Wall clock time and date at job start Mon Mar 8 2021 04:34:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.35532 * 125.67510 * 2 1 4 4 C 1.35451 * 108.86822 * 179.97438 * 3 2 1 5 5 C 1.50710 * 126.06608 * 179.97438 * 4 3 2 6 6 O 1.42901 * 109.46947 * 244.97406 * 5 4 3 7 7 Si 1.86299 * 109.46899 * 4.97334 * 5 4 3 8 8 C 1.39832 * 107.86894 * 359.77510 * 4 3 2 9 9 C 1.37649 * 125.67847 * 179.97438 * 2 1 3 10 10 C 1.46680 * 126.23398 * 359.96315 * 9 2 1 11 11 O 1.21694 * 120.00159 * 354.64918 * 10 9 2 12 12 N 1.34770 * 120.00155 * 174.64830 * 10 9 2 13 13 C 1.46506 * 120.00167 * 185.19471 * 12 10 9 14 14 H 1.08996 * 112.85015 * 25.32836 * 13 12 10 15 15 C 1.53779 * 113.61628 * 156.52893 * 13 12 10 16 16 C 1.53775 * 87.08435 * 89.11203 * 15 13 12 17 17 H 1.09000 * 113.61744 * 270.80361 * 16 15 13 18 18 C 1.50699 * 113.61504 * 139.98040 * 16 15 13 19 19 C 1.38202 * 119.98025 * 299.72806 * 18 16 15 20 20 C 1.38349 * 120.00002 * 179.72846 * 19 18 16 21 21 Cl 1.73596 * 120.02081 * 180.27323 * 20 19 18 22 22 C 1.38448 * 119.96015 * 0.54513 * 20 19 18 23 23 Cl 1.73600 * 120.02045 * 179.75158 * 22 20 19 24 24 C 1.38347 * 119.96190 * 359.72862 * 22 20 19 25 25 C 1.38211 * 119.99763 * 359.97438 * 24 22 20 26 26 C 1.53777 * 113.61106 * 254.13425 * 13 12 10 27 27 H 1.08996 * 109.47476 * 273.96551 * 1 2 3 28 28 H 1.08999 * 109.47151 * 33.96931 * 1 2 3 29 29 H 1.09007 * 109.46783 * 153.96508 * 1 2 3 30 30 H 1.08000 * 125.56789 * 0.02562 * 3 2 1 31 31 H 1.08993 * 109.46872 * 124.97266 * 5 4 3 32 32 H 0.96699 * 113.99504 * 60.00432 * 6 5 4 33 33 H 1.48508 * 109.99848 * 58.68106 * 7 5 4 34 34 H 1.48499 * 109.99624 * 179.97438 * 7 5 4 35 35 H 1.08002 * 126.46336 * 180.23254 * 8 4 3 36 36 H 0.97000 * 119.99944 * 5.18954 * 12 10 9 37 37 H 1.08998 * 113.61824 * 203.66624 * 15 13 12 38 38 H 1.09007 * 113.61469 * 334.47914 * 15 13 12 39 39 H 1.07995 * 120.00130 * 0.02562 * 19 18 16 40 40 H 1.07995 * 120.00373 * 180.02562 * 24 22 20 41 41 H 1.08006 * 119.97703 * 179.97438 * 25 24 22 42 42 H 1.08999 * 113.62007 * 25.43058 * 26 13 12 43 43 H 1.09001 * 113.61381 * 156.33341 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5521 0.7093 0.0006 5 6 4.7537 1.6190 0.0002 6 8 5.4778 1.4512 -1.2203 7 14 4.1926 3.3890 0.1511 8 6 3.5780 -0.6887 0.0062 9 6 2.2679 -1.1181 0.0005 10 6 1.8125 -2.5124 0.0019 11 8 0.6262 -2.7650 0.1010 12 7 2.7078 -3.5139 -0.1066 13 6 2.2466 -4.8998 -0.2199 14 1 1.2426 -4.9791 -0.6366 15 6 3.2669 -5.8359 -0.8888 16 6 3.8409 -6.0856 0.5158 17 1 4.6209 -5.3795 0.8006 18 6 4.2317 -7.5200 0.7621 19 6 3.2799 -8.5188 0.6810 20 6 3.6394 -9.8364 0.9015 21 17 2.4458 -11.0922 0.7927 22 6 4.9505 -10.1523 1.2145 23 17 5.4020 -11.8045 1.4978 24 6 5.9008 -9.1506 1.3009 25 6 5.5412 -7.8355 1.0742 26 6 2.4475 -5.7226 1.0636 27 1 -0.3634 0.0711 1.0251 28 1 -0.3633 0.8523 -0.5742 29 1 -0.3633 -0.9235 -0.4511 30 1 1.9082 2.1236 0.0004 31 1 5.3987 1.3692 0.8426 32 1 4.9643 1.6565 -2.0135 33 1 3.4110 3.5692 1.4010 34 1 5.3683 4.2961 0.1526 35 1 4.4584 -1.3144 0.0115 36 1 3.6576 -3.3170 -0.1098 37 1 2.8175 -6.7204 -1.3404 38 1 3.9566 -5.3227 -1.5589 39 1 2.2566 -8.2712 0.4407 40 1 6.9239 -9.3963 1.5446 41 1 6.2833 -7.0537 1.1422 42 1 2.4771 -5.1179 1.9700 43 1 1.7745 -6.5762 1.1450 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:34:08 Heat of formation + Delta-G solvation = 28.748866 kcal Electronic energy + Delta-G solvation = -28879.681635 eV Core-core repulsion = 24559.031931 eV Total energy + Delta-G solvation = -4320.649704 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.069 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.56193 -41.52147 -40.25612 -38.94771 -37.63745 -37.58054 -37.43995 -34.88285 -33.71109 -31.97924 -31.89890 -30.58979 -28.31197 -26.72678 -26.43380 -25.63002 -24.32179 -23.75318 -22.66338 -21.27696 -20.66596 -20.06645 -18.87441 -18.52872 -17.72810 -17.22525 -16.97140 -16.73877 -16.64952 -16.51556 -15.94581 -15.67037 -15.60013 -15.31579 -15.16236 -15.09089 -14.90904 -14.56222 -14.40128 -14.06817 -13.74204 -13.60681 -13.47917 -13.43251 -13.23252 -13.13120 -12.95625 -12.91294 -12.42844 -12.29305 -12.25431 -12.05404 -11.91691 -11.83284 -11.59877 -11.27494 -11.16874 -10.27899 -10.20100 -9.99138 -9.68860 -9.61491 -9.24708 -4.93641 -0.13171 0.04557 0.40597 0.78969 1.18722 1.43538 1.53219 1.59396 1.74214 2.06254 2.27008 2.30079 2.35095 3.39632 3.55163 3.61304 3.63679 3.69430 3.75028 3.85902 3.89990 4.04600 4.06103 4.10367 4.23776 4.25624 4.26685 4.37523 4.42557 4.57809 4.68464 4.69847 4.73788 4.76505 4.79016 4.82510 4.86527 4.96835 5.00811 5.03542 5.14333 5.21590 5.37812 5.54435 5.60230 5.69554 5.90464 6.17740 6.45506 6.93179 7.11152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.413 5.413 3 C 0.034 3.966 4 C -0.220 4.220 5 C -0.034 4.034 6 O -0.559 6.559 7 Si 0.776 3.224 8 C -0.110 4.110 9 C -0.079 4.079 10 C 0.589 3.411 11 O -0.582 6.582 12 N -0.689 5.689 13 C 0.119 3.881 14 H 0.088 0.912 15 C -0.124 4.124 16 C -0.064 4.064 17 H 0.124 0.876 18 C -0.052 4.052 19 C -0.101 4.101 20 C -0.044 4.044 21 Cl -0.062 7.062 22 C -0.053 4.053 23 Cl -0.063 7.063 24 C -0.100 4.100 25 C -0.094 4.094 26 C -0.145 4.145 27 H 0.079 0.921 28 H 0.115 0.885 29 H 0.086 0.914 30 H 0.201 0.799 31 H 0.102 0.898 32 H 0.393 0.607 33 H -0.286 1.286 34 H -0.305 1.305 35 H 0.159 0.841 36 H 0.416 0.584 37 H 0.102 0.898 38 H 0.094 0.906 39 H 0.151 0.849 40 H 0.157 0.843 41 H 0.166 0.834 42 H 0.068 0.932 43 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.130 5.516 -2.840 6.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.085 5.085 3 C -0.103 4.103 4 C -0.226 4.226 5 C -0.145 4.145 6 O -0.367 6.367 7 Si 0.682 3.318 8 C -0.137 4.137 9 C -0.192 4.192 10 C 0.379 3.621 11 O -0.464 6.464 12 N -0.340 5.340 13 C 0.014 3.986 14 H 0.106 0.894 15 C -0.161 4.161 16 C -0.082 4.082 17 H 0.142 0.858 18 C -0.052 4.052 19 C -0.120 4.120 20 C -0.072 4.072 21 Cl -0.033 7.033 22 C -0.080 4.080 23 Cl -0.034 7.034 24 C -0.118 4.118 25 C -0.112 4.112 26 C -0.183 4.183 27 H 0.098 0.902 28 H 0.133 0.867 29 H 0.105 0.895 30 H 0.217 0.783 31 H 0.120 0.880 32 H 0.243 0.757 33 H -0.213 1.213 34 H -0.234 1.234 35 H 0.176 0.824 36 H 0.254 0.746 37 H 0.121 0.879 38 H 0.113 0.887 39 H 0.169 0.831 40 H 0.175 0.825 41 H 0.184 0.816 42 H 0.087 0.913 43 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.298 5.561 -1.906 5.886 hybrid contribution 0.359 -1.105 0.611 1.313 sum 0.658 4.456 -1.295 4.687 Atomic orbital electron populations 1.22437 0.74927 1.06072 1.04527 1.44029 1.07611 1.04860 1.51957 1.22333 0.89800 0.92512 1.05614 1.19894 0.94148 0.94850 1.13728 1.24404 0.92480 1.08027 0.89553 1.86444 1.42107 1.92147 1.15979 0.94038 0.80200 0.72759 0.84758 1.21425 0.94264 0.95175 1.02814 1.20056 0.90968 0.87521 1.20667 1.17174 0.85285 0.84252 0.75408 1.90786 1.17894 1.85339 1.52368 1.45201 1.10085 1.05012 1.73682 1.21847 0.99321 0.79795 0.97634 0.89393 1.23388 0.97581 0.99344 0.95835 1.21721 0.97676 0.91655 0.97173 0.85843 1.19906 0.92890 0.95338 0.97069 1.21061 1.01667 0.89098 1.00129 1.20947 0.89167 0.91150 1.05886 1.98403 1.56080 1.52232 1.96556 1.21046 0.93528 0.87322 1.06145 1.98401 1.92562 1.17895 1.94526 1.21340 0.99713 0.91633 0.99129 1.21493 0.96498 0.96095 0.97080 1.23626 0.96643 1.00182 0.97887 0.90248 0.86700 0.89537 0.78266 0.88040 0.75711 1.21304 1.23350 0.82363 0.74612 0.87921 0.88749 0.83128 0.82524 0.81614 0.91291 0.88538 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.15 10.64 127.77 1.36 1.21 16 2 N -0.41 -0.16 3.16 -534.30 -1.69 -1.85 16 3 C 0.03 -0.11 9.94 83.48 0.83 0.72 16 4 C -0.22 0.36 5.43 -20.12 -0.11 0.25 16 5 C -0.03 0.08 3.02 71.24 0.22 0.30 16 6 O -0.56 0.88 12.88 -148.98 -1.92 -1.04 16 7 Si 0.78 -3.27 30.60 68.60 2.10 -1.17 16 8 C -0.11 0.07 10.29 22.57 0.23 0.31 16 9 C -0.08 -0.17 6.88 40.35 0.28 0.10 16 10 C 0.59 2.35 7.77 86.45 0.67 3.02 16 11 O -0.58 -6.26 14.32 -4.33 -0.06 -6.32 16 12 N -0.69 1.94 5.25 -444.01 -2.33 -0.39 16 13 C 0.12 -0.41 4.26 45.51 0.19 -0.21 16 14 H 0.09 0.07 7.57 -2.39 -0.02 0.06 16 15 C -0.12 0.97 7.29 31.12 0.23 1.20 16 16 C -0.06 0.51 3.87 -10.92 -0.04 0.46 16 17 H 0.12 -1.38 8.09 -2.39 -0.02 -1.40 16 18 C -0.05 0.24 5.29 -19.87 -0.11 0.13 16 19 C -0.10 0.15 8.41 22.29 0.19 0.34 16 20 C -0.04 -0.11 6.32 22.35 0.14 0.03 16 21 Cl -0.06 -0.28 27.96 -2.72 -0.08 -0.36 16 22 C -0.05 -0.13 6.32 22.35 0.14 0.01 16 23 Cl -0.06 -0.28 27.96 -2.72 -0.08 -0.36 16 24 C -0.10 0.21 9.83 22.29 0.22 0.43 16 25 C -0.09 0.51 9.71 22.27 0.22 0.72 16 26 C -0.14 0.63 7.27 31.21 0.23 0.86 16 27 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 28 H 0.11 -1.00 8.14 -2.39 -0.02 -1.02 16 29 H 0.09 0.18 6.22 -2.38 -0.01 0.17 16 30 H 0.20 -1.94 6.21 -2.91 -0.02 -1.96 16 31 H 0.10 -0.09 7.96 -2.39 -0.02 -0.11 16 32 H 0.39 -3.66 8.70 -74.06 -0.64 -4.30 16 33 H -0.29 -0.17 7.11 99.48 0.71 0.54 16 34 H -0.31 -1.27 7.11 99.48 0.71 -0.56 16 35 H 0.16 -0.75 7.45 -2.91 -0.02 -0.77 16 36 H 0.42 -3.32 7.61 -92.71 -0.71 -4.02 16 37 H 0.10 -0.78 7.73 -2.39 -0.02 -0.80 16 38 H 0.09 -0.91 8.14 -2.38 -0.02 -0.93 16 39 H 0.15 -0.56 6.64 -2.91 -0.02 -0.58 16 40 H 0.16 -0.84 8.06 -2.91 -0.02 -0.87 16 41 H 0.17 -1.83 8.05 -2.91 -0.02 -1.85 16 42 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 43 H 0.10 -0.41 6.30 -2.39 -0.02 -0.42 16 Total: 0.00 -21.43 388.05 0.60 -20.83 By element: Atomic # 1 Polarization: -19.00 SS G_CDS: -0.22 Total: -19.22 kcal Atomic # 6 Polarization: 5.00 SS G_CDS: 4.88 Total: 9.88 kcal Atomic # 7 Polarization: 1.78 SS G_CDS: -4.02 Total: -2.24 kcal Atomic # 8 Polarization: -5.38 SS G_CDS: -1.98 Total: -7.36 kcal Atomic # 14 Polarization: -3.27 SS G_CDS: 2.10 Total: -1.17 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -0.15 Total: -0.71 kcal Total: -21.43 0.60 -20.83 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.577 kcal (2) G-P(sol) polarization free energy of solvation -21.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.604 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.828 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds