46496 * 109.47106 * 179.97438 * 12 10 9 14 14 C 1.36829 * 125.06537 * 265.02101 * 13 12 10 15 15 C 1.34236 * 109.94062 * 179.97438 * 14 13 12 16 16 C 1.50701 * 126.49960 * 179.97438 * 15 14 13 17 17 O 1.42900 * 109.47014 * 105.02424 * 16 15 14 18 18 Si 1.86304 * 109.47168 * 345.02583 * 16 15 14 19 19 C 1.46485 * 106.99847 * 359.97438 * 15 14 13 20 20 C 1.39591 * 134.03730 * 180.02562 * 19 15 14 21 21 C 1.36659 * 119.76680 * 179.97438 * 20 19 15 22 22 C 1.38790 * 120.53049 * 0.02562 * 21 20 19 23 23 C 1.37794 * 120.66334 * 359.97438 * 22 21 20 24 24 C 1.37697 * 125.06506 * 84.72108 * 13 12 10 25 25 C 1.53776 * 113.61689 * 239.72630 * 4 3 2 26 26 C 1.38259 * 119.99832 * 179.72114 * 3 2 1 27 27 C 1.38211 * 120.00145 * 0.25445 * 26 3 2 28 28 C 1.38256 * 120.00000 * 359.97438 * 27 26 3 29 29 C 1.38217 * 120.00068 * 0.02562 * 28 27 26 30 30 H 1.09004 * 109.46773 * 89.99745 * 1 2 3 31 31 H 1.08993 * 109.47677 * 210.00024 * 1 2 3 32 32 H 1.09000 * 109.46694 * 330.00510 * 1 2 3 33 33 H 1.08998 * 113.61140 * 25.43388 * 6 4 3 34 34 H 1.09002 * 113.61226 * 254.53109 * 6 4 3 35 35 H 0.96994 * 120.00700 * 287.50539 * 9 7 6 36 36 H 1.09001 * 109.46953 * 299.99667 * 12 10 9 37 37 H 1.09000 * 109.47318 * 59.99264 * 12 10 9 38 38 H 1.08004 * 125.02875 * 359.96577 * 14 13 12 39 39 H 1.08999 * 109.47057 * 225.02531 * 16 15 14 40 40 H 0.96701 * 114.00271 * 299.99527 * 17 16 15 41 41 H 1.48499 * 110.00358 * 58.67901 * 18 16 15 42 42 H 1.48501 * 109.99888 * 180.02562 * 18 16 15 43 43 H 1.08005 * 120.11652 * 359.95871 * 20 19 15 44 44 H 1.07997 * 119.73815 * 180.02562 * 21 20 19 45 45 H 1.07990 * 119.67481 * 180.02562 * 22 21 20 46 46 H 1.07998 * 120.11437 * 179.97438 * 23 22 21 47 47 H 1.09004 * 113.61741 * 105.46510 * 25 4 3 48 48 H 1.09004 * 113.68739 * 334.57855 * 25 4 3 49 49 H 1.07997 * 119.99453 * 180.27624 * 26 3 2 50 50 H 1.07992 * 119.99992 * 180.02562 * 27 26 3 51 51 H 1.07996 * 120.00201 * 180.02562 * 28 27 26 52 52 H 1.08000 * 120.00308 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 1.4447 2.5021 -0.0006 5 1 0.3788 2.3756 0.1894 6 6 2.1010 3.5927 0.8625 7 6 1.7304 4.5865 -0.2510 8 1 2.5052 5.3258 -0.4538 9 7 0.4029 5.1838 -0.0867 10 6 0.2859 6.4736 0.2864 11 8 1.2796 7.1399 0.4855 12 6 -1.0797 7.0881 0.4560 13 7 -0.9380 8.4882 0.8632 14 6 -0.9655 8.9377 2.1553 15 6 -0.8072 10.2704 2.1798 16 6 -0.7798 11.1475 3.4050 17 8 0.5648 11.5511 3.6718 18 14 -1.4442 10.1978 4.8636 19 6 -0.6662 10.7106 0.7897 20 6 -0.4782 11.9518 0.1792 21 6 -0.3820 12.0308 -1.1817 22 6 -0.4702 10.8868 -1.9624 23 6 -0.6557 9.6515 -1.3806 24 6 -0.7515 9.5472 0.0031 25 6 1.7523 3.3905 -1.2175 26 6 3.5807 1.1969 0.0058 27 6 4.2717 -0.0001 0.0063 28 6 3.5804 -1.1974 0.0016 29 6 2.1983 -1.1974 -0.0043 30 1 -0.3633 0.0000 -1.0277 31 1 -0.3634 -0.8899 0.5138 32 1 -0.3633 0.8901 0.5138 33 1 3.1754 3.4606 0.9902 34 1 1.5813 3.7769 1.8028 35 1 -0.3918 4.6512 -0.2463 36 1 -1.6209 7.0371 -0.4887 37 1 -1.6315 6.5416 1.2208 38 1 -1.0954 8.3127 3.0265 39 1 -1.3968 12.0297 3.2342 40 1 1.1714 10.8156 3.8338 41 1 -0.6308 8.9758 5.0873 42 1 -1.4230 11.0521 6.0781 43 1 -0.4093 12.8464 0.7803 44 1 -0.2361 12.9913 -1.6535 45 1 -0.3919 10.9652 -3.0366 46 1 -0.7236 8.7671 -1.9966 47 1 0.9513 3.4115 -1.9565 48 1 2.7311 3.2041 -1.6595 49 1 4.1206 2.1322 0.0103 50 1 5.3516 -0.0001 0.0113 51 1 4.1203 -2.1327 0.0024 52 1 1.6582 -2.1327 -0.0076 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9744652_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:21:47 Heat of formation + Delta-G solvation = 59.525174 kcal Electronic energy + Delta-G solvation = -33406.266355 eV Core-core repulsion = 29110.797137 eV Total energy + Delta-G solvation = -4295.469217 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.178 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.54770 -41.61854 -40.39446 -38.85067 -38.14774 -37.66854 -34.76158 -34.04657 -33.69877 -31.82781 -31.25743 -30.23791 -28.98030 -27.82615 -26.73871 -26.32829 -25.54535 -23.82254 -23.22689 -22.66176 -21.88164 -21.79974 -20.68069 -20.11356 -18.71959 -18.53848 -17.77373 -17.58867 -17.32630 -16.84637 -16.51161 -16.37813 -16.33064 -16.12688 -15.89978 -15.55739 -15.34499 -15.10106 -14.91573 -14.78912 -14.70577 -14.52739 -14.26068 -14.09607 -13.98632 -13.78315 -13.56745 -13.45982 -13.19194 -13.15460 -12.82293 -12.75380 -12.70579 -12.56738 -12.38671 -12.06719 -12.00540 -11.74026 -11.73229 -11.52637 -11.20562 -11.16557 -10.55262 -10.45688 -10.17453 -9.69187 -9.43770 -9.15618 -8.63176 -4.89539 0.14564 0.41462 0.46371 0.64326 1.34533 1.41471 1.43216 1.61544 1.70576 1.99827 2.17107 2.78272 2.95288 3.44592 3.50094 3.57903 3.64031 3.68122 3.71051 3.75321 3.85798 3.92688 4.00149 4.04891 4.05364 4.16213 4.17112 4.22604 4.22906 4.30738 4.40855 4.50092 4.57135 4.59337 4.61706 4.72239 4.72408 4.78775 4.79617 4.82132 4.86392 4.90374 4.92845 4.97355 4.99897 5.12906 5.14291 5.17769 5.33437 5.48424 5.51396 5.61747 5.62593 5.66988 5.74054 5.75670 5.77191 6.12960 6.18968 6.23659 6.46312 6.53869 7.12774 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.093 4.093 3 C -0.082 4.082 4 C -0.065 4.065 5 H 0.121 0.879 6 C -0.143 4.143 7 C 0.119 3.881 8 H 0.076 0.924 9 N -0.692 5.692 10 C 0.493 3.507 11 O -0.573 6.573 12 C 0.088 3.912 13 N -0.465 5.465 14 C 0.075 3.925 15 C -0.216 4.216 16 C -0.057 4.057 17 O -0.556 6.556 18 Si 0.787 3.213 19 C -0.116 4.116 20 C -0.088 4.088 21 C -0.154 4.154 22 C -0.108 4.108 23 C -0.134 4.134 24 C 0.092 3.908 25 C -0.124 4.124 26 C -0.125 4.125 27 C -0.139 4.139 28 C -0.133 4.133 29 C -0.134 4.134 30 H 0.079 0.921 31 H 0.069 0.931 32 H 0.082 0.918 33 H 0.087 0.913 34 H 0.070 0.930 35 H 0.421 0.579 36 H 0.147 0.853 37 H 0.166 0.834 38 H 0.197 0.803 39 H 0.110 0.890 40 H 0.381 0.619 41 H -0.274 1.274 42 H -0.304 1.304 43 H 0.118 0.882 44 H 0.136 0.864 45 H 0.145 0.855 46 H 0.133 0.867 47 H 0.092 0.908 48 H 0.091 0.909 49 H 0.128 0.872 50 H 0.129 0.871 51 H 0.131 0.869 52 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.227 -7.838 -2.219 10.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.093 4.093 3 C -0.082 4.082 4 C -0.083 4.083 5 H 0.139 0.861 6 C -0.182 4.182 7 C 0.013 3.987 8 H 0.095 0.905 9 N -0.346 5.346 10 C 0.278 3.722 11 O -0.451 6.451 12 C -0.036 4.036 13 N -0.148 5.148 14 C -0.051 4.051 15 C -0.223 4.223 16 C -0.164 4.164 17 O -0.364 6.364 18 Si 0.690 3.310 19 C -0.120 4.120 20 C -0.107 4.107 21 C -0.173 4.173 22 C -0.127 4.127 23 C -0.154 4.154 24 C -0.014 4.014 25 C -0.162 4.162 26 C -0.143 4.143 27 C -0.157 4.157 28 C -0.151 4.151 29 C -0.152 4.152 30 H 0.097 0.903 31 H 0.088 0.912 32 H 0.100 0.900 33 H 0.105 0.895 34 H 0.089 0.911 35 H 0.260 0.740 36 H 0.165 0.835 37 H 0.184 0.816 38 H 0.214 0.786 39 H 0.128 0.872 40 H 0.229 0.771 41 H -0.200 1.200 42 H -0.232 1.232 43 H 0.136 0.864 44 H 0.154 0.846 45 H 0.163 0.837 46 H 0.151 0.849 47 H 0.110 0.890 48 H 0.110 0.890 49 H 0.145 0.855 50 H 0.147 0.853 51 H 0.149 0.851 52 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -6.669 -7.426 -1.464 10.088 hybrid contribution 1.727 -0.180 -0.222 1.750 sum -4.942 -7.606 -1.687 9.226 Atomic orbital electron populations 1.20915 0.89696 1.03636 1.03137 1.20112 0.97359 0.92503 0.99347 1.19727 0.93445 0.94608 1.00395 1.21679 1.00327 0.89544 0.96772 0.86103 1.23533 1.01688 0.95079 0.97880 1.21755 0.85470 0.94204 0.97276 0.90531 1.45460 1.09113 1.10981 1.69007 1.21542 0.92281 0.82216 0.76114 1.90806 1.40814 1.62439 1.51070 1.22013 0.94156 0.79574 1.07894 1.43428 1.61360 1.05265 1.04729 1.22010 1.01536 0.94430 0.87124 1.20704 1.14258 0.93894 0.93459 1.24724 0.86420 1.03680 1.01619 1.86553 1.19950 1.37664 1.92192 0.94189 0.88116 0.76046 0.72601 1.19337 1.06073 0.93271 0.93315 1.20450 0.99106 0.96059 0.95059 1.20914 1.03373 0.99592 0.93410 1.21131 0.99279 0.91470 1.00781 1.20254 1.05537 0.99058 0.90561 1.18399 1.03547 0.87075 0.92333 1.23333 1.03908 0.92669 0.96277 1.21196 0.94237 0.98395 1.00485 1.21371 1.00665 0.92804 1.00876 1.21402 0.94817 0.98695 1.00206 1.21326 0.94524 0.98366 1.00996 0.90280 0.91245 0.89970 0.89454 0.91131 0.74030 0.83508 0.81609 0.78648 0.87227 0.77055 1.19984 1.23238 0.86368 0.84642 0.83725 0.84868 0.88966 0.89022 0.85458 0.85295 0.85148 0.85047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.71 9.53 71.24 0.68 1.39 16 2 C -0.09 0.06 5.88 -19.86 -0.12 -0.05 16 3 C -0.08 0.08 5.29 -19.87 -0.11 -0.03 16 4 C -0.07 0.38 3.58 -11.01 -0.04 0.34 16 5 H 0.12 -1.18 5.75 -2.39 -0.01 -1.19 16 6 C -0.14 0.47 7.25 31.12 0.23 0.69 16 7 C 0.12 -0.39 4.32 45.52 0.20 -0.19 16 8 H 0.08 0.24 7.46 -2.39 -0.02 0.22 16 9 N -0.69 5.02 5.26 -440.04 -2.32 2.70 16 10 C 0.49 -0.64 7.90 87.66 0.69 0.05 16 11 O -0.57 -6.38 16.02 -3.02 -0.05 -6.43 16 12 C 0.09 -0.70 6.48 85.64 0.56 -0.15 16 13 N -0.47 -0.58 2.27 -519.99 -1.18 -1.76 16 14 C 0.07 0.08 9.89 83.00 0.82 0.90 16 15 C -0.22 -1.22 5.58 -18.63 -0.10 -1.32 16 16 C -0.06 -0.24 3.06 71.24 0.22 -0.02 16 17 O -0.56 -4.87 12.88 -148.98 -1.92 -6.79 16 18 Si 0.79 -0.83 30.82 68.60 2.11 1.29 16 19 C -0.12 -1.13 6.35 -20.20 -0.13 -1.26 16 20 C -0.09 -0.84 10.05 22.23 0.22 -0.62 16 21 C -0.15 -1.02 9.97 22.03 0.22 -0.80 16 22 C -0.11 -0.52 10.01 22.30 0.22 -0.29 16 23 C -0.13 -0.67 10.00 22.37 0.22 -0.44 16 24 C 0.09 0.64 6.79 39.03 0.27 0.90 16 25 C -0.12 0.76 7.29 31.12 0.23 0.99 16 26 C -0.13 -0.09 8.61 22.27 0.19 0.10 16 27 C -0.14 -0.22 10.05 22.27 0.22 0.01 16 28 C -0.13 -0.19 10.05 22.27 0.22 0.03 16 29 C -0.13 -0.09 9.70 22.27 0.22 0.12 16 30 H 0.08 -0.58 8.14 -2.38 -0.02 -0.60 16 31 H 0.07 -0.43 8.09 -2.39 -0.02 -0.45 16 32 H 0.08 -0.73 5.99 -2.39 -0.01 -0.75 16 33 H 0.09 -0.14 6.31 -2.39 -0.02 -0.15 16 34 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 35 H 0.42 -6.29 8.70 -92.71 -0.81 -7.10 16 36 H 0.15 -1.96 8.14 -2.39 -0.02 -1.98 16 37 H 0.17 -2.73 8.12 -2.39 -0.02 -2.75 16 38 H 0.20 -1.10 6.27 -2.91 -0.02 -1.12 16 39 H 0.11 0.42 7.96 -2.39 -0.02 0.40 16 40 H 0.38 1.48 8.70 -74.06 -0.64 0.84 16 41 H -0.27 -0.27 7.00 99.48 0.70 0.42 16 42 H -0.30 -2.09 7.11 99.48 0.71 -1.38 16 43 H 0.12 1.02 8.06 -2.91 -0.02 1.00 16 44 H 0.14 0.35 8.06 -2.91 -0.02 0.33 16 45 H 0.14 -0.04 8.06 -2.92 -0.02 -0.07 16 46 H 0.13 0.00 8.06 -2.91 -0.02 -0.02 16 47 H 0.09 -0.81 8.14 -2.38 -0.02 -0.83 16 48 H 0.09 -0.39 7.73 -2.38 -0.02 -0.41 16 49 H 0.13 -0.17 6.66 -2.91 -0.02 -0.19 16 50 H 0.13 -0.15 8.06 -2.91 -0.02 -0.17 16 51 H 0.13 -0.21 8.06 -2.91 -0.02 -0.23 16 52 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 Total: 0.00 -28.65 425.70 1.32 -27.33 By element: Atomic # 1 Polarization: -16.24 SS G_CDS: -0.46 Total: -16.71 kcal Atomic # 6 Polarization: -4.77 SS G_CDS: 5.13 Total: 0.36 kcal Atomic # 7 Polarization: 4.44 SS G_CDS: -3.50 Total: 0.95 kcal Atomic # 8 Polarization: -11.25 SS G_CDS: -1.97 Total: -13.22 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: 2.11 Total: 1.29 kcal Total: -28.65 1.32 -27.33 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9744652_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.856 kcal (2) G-P(sol) polarization free energy of solvation -28.648 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.318 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.330 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds