Wall clock time and date at job start Mon Mar 8 2021 04:34:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47093 * 2 1 4 4 C 1.50700 * 109.46963 * 120.00260 * 2 1 3 5 5 C 1.35456 * 126.06593 * 244.95765 * 4 2 1 6 6 N 1.35533 * 108.87077 * 179.76196 * 5 4 2 7 7 C 1.37645 * 108.64380 * 0.44190 * 6 5 4 8 8 C 1.46678 * 126.23256 * 179.82432 * 7 6 5 9 9 O 1.21700 * 119.99684 * 179.68827 * 8 7 6 10 10 N 1.34772 * 120.00210 * 359.69302 * 8 7 6 11 11 C 1.46506 * 120.00033 * 180.02562 * 10 8 7 12 12 H 1.08992 * 112.90684 * 336.24748 * 11 10 8 13 13 C 1.54049 * 113.61276 * 107.61836 * 11 10 8 14 14 C 1.53781 * 87.08031 * 89.07129 * 13 11 10 15 15 H 1.08999 * 113.61181 * 270.87794 * 14 13 11 16 16 C 1.50696 * 113.69134 * 139.98880 * 14 13 11 17 17 C 1.38221 * 119.98188 * 322.18698 * 16 14 13 18 18 C 1.38251 * 120.03997 * 179.72875 * 17 16 14 19 19 C 1.38300 * 119.99730 * 0.54565 * 18 17 16 20 20 Cl 1.73601 * 120.01846 * 179.70325 * 19 18 17 21 21 C 1.38487 * 119.96466 * 359.73312 * 19 18 17 22 22 Cl 1.73597 * 120.02267 * 180.02562 * 21 19 18 23 23 C 1.38247 * 119.97989 * 142.46749 * 16 14 13 24 24 C 1.53781 * 87.08070 * 25.42738 * 14 13 11 25 25 C 1.37868 * 107.53617 * 359.56639 * 7 6 5 26 26 H 0.96695 * 114.00328 * 299.99806 * 1 2 3 27 27 H 1.08996 * 109.47434 * 239.99908 * 2 1 3 28 28 H 1.48504 * 109.99687 * 178.67569 * 3 2 1 29 29 H 1.48496 * 110.00023 * 299.99870 * 3 2 1 30 30 H 1.08004 * 125.56145 * 0.07364 * 5 4 2 31 31 H 0.97003 * 125.67797 * 180.30117 * 6 5 4 32 32 H 0.97002 * 120.00078 * 359.97438 * 10 8 7 33 33 H 1.09005 * 113.62125 * 334.52173 * 13 11 10 34 34 H 1.09003 * 113.61268 * 203.61961 * 13 11 10 35 35 H 1.08004 * 119.98051 * 0.02562 * 17 16 14 36 36 H 1.07994 * 119.99994 * 180.25463 * 18 17 16 37 37 H 1.07998 * 120.00324 * 359.97041 * 23 16 14 38 38 H 1.09002 * 113.61445 * 89.11830 * 24 14 13 39 39 H 1.09002 * 113.61408 * 219.93560 * 24 14 13 40 40 H 1.08000 * 126.46069 * 180.30142 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6341 -0.1501 2.2438 6 7 2.9011 -1.1020 3.1709 7 6 2.3692 -2.2965 2.7410 8 6 2.4377 -3.5802 3.4473 9 8 1.9202 -4.5695 2.9630 10 7 3.0735 -3.6641 4.6327 11 6 3.1423 -4.9464 5.3378 12 1 2.3411 -5.6293 5.0556 13 6 4.5417 -5.5899 5.3131 14 6 4.8397 -4.8039 6.6008 15 1 5.2518 -3.8110 6.4207 16 6 5.6254 -5.5875 7.6204 17 6 5.3756 -6.9352 7.7980 18 6 6.0996 -7.6565 8.7291 19 6 7.0667 -7.0270 9.4914 20 17 7.9708 -7.9305 10.6662 21 6 7.3131 -5.6753 9.3176 22 17 8.5271 -4.8838 10.2731 23 6 6.5917 -4.9565 8.3816 24 6 3.3236 -4.8042 6.8583 25 6 1.7554 -2.0654 1.5283 26 1 -0.3933 0.4416 0.7650 27 1 1.7924 -0.5138 -0.8899 28 1 3.5346 1.7702 0.0323 29 1 1.5615 2.4679 -1.2085 30 1 2.9287 0.8872 2.3055 31 1 3.3881 -0.9648 3.9986 32 1 3.4862 -2.8756 5.0185 33 1 5.1495 -5.2812 4.4625 34 1 4.5279 -6.6707 5.4545 35 1 4.6177 -7.4263 7.2057 36 1 5.9067 -8.7104 8.8645 37 1 6.7837 -3.9025 8.2452 38 1 2.9767 -5.6701 7.4223 39 1 2.9482 -3.8616 7.2566 40 1 1.2359 -2.7933 0.9229 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:34:04 Heat of formation + Delta-G solvation = 19.945581 kcal Electronic energy + Delta-G solvation = -26542.070760 eV Core-core repulsion = 22376.576937 eV Total energy + Delta-G solvation = -4165.493824 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.053 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.49585 -41.51622 -40.28525 -38.99131 -37.62430 -37.58100 -37.44578 -34.72277 -32.56920 -32.15305 -31.58145 -30.56434 -26.90491 -26.71323 -26.05700 -24.38499 -23.95612 -22.69747 -21.29794 -20.80700 -20.38999 -19.82241 -18.54978 -17.49705 -17.37690 -17.05028 -16.68999 -16.60241 -16.44565 -15.91687 -15.70013 -15.61706 -15.24097 -15.12660 -14.86247 -14.64885 -14.52481 -14.35736 -13.92667 -13.74371 -13.59586 -13.47047 -13.36420 -12.96416 -12.93795 -12.44387 -12.38243 -12.25990 -11.97093 -11.96403 -11.86413 -11.60594 -11.34945 -11.29714 -10.32181 -10.25498 -10.00545 -9.93998 -9.61925 -9.27371 -4.92604 -0.14754 0.04664 0.36331 0.78761 1.18492 1.42868 1.53711 1.74724 1.91184 2.10682 2.15138 2.24849 2.33848 3.39752 3.51512 3.63866 3.67146 3.70412 3.80271 3.89905 3.98248 4.00138 4.07806 4.17655 4.19458 4.35905 4.38307 4.59980 4.65997 4.67178 4.75946 4.80193 4.85882 4.91612 4.93685 4.99879 5.04463 5.06224 5.11472 5.33535 5.54904 5.57393 5.60465 5.74219 6.35836 6.54153 6.92329 7.06357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.053 4.053 3 Si 0.803 3.197 4 C -0.229 4.229 5 C 0.062 3.938 6 N -0.514 5.514 7 C -0.069 4.069 8 C 0.591 3.409 9 O -0.575 6.575 10 N -0.696 5.696 11 C 0.113 3.887 12 H 0.089 0.911 13 C -0.143 4.143 14 C -0.065 4.065 15 H 0.119 0.881 16 C -0.051 4.051 17 C -0.098 4.098 18 C -0.100 4.100 19 C -0.053 4.053 20 Cl -0.063 7.063 21 C -0.044 4.044 22 Cl -0.060 7.060 23 C -0.097 4.097 24 C -0.122 4.122 25 C -0.106 4.106 26 H 0.393 0.607 27 H 0.090 0.910 28 H -0.274 1.274 29 H -0.311 1.311 30 H 0.217 0.783 31 H 0.438 0.562 32 H 0.412 0.588 33 H 0.068 0.932 34 H 0.103 0.897 35 H 0.160 0.840 36 H 0.155 0.845 37 H 0.158 0.842 38 H 0.106 0.894 39 H 0.092 0.908 40 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.345 6.473 4.314 7.787 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.162 4.162 3 Si 0.708 3.292 4 C -0.236 4.236 5 C -0.076 4.076 6 N -0.111 5.111 7 C -0.182 4.182 8 C 0.380 3.620 9 O -0.454 6.454 10 N -0.347 5.347 11 C 0.007 3.993 12 H 0.107 0.893 13 C -0.181 4.181 14 C -0.083 4.083 15 H 0.137 0.863 16 C -0.051 4.051 17 C -0.116 4.116 18 C -0.118 4.118 19 C -0.081 4.081 20 Cl -0.034 7.034 21 C -0.072 4.072 22 Cl -0.031 7.031 23 C -0.116 4.116 24 C -0.160 4.160 25 C -0.133 4.133 26 H 0.243 0.757 27 H 0.107 0.893 28 H -0.201 1.201 29 H -0.240 1.240 30 H 0.234 0.766 31 H 0.280 0.720 32 H 0.249 0.751 33 H 0.087 0.913 34 H 0.121 0.879 35 H 0.178 0.822 36 H 0.173 0.827 37 H 0.175 0.825 38 H 0.125 0.875 39 H 0.111 0.889 40 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 0.829 5.979 3.418 6.937 hybrid contribution 0.739 -0.755 0.281 1.093 sum 1.568 5.224 3.699 6.590 Atomic orbital electron populations 1.86458 1.18243 1.82393 1.50318 1.24732 0.84492 1.11191 0.95773 0.93959 0.77207 0.73134 0.84922 1.19950 1.09051 0.94414 1.00164 1.22389 1.00413 0.95926 0.88887 1.41842 1.43095 1.06324 1.19866 1.20084 1.11872 0.86776 0.99474 1.17226 0.77542 0.86428 0.80783 1.90858 1.48743 1.37995 1.67817 1.45353 1.56446 1.12550 1.20388 1.21952 0.98591 0.85437 0.93283 0.89321 1.23646 0.96046 1.01180 0.97269 1.21653 0.94545 0.99482 0.92603 0.86279 1.19897 0.95084 0.94024 0.96106 1.21390 0.99428 0.93696 0.97122 1.21299 0.93880 1.01758 0.94879 1.21043 0.98797 0.91261 0.96956 1.98404 1.73829 1.74249 1.56951 1.20991 0.96164 0.91744 0.98296 1.98405 1.54070 1.79815 1.70857 1.21167 0.95053 1.01315 0.94042 1.23404 0.93818 1.05069 0.93695 1.21226 1.00380 0.96622 0.95112 0.75680 0.89260 1.20089 1.23999 0.76621 0.72049 0.75055 0.91318 0.87902 0.82234 0.82743 0.82471 0.87539 0.88927 0.86055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.25 12.88 -148.98 -1.92 -3.17 16 2 C -0.05 0.00 3.02 71.24 0.22 0.22 16 3 Si 0.80 -4.20 30.60 68.60 2.10 -2.10 16 4 C -0.23 0.15 5.43 -20.12 -0.11 0.04 16 5 C 0.06 -0.51 10.45 83.48 0.87 0.37 16 6 N -0.51 4.49 5.99 -183.62 -1.10 3.39 16 7 C -0.07 -0.05 7.06 40.35 0.28 0.23 16 8 C 0.59 2.01 7.79 86.45 0.67 2.69 16 9 O -0.57 -7.82 16.48 -4.35 -0.07 -7.89 16 10 N -0.70 3.93 5.26 -443.55 -2.33 1.60 16 11 C 0.11 -0.61 4.34 45.61 0.20 -0.42 16 12 H 0.09 -0.02 7.46 -2.39 -0.02 -0.04 16 13 C -0.14 1.00 7.27 31.21 0.23 1.23 16 14 C -0.06 0.66 3.85 -11.01 -0.04 0.62 16 15 H 0.12 -1.61 8.09 -2.39 -0.02 -1.63 16 16 C -0.05 0.33 5.29 -19.87 -0.11 0.22 16 17 C -0.10 0.59 8.60 22.27 0.19 0.78 16 18 C -0.10 0.27 9.83 22.29 0.22 0.49 16 19 C -0.05 -0.07 6.32 22.34 0.14 0.07 16 20 Cl -0.06 -0.23 27.96 -2.72 -0.08 -0.31 16 21 C -0.04 -0.04 6.32 22.35 0.14 0.11 16 22 Cl -0.06 -0.16 27.96 -2.72 -0.08 -0.24 16 23 C -0.10 0.38 9.49 22.29 0.21 0.59 16 24 C -0.12 1.27 7.28 31.12 0.23 1.49 16 25 C -0.11 -0.56 10.59 22.57 0.24 -0.32 16 26 H 0.39 -2.66 8.70 -74.06 -0.64 -3.30 16 27 H 0.09 0.29 7.96 -2.39 -0.02 0.27 16 28 H -0.27 0.62 7.11 99.48 0.71 1.32 16 29 H -0.31 -1.28 7.11 99.48 0.71 -0.58 16 30 H 0.22 -3.57 6.21 -2.91 -0.02 -3.59 16 31 H 0.44 -7.43 8.19 -92.71 -0.76 -8.19 16 32 H 0.41 -5.43 7.83 -92.71 -0.73 -6.16 16 33 H 0.07 -0.31 8.14 -2.38 -0.02 -0.33 16 34 H 0.10 -0.80 6.33 -2.39 -0.02 -0.81 16 35 H 0.16 -1.63 6.68 -2.91 -0.02 -1.65 16 36 H 0.15 -0.85 8.06 -2.91 -0.02 -0.87 16 37 H 0.16 -1.23 8.05 -2.91 -0.02 -1.25 16 38 H 0.11 -1.13 7.71 -2.39 -0.02 -1.14 16 39 H 0.09 -1.13 8.14 -2.39 -0.02 -1.15 16 40 H 0.12 1.21 8.06 -2.91 -0.02 1.19 16 Total: 0.00 -27.38 369.91 -0.85 -28.23 By element: Atomic # 1 Polarization: -26.95 SS G_CDS: -0.95 Total: -27.90 kcal Atomic # 6 Polarization: 4.82 SS G_CDS: 3.58 Total: 8.40 kcal Atomic # 7 Polarization: 8.42 SS G_CDS: -3.43 Total: 4.99 kcal Atomic # 8 Polarization: -9.07 SS G_CDS: -1.99 Total: -11.06 kcal Atomic # 14 Polarization: -4.20 SS G_CDS: 2.10 Total: -2.10 kcal Atomic # 17 Polarization: -0.39 SS G_CDS: -0.15 Total: -0.55 kcal Total: -27.38 -0.85 -28.23 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.173 kcal (2) G-P(sol) polarization free energy of solvation -27.382 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.845 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.227 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds