Wall clock time and date at job start Mon Mar 8 2021 04:33:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42905 * 109.47284 * 2 1 4 4 C 1.35901 * 116.99470 * 84.95183 * 3 2 1 5 5 C 1.38734 * 120.05372 * 174.27703 * 4 3 2 6 6 C 1.38148 * 119.94317 * 179.70061 * 5 4 3 7 7 C 1.38271 * 120.05432 * 0.59607 * 6 5 4 8 8 C 1.50699 * 119.94199 * 179.69909 * 7 6 5 9 9 O 1.42902 * 109.46438 * 119.97657 * 8 7 6 10 10 Si 1.86297 * 109.47246 * 359.97438 * 8 7 6 11 11 C 1.38266 * 120.11104 * 359.67932 * 7 6 5 12 12 C 1.38152 * 120.05471 * 0.02562 * 11 7 6 13 13 C 1.50701 * 109.46804 * 240.00436 * 2 1 3 14 14 O 1.21287 * 119.99810 * 119.99900 * 13 2 1 15 15 N 1.34773 * 120.00422 * 300.00119 * 13 2 1 16 16 C 1.46500 * 120.00297 * 180.02562 * 15 13 2 17 17 H 1.08997 * 112.85040 * 23.80032 * 16 15 13 18 18 C 1.53780 * 113.61511 * 154.99950 * 16 15 13 19 19 C 1.53775 * 87.08292 * 89.11118 * 18 16 15 20 20 H 1.09002 * 113.61793 * 270.80173 * 19 18 16 21 21 C 1.50703 * 113.61782 * 139.98101 * 19 18 16 22 22 C 1.38201 * 119.98533 * 119.99745 * 21 19 18 23 23 C 1.38342 * 120.00261 * 180.27925 * 22 21 19 24 24 Cl 1.73602 * 120.01877 * 179.72876 * 23 22 21 25 25 C 1.38448 * 119.95835 * 359.49488 * 23 22 21 26 26 Cl 1.73598 * 120.01565 * 180.25006 * 25 23 22 27 27 C 1.38343 * 119.96291 * 0.50816 * 25 23 22 28 28 C 1.38197 * 119.99951 * 359.74479 * 27 25 23 29 29 C 1.53782 * 87.08209 * 25.43437 * 19 18 16 30 30 H 1.09004 * 109.46606 * 299.99768 * 1 2 3 31 31 H 1.09000 * 109.47173 * 59.99161 * 1 2 3 32 32 H 1.08998 * 109.47466 * 179.97438 * 1 2 3 33 33 H 1.08992 * 109.47348 * 120.00242 * 2 1 3 34 34 H 1.08001 * 120.02806 * 359.97438 * 5 4 3 35 35 H 1.08004 * 119.97186 * 180.27504 * 6 5 4 36 36 H 1.08995 * 109.47283 * 239.97657 * 8 7 6 37 37 H 0.96707 * 113.99467 * 179.97438 * 9 8 7 38 38 H 1.48506 * 109.99649 * 298.67734 * 10 8 7 39 39 H 1.48495 * 110.00450 * 59.99720 * 10 8 7 40 40 H 1.07992 * 119.97065 * 179.97438 * 11 7 6 41 41 H 1.07997 * 120.02507 * 179.97438 * 12 11 7 42 42 H 0.97003 * 119.99329 * 359.97438 * 15 13 2 43 43 H 1.09009 * 113.61303 * 334.56352 * 18 16 15 44 44 H 1.08993 * 113.69418 * 203.67581 * 18 16 15 45 45 H 1.08001 * 119.99530 * 0.02562 * 22 21 19 46 46 H 1.07996 * 120.00152 * 179.76767 * 27 25 23 47 47 H 1.07997 * 119.98451 * 180.02562 * 28 27 25 48 48 H 1.08995 * 113.61531 * 89.11359 * 29 19 18 49 49 H 1.09008 * 113.61327 * 220.02154 * 29 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.1116 1.9644 1.2062 5 6 2.6777 3.2280 1.2932 6 6 2.7778 3.8558 2.5198 7 6 2.3256 3.2207 3.6617 8 6 2.4423 3.9051 4.9993 9 8 1.1409 4.0655 5.5672 10 14 3.2323 5.5772 4.7745 11 6 1.7662 1.9590 3.5784 12 6 1.6583 1.3295 2.3534 13 6 2.0323 -0.7103 -1.2305 14 8 2.7295 -0.1208 -2.0289 15 7 1.7067 -2.0006 -1.4440 16 6 2.1954 -2.6913 -2.6400 17 1 3.1009 -2.2421 -3.0478 18 6 2.2847 -4.2177 -2.4765 19 6 0.8301 -4.2771 -2.9716 20 1 0.0932 -4.1982 -2.1723 21 6 0.5572 -5.4262 -3.9076 22 6 -0.3890 -6.3774 -3.5761 23 6 -0.6356 -7.4356 -4.4324 24 17 -1.8191 -8.6345 -4.0131 25 6 0.0585 -7.5353 -5.6261 26 17 -0.2545 -8.8590 -6.7047 27 6 1.0054 -6.5823 -5.9564 28 6 1.2542 -5.5287 -5.0974 29 6 1.1041 -2.9468 -3.6929 30 1 -0.3633 0.5138 0.8901 31 1 -0.3633 0.5140 -0.8899 32 1 -0.3634 -1.0276 -0.0005 33 1 1.8933 -0.5138 0.8899 34 1 3.0358 3.7223 0.4022 35 1 3.2144 4.8413 2.5874 36 1 3.0571 3.2994 5.6649 37 1 1.1397 4.4998 6.4313 38 1 4.5988 5.4220 4.2140 39 1 2.4038 6.4129 3.8688 40 1 1.4142 1.4649 4.4718 41 1 1.2216 0.3438 2.2889 42 1 1.1493 -2.4721 -0.8053 43 1 2.4075 -4.5397 -1.4423 44 1 2.9961 -4.6899 -3.1540 45 1 -0.9330 -6.2968 -2.6466 46 1 1.5499 -6.6615 -6.8857 47 1 1.9932 -4.7847 -5.3557 48 1 1.4929 -3.0702 -4.7036 49 1 0.2736 -2.2427 -3.6407 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:33:58 Heat of formation + Delta-G solvation = -26.985677 kcal Electronic energy + Delta-G solvation = -33803.423809 eV Core-core repulsion = 28943.337234 eV Total energy + Delta-G solvation = -4860.086575 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.088 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -42.02027 -41.43700 -40.52797 -39.42101 -38.74946 -37.57756 -37.44890 -37.20861 -34.93995 -33.20727 -32.24951 -32.13963 -31.70519 -31.16924 -26.86093 -26.71355 -26.42668 -25.31472 -24.33422 -24.04676 -22.88052 -22.40390 -21.56370 -20.30495 -19.55862 -18.79720 -18.44165 -18.23898 -17.41995 -17.07862 -16.92754 -16.89624 -16.62377 -16.57108 -16.15731 -15.88545 -15.67378 -15.52635 -15.18862 -15.12529 -14.91408 -14.63348 -14.51449 -14.43731 -14.00509 -13.89190 -13.79418 -13.57946 -13.54220 -13.37049 -13.34056 -12.96561 -12.95588 -12.93359 -12.46378 -12.43534 -12.37536 -12.23233 -11.98648 -11.96821 -11.86258 -11.83225 -11.59744 -11.29791 -10.98862 -10.29397 -10.20330 -10.19408 -10.00137 -9.61249 -9.31320 -4.95818 -0.14319 0.05242 0.08207 0.19379 0.79099 1.18850 1.31795 1.33116 1.43391 1.62901 1.97893 2.34075 2.40230 2.50016 3.38257 3.40675 3.42164 3.52585 3.59222 3.64840 3.68137 3.70770 3.72233 3.78875 3.90245 3.91923 3.98789 4.08800 4.14172 4.18120 4.18763 4.36597 4.43936 4.49693 4.57362 4.61767 4.63083 4.67400 4.76393 4.81435 4.83896 4.87175 4.94773 5.00893 5.01442 5.06773 5.08555 5.12239 5.15356 5.34228 5.35216 5.52409 5.57551 5.58059 6.16628 6.39571 6.93610 7.05929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.062 3.938 3 O -0.312 6.312 4 C 0.123 3.877 5 C -0.163 4.163 6 C -0.100 4.100 7 C -0.129 4.129 8 C -0.067 4.067 9 O -0.563 6.563 10 Si 0.765 3.235 11 C -0.051 4.051 12 C -0.201 4.201 13 C 0.520 3.480 14 O -0.569 6.569 15 N -0.689 5.689 16 C 0.113 3.887 17 H 0.085 0.915 18 C -0.123 4.123 19 C -0.065 4.065 20 H 0.122 0.878 21 C -0.050 4.050 22 C -0.097 4.097 23 C -0.044 4.044 24 Cl -0.061 7.061 25 C -0.053 4.053 26 Cl -0.064 7.064 27 C -0.100 4.100 28 C -0.099 4.099 29 C -0.143 4.143 30 H 0.083 0.917 31 H 0.059 0.941 32 H 0.115 0.885 33 H 0.130 0.870 34 H 0.130 0.870 35 H 0.119 0.881 36 H 0.099 0.901 37 H 0.404 0.596 38 H -0.292 1.292 39 H -0.302 1.302 40 H 0.153 0.847 41 H 0.165 0.835 42 H 0.421 0.579 43 H 0.093 0.907 44 H 0.105 0.895 45 H 0.158 0.842 46 H 0.154 0.846 47 H 0.160 0.840 48 H 0.101 0.899 49 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.486 -1.516 8.164 8.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.003 3.997 3 O -0.225 6.225 4 C 0.078 3.922 5 C -0.181 4.181 6 C -0.117 4.117 7 C -0.130 4.130 8 C -0.177 4.177 9 O -0.373 6.373 10 Si 0.672 3.328 11 C -0.069 4.069 12 C -0.219 4.219 13 C 0.306 3.694 14 O -0.446 6.446 15 N -0.343 5.343 16 C 0.007 3.993 17 H 0.103 0.897 18 C -0.160 4.160 19 C -0.083 4.083 20 H 0.140 0.860 21 C -0.051 4.051 22 C -0.116 4.116 23 C -0.072 4.072 24 Cl -0.032 7.032 25 C -0.081 4.081 26 Cl -0.035 7.035 27 C -0.118 4.118 28 C -0.117 4.117 29 C -0.181 4.181 30 H 0.102 0.898 31 H 0.078 0.922 32 H 0.133 0.867 33 H 0.147 0.853 34 H 0.148 0.852 35 H 0.137 0.863 36 H 0.116 0.884 37 H 0.255 0.745 38 H -0.219 1.219 39 H -0.230 1.230 40 H 0.171 0.829 41 H 0.182 0.818 42 H 0.259 0.741 43 H 0.112 0.888 44 H 0.123 0.877 45 H 0.176 0.824 46 H 0.172 0.828 47 H 0.177 0.823 48 H 0.119 0.881 49 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.087 -0.987 6.246 6.324 hybrid contribution -0.456 -0.867 -0.613 1.155 sum -0.369 -1.853 5.633 5.942 Atomic orbital electron populations 1.22391 0.90379 1.05952 1.04323 1.22484 0.97258 0.81909 0.98091 1.86185 1.81480 1.27317 1.27563 1.19129 0.95708 0.92738 0.84649 1.20461 1.04346 0.94790 0.98534 1.20773 0.99919 0.98736 0.92306 1.19659 1.02893 0.96363 0.94038 1.24618 0.90393 1.09247 0.93491 1.86433 1.26383 1.83866 1.40585 0.94614 0.75021 0.76382 0.86754 1.21087 0.94468 0.93229 0.98078 1.21631 1.05939 1.02817 0.91557 1.20462 0.79558 0.82624 0.86770 1.90761 1.38974 1.66890 1.48010 1.45367 1.53249 1.10293 1.25348 1.21897 0.97875 0.93496 0.86000 0.89694 1.23403 0.95822 0.92833 1.03984 1.21679 0.98539 0.90905 0.97175 0.85990 1.19911 0.94343 0.95517 0.95294 1.21173 0.98643 0.91973 0.99793 1.20990 0.95898 0.94642 0.95628 1.98405 1.56025 1.55691 1.93053 1.21038 1.00874 0.93737 0.92403 1.98403 1.95048 1.46392 1.63625 1.21289 0.96143 0.92877 1.01539 1.21386 0.99757 0.97523 0.93016 1.23595 0.99042 0.96293 0.99183 0.89845 0.92167 0.86689 0.85317 0.85238 0.86321 0.88373 0.74522 1.21941 1.22983 0.82945 0.81778 0.74084 0.88805 0.87678 0.82439 0.82800 0.82296 0.88065 0.91006 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.15 9.07 71.98 0.65 1.80 16 2 C 0.06 -0.09 2.64 29.85 0.08 -0.01 16 3 O -0.31 -2.41 9.33 -73.40 -0.68 -3.10 16 4 C 0.12 0.78 6.60 22.51 0.15 0.93 16 5 C -0.16 -1.41 9.99 22.37 0.22 -1.18 16 6 C -0.10 -0.75 8.66 22.26 0.19 -0.55 16 7 C -0.13 -0.57 5.42 -19.85 -0.11 -0.68 16 8 C -0.07 0.08 2.81 71.24 0.20 0.28 16 9 O -0.56 0.89 12.74 -148.98 -1.90 -1.00 16 10 Si 0.76 -0.90 29.78 68.60 2.04 1.14 16 11 C -0.05 -0.08 9.60 22.26 0.21 0.14 16 12 C -0.20 -0.14 8.24 22.37 0.18 0.05 16 13 C 0.52 1.15 7.23 87.66 0.63 1.79 16 14 O -0.57 -7.87 16.10 15.99 0.26 -7.61 16 15 N -0.69 4.45 5.15 -440.03 -2.27 2.18 16 16 C 0.11 -0.63 4.32 45.52 0.20 -0.43 16 17 H 0.08 0.00 7.46 -2.39 -0.02 -0.02 16 18 C -0.12 1.26 7.29 31.12 0.23 1.49 16 19 C -0.06 0.66 3.86 -11.01 -0.04 0.62 16 20 H 0.12 -1.66 8.09 -2.39 -0.02 -1.68 16 21 C -0.05 0.31 5.29 -19.86 -0.11 0.21 16 22 C -0.10 0.36 9.49 22.29 0.21 0.57 16 23 C -0.04 -0.05 6.32 22.34 0.14 0.09 16 24 Cl -0.06 -0.18 27.96 -2.72 -0.08 -0.26 16 25 C -0.05 -0.09 6.32 22.34 0.14 0.05 16 26 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 27 C -0.10 0.24 9.83 22.28 0.22 0.46 16 28 C -0.10 0.56 8.61 22.27 0.19 0.76 16 29 C -0.14 1.02 7.25 31.12 0.23 1.25 16 30 H 0.08 -0.56 6.91 -2.38 -0.02 -0.57 16 31 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 32 H 0.11 -1.61 7.56 -2.39 -0.02 -1.63 16 33 H 0.13 -0.97 6.31 -2.39 -0.02 -0.99 16 34 H 0.13 1.09 8.06 -2.91 -0.02 1.07 16 35 H 0.12 0.84 4.87 -2.91 -0.01 0.82 16 36 H 0.10 -0.58 7.96 -2.39 -0.02 -0.60 16 37 H 0.40 -4.84 8.74 -74.05 -0.65 -5.49 16 38 H -0.29 -1.38 7.11 99.48 0.71 -0.67 16 39 H -0.30 -2.17 7.11 99.48 0.71 -1.46 16 40 H 0.15 -0.45 8.06 -2.91 -0.02 -0.48 16 41 H 0.16 -1.09 5.43 -2.91 -0.02 -1.11 16 42 H 0.42 -5.90 8.12 -92.71 -0.75 -6.65 16 43 H 0.09 -1.14 8.14 -2.38 -0.02 -1.16 16 44 H 0.10 -1.08 7.72 -2.39 -0.02 -1.10 16 45 H 0.16 -1.18 8.05 -2.91 -0.02 -1.20 16 46 H 0.15 -0.79 8.06 -2.91 -0.02 -0.82 16 47 H 0.16 -1.57 6.66 -2.91 -0.02 -1.59 16 48 H 0.10 -0.77 6.31 -2.39 -0.02 -0.79 16 49 H 0.07 -0.37 8.14 -2.38 -0.02 -0.39 16 Total: 0.00 -28.84 430.93 0.80 -28.04 By element: Atomic # 1 Polarization: -26.33 SS G_CDS: -0.33 Total: -26.66 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: 3.83 Total: 7.60 kcal Atomic # 7 Polarization: 4.45 SS G_CDS: -2.27 Total: 2.18 kcal Atomic # 8 Polarization: -9.39 SS G_CDS: -2.33 Total: -11.72 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: 2.04 Total: 1.14 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -0.15 Total: -0.59 kcal Total: -28.84 0.80 -28.04 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.052 kcal (2) G-P(sol) polarization free energy of solvation -28.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.798 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.038 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds