Wall clock time and date at job start Mon Mar 8 2021 04:34:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37649 * 125.67584 * 2 1 4 4 C 1.46685 * 126.23773 * 0.02562 * 3 2 1 5 5 O 1.21695 * 119.99527 * 5.16694 * 4 3 2 6 6 N 1.34772 * 120.00182 * 185.16764 * 4 3 2 7 7 C 1.46498 * 120.00040 * 174.64264 * 6 4 3 8 8 H 1.08996 * 112.90697 * 23.74634 * 7 6 4 9 9 C 1.53778 * 113.61408 * 155.00104 * 7 6 4 10 10 C 1.53774 * 87.08391 * 89.11509 * 9 7 6 11 11 H 1.08996 * 113.61570 * 270.79932 * 10 9 7 12 12 C 1.50708 * 113.61780 * 139.97897 * 10 9 7 13 13 C 1.38207 * 119.97789 * 299.98315 * 12 10 9 14 14 C 1.38343 * 119.99765 * 180.02562 * 13 12 10 15 15 Cl 1.73602 * 120.01944 * 179.97438 * 14 13 12 16 16 C 1.38446 * 119.96211 * 0.02562 * 14 13 12 17 17 Cl 1.73605 * 120.02110 * 179.97438 * 16 14 13 18 18 C 1.38348 * 119.96369 * 359.97438 * 16 14 13 19 19 C 1.38212 * 119.99548 * 0.02562 * 18 16 14 20 20 C 1.53780 * 87.08139 * 25.43341 * 10 9 7 21 21 C 1.37874 * 107.53115 * 180.28248 * 3 2 1 22 22 C 1.39832 * 107.08403 * 359.58873 * 21 3 2 23 23 C 1.35450 * 107.86556 * 0.41285 * 22 21 3 24 24 C 1.50697 * 125.56427 * 179.71937 * 23 22 21 25 25 O 1.42905 * 109.47308 * 210.02436 * 24 23 22 26 26 Si 1.86296 * 109.47243 * 330.02486 * 24 23 22 27 27 H 1.08999 * 109.47173 * 92.14034 * 1 2 3 28 28 H 1.08998 * 109.47446 * 212.14898 * 1 2 3 29 29 H 1.09007 * 109.46974 * 332.14256 * 1 2 3 30 30 H 0.97005 * 120.00203 * 354.63890 * 6 4 3 31 31 H 1.09005 * 113.61839 * 334.56364 * 9 7 6 32 32 H 1.09008 * 113.61406 * 203.66497 * 9 7 6 33 33 H 1.07997 * 120.00206 * 0.03971 * 13 12 10 34 34 H 1.07997 * 120.00165 * 180.02562 * 18 16 14 35 35 H 1.08003 * 119.97541 * 179.72207 * 19 18 16 36 36 H 1.08994 * 113.61776 * 89.11835 * 20 10 9 37 37 H 1.09005 * 113.61211 * 220.02278 * 20 10 9 38 38 H 1.07999 * 126.45651 * 179.73968 * 21 3 2 39 39 H 1.08002 * 126.06856 * 180.16034 * 22 21 3 40 40 H 1.09003 * 109.47315 * 90.02991 * 24 23 22 41 41 H 0.96709 * 113.99846 * 59.99874 * 25 24 23 42 42 H 1.48496 * 109.99825 * 58.68402 * 26 24 23 43 43 H 1.48504 * 109.99875 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8124 2.5125 0.0005 5 8 0.6257 2.7650 0.0959 6 7 2.7081 3.5140 -0.1047 7 6 2.2472 4.8996 -0.2224 8 1 1.2481 5.0506 0.1864 9 6 3.2751 5.9342 0.2653 10 6 3.8311 5.9413 -1.1684 11 1 4.6080 5.1962 -1.3391 12 6 4.2176 7.3127 -1.6594 13 6 3.2671 8.3135 -1.7318 14 6 3.6214 9.5725 -2.1830 15 17 2.4278 10.8298 -2.2748 16 6 4.9280 9.8287 -2.5622 17 17 5.3740 11.4078 -3.1291 18 6 5.8781 8.8258 -2.4890 19 6 5.5224 7.5686 -2.0381 20 6 2.4337 5.4935 -1.6285 21 6 3.5779 0.6888 -0.0065 22 6 3.5521 -0.7093 -0.0008 23 6 2.2555 -1.1009 -0.0005 24 6 1.7709 -2.5278 -0.0011 25 8 0.5128 -2.6034 -0.6747 26 14 3.0114 -3.6046 -0.8799 27 1 -0.3633 -0.0384 -1.0269 28 1 -0.3634 -0.8701 0.5468 29 1 -0.3633 0.9086 0.4802 30 1 3.6580 3.3174 -0.1024 31 1 3.9745 5.5408 1.0029 32 1 2.8306 6.8831 0.5659 33 1 2.2480 8.1129 -1.4361 34 1 6.8976 9.0251 -2.7843 35 1 6.2634 6.7846 -1.9853 36 1 1.7593 6.3218 -1.8457 37 1 2.4539 4.7441 -2.4199 38 1 4.4583 1.3144 -0.0122 39 1 4.4132 -1.3612 -0.0012 40 1 1.6540 -2.8724 1.0264 41 1 0.5419 -2.3115 -1.5963 42 1 4.3322 -3.5101 -0.2077 43 1 2.5454 -5.0146 -0.8868 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:34:13 Heat of formation + Delta-G solvation = 29.185897 kcal Electronic energy + Delta-G solvation = -28972.302990 eV Core-core repulsion = 24651.672237 eV Total energy + Delta-G solvation = -4320.630753 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.069 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.61460 -41.52193 -40.26375 -38.95310 -37.72125 -37.56255 -37.43270 -34.86302 -33.65690 -31.99018 -31.91132 -31.01900 -27.51676 -27.20505 -26.69924 -25.87299 -24.09798 -23.36208 -22.66780 -21.57591 -20.56017 -20.10921 -18.90634 -18.53964 -18.05732 -17.28729 -16.98371 -16.91613 -16.59850 -16.20854 -16.03519 -15.59667 -15.52409 -15.28523 -15.12549 -14.93274 -14.78443 -14.57763 -14.41769 -14.35918 -13.74795 -13.69225 -13.57412 -13.44060 -13.24690 -13.02023 -12.94031 -12.88591 -12.40993 -12.26588 -12.21142 -12.03239 -12.01101 -11.80859 -11.56762 -11.26057 -11.14173 -10.68690 -10.16914 -9.96731 -9.75346 -9.59082 -9.10206 -4.90255 -0.10636 0.07031 0.36832 0.80976 1.18388 1.21031 1.53476 1.71601 1.76729 2.03761 2.31366 2.34208 2.37883 3.33714 3.42577 3.57016 3.58668 3.63719 3.66451 3.76233 3.93236 3.97550 4.07627 4.13283 4.27226 4.28798 4.31036 4.35707 4.43596 4.53966 4.60974 4.70818 4.75326 4.79133 4.85086 4.89266 4.99433 5.03814 5.05844 5.06327 5.14200 5.18524 5.40595 5.57388 5.63353 5.74039 5.99096 6.12744 6.48641 6.59733 7.14174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.402 5.402 3 C -0.080 4.080 4 C 0.590 3.410 5 O -0.586 6.586 6 N -0.686 5.686 7 C 0.116 3.884 8 H 0.085 0.915 9 C -0.126 4.126 10 C -0.062 4.062 11 H 0.129 0.871 12 C -0.051 4.051 13 C -0.102 4.102 14 C -0.045 4.045 15 Cl -0.063 7.063 16 C -0.053 4.053 17 Cl -0.064 7.064 18 C -0.100 4.100 19 C -0.092 4.092 20 C -0.143 4.143 21 C -0.122 4.122 22 C -0.214 4.214 23 C 0.014 3.986 24 C -0.059 4.059 25 O -0.555 6.555 26 Si 0.810 3.190 27 H 0.086 0.914 28 H 0.094 0.906 29 H 0.081 0.919 30 H 0.418 0.582 31 H 0.093 0.907 32 H 0.099 0.901 33 H 0.150 0.850 34 H 0.157 0.843 35 H 0.169 0.831 36 H 0.095 0.905 37 H 0.074 0.926 38 H 0.176 0.824 39 H 0.162 0.838 40 H 0.112 0.888 41 H 0.394 0.606 42 H -0.273 1.273 43 H -0.297 1.297 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.956 -3.769 -1.851 7.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.075 5.075 3 C -0.193 4.193 4 C 0.379 3.621 5 O -0.468 6.468 6 N -0.337 5.337 7 C 0.011 3.989 8 H 0.103 0.897 9 C -0.164 4.164 10 C -0.080 4.080 11 H 0.147 0.853 12 C -0.052 4.052 13 C -0.121 4.121 14 C -0.072 4.072 15 Cl -0.034 7.034 16 C -0.081 4.081 17 Cl -0.035 7.035 18 C -0.118 4.118 19 C -0.110 4.110 20 C -0.182 4.182 21 C -0.148 4.148 22 C -0.237 4.237 23 C -0.104 4.104 24 C -0.168 4.168 25 O -0.363 6.363 26 Si 0.713 3.287 27 H 0.104 0.896 28 H 0.112 0.888 29 H 0.100 0.900 30 H 0.257 0.743 31 H 0.112 0.888 32 H 0.117 0.883 33 H 0.167 0.833 34 H 0.175 0.825 35 H 0.187 0.813 36 H 0.113 0.887 37 H 0.092 0.908 38 H 0.194 0.806 39 H 0.179 0.821 40 H 0.129 0.871 41 H 0.244 0.756 42 H -0.198 1.198 43 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges 4.982 -4.156 -1.216 6.600 hybrid contribution -0.411 0.850 0.557 1.096 sum 4.570 -3.305 -0.659 5.679 Atomic orbital electron populations 1.22295 0.75662 1.04633 1.04502 1.43895 1.07165 1.04476 1.52001 1.20154 0.91367 0.87202 1.20590 1.17183 0.85283 0.84297 0.75293 1.90781 1.18129 1.85300 1.52576 1.45127 1.10076 1.04882 1.73605 1.21850 0.99345 0.80142 0.97584 0.89683 1.23402 0.97673 0.99020 0.96297 1.21682 0.97772 0.92665 0.95866 0.85319 1.19921 0.92901 0.95330 0.97040 1.21064 1.01680 0.89818 0.99492 1.20952 0.89249 0.91818 1.05220 1.98404 1.56155 1.52046 1.96838 1.21055 0.93616 0.88861 1.04547 1.98402 1.92695 1.24895 1.87503 1.21354 0.99661 0.91793 0.99032 1.21508 0.96497 0.96590 0.96380 1.23579 0.96659 1.01056 0.96905 1.21670 0.94473 0.95426 1.03201 1.20916 0.95254 0.95908 1.11659 1.21417 0.91244 0.89403 1.08380 1.25200 0.94745 0.94275 1.02540 1.86470 1.30109 1.89139 1.30540 0.92981 0.73591 0.74053 0.88080 0.89597 0.88768 0.90043 0.74336 0.88803 0.88260 0.83277 0.82494 0.81333 0.88702 0.90758 0.80623 0.82101 0.87072 0.75587 1.19844 1.22442 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.17 9.40 127.77 1.20 1.37 16 2 N -0.40 -1.19 3.16 -519.70 -1.64 -2.83 16 3 C -0.08 -0.20 6.89 40.35 0.28 0.08 16 4 C 0.59 2.37 7.77 86.45 0.67 3.04 16 5 O -0.59 -6.88 14.19 -4.33 -0.06 -6.94 16 6 N -0.69 2.61 5.25 -444.01 -2.33 0.28 16 7 C 0.12 -0.46 4.36 45.52 0.20 -0.26 16 8 H 0.08 0.12 7.42 -2.39 -0.02 0.10 16 9 C -0.13 1.05 7.29 31.12 0.23 1.28 16 10 C -0.06 0.58 3.86 -11.01 -0.04 0.54 16 11 H 0.13 -1.75 8.09 -2.39 -0.02 -1.77 16 12 C -0.05 0.30 5.29 -19.86 -0.11 0.19 16 13 C -0.10 0.22 8.39 22.29 0.19 0.41 16 14 C -0.04 -0.09 6.32 22.34 0.14 0.05 16 15 Cl -0.06 -0.28 27.96 -2.72 -0.08 -0.35 16 16 C -0.05 -0.09 6.32 22.35 0.14 0.05 16 17 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 18 C -0.10 0.31 9.83 22.29 0.22 0.53 16 19 C -0.09 0.62 9.71 22.27 0.22 0.84 16 20 C -0.14 0.82 7.25 31.12 0.23 1.05 16 21 C -0.12 0.32 10.36 22.57 0.23 0.55 16 22 C -0.21 0.39 9.37 22.01 0.21 0.59 16 23 C 0.01 0.00 6.14 41.34 0.25 0.25 16 24 C -0.06 0.14 2.89 71.23 0.21 0.34 16 25 O -0.56 1.25 10.43 -148.98 -1.55 -0.30 16 26 Si 0.81 -4.10 31.29 68.60 2.15 -1.96 16 27 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 28 H 0.09 0.16 6.94 -2.39 -0.02 0.14 16 29 H 0.08 0.56 6.10 -2.38 -0.01 0.54 16 30 H 0.42 -4.23 7.60 -92.70 -0.70 -4.93 16 31 H 0.09 -0.96 8.14 -2.38 -0.02 -0.98 16 32 H 0.10 -0.75 7.72 -2.38 -0.02 -0.77 16 33 H 0.15 -0.61 6.66 -2.91 -0.02 -0.63 16 34 H 0.16 -1.01 8.06 -2.91 -0.02 -1.03 16 35 H 0.17 -2.17 8.05 -2.91 -0.02 -2.19 16 36 H 0.09 -0.49 6.31 -2.39 -0.02 -0.51 16 37 H 0.07 -0.32 8.14 -2.38 -0.02 -0.34 16 38 H 0.18 -1.74 7.45 -2.91 -0.02 -1.76 16 39 H 0.16 -0.80 6.62 -2.91 -0.02 -0.82 16 40 H 0.11 -0.13 7.96 -2.39 -0.02 -0.14 16 41 H 0.39 -3.59 8.70 -74.05 -0.64 -4.24 16 42 H -0.27 0.45 6.76 99.48 0.67 1.12 16 43 H -0.30 -0.66 7.11 99.48 0.71 0.04 16 Total: 0.00 -20.31 383.65 0.61 -19.70 By element: Atomic # 1 Polarization: -17.92 SS G_CDS: -0.26 Total: -18.18 kcal Atomic # 6 Polarization: 6.45 SS G_CDS: 4.46 Total: 10.91 kcal Atomic # 7 Polarization: 1.42 SS G_CDS: -3.97 Total: -2.56 kcal Atomic # 8 Polarization: -5.63 SS G_CDS: -1.62 Total: -7.24 kcal Atomic # 14 Polarization: -4.10 SS G_CDS: 2.15 Total: -1.96 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -0.15 Total: -0.68 kcal Total: -20.31 0.61 -19.70 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.890 kcal (2) G-P(sol) polarization free energy of solvation -20.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.576 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.610 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.704 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds