Wall clock time and date at job start Mon Mar 8 2021 04:34:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35658 * 116.99643 * 2 1 4 4 C 1.38406 * 120.12519 * 0.27599 * 3 2 1 5 5 C 1.38726 * 120.03506 * 180.25267 * 4 3 2 6 6 O 1.35715 * 119.85859 * 179.76173 * 5 4 3 7 7 C 1.42890 * 117.00477 * 359.97438 * 6 5 4 8 8 C 1.39141 * 120.27220 * 359.75121 * 5 4 3 9 9 C 1.50703 * 119.87683 * 179.97438 * 8 5 4 10 10 O 1.42893 * 109.46804 * 284.97055 * 9 8 5 11 11 Si 1.86305 * 109.46848 * 164.97382 * 9 8 5 12 12 C 1.37580 * 120.24135 * 359.96968 * 8 5 4 13 13 C 1.39818 * 119.96525 * 0.02858 * 12 8 5 14 14 C 1.47305 * 120.13496 * 179.97438 * 13 12 8 15 15 O 1.21624 * 120.00079 * 179.97438 * 14 13 12 16 16 N 1.34770 * 119.99965 * 359.97438 * 14 13 12 17 17 C 1.46510 * 119.99953 * 180.02562 * 16 14 13 18 18 H 1.08992 * 112.84910 * 23.80001 * 17 16 14 19 19 C 1.53777 * 113.61489 * 155.00201 * 17 16 14 20 20 C 1.53774 * 87.08420 * 89.11218 * 19 17 16 21 21 H 1.08999 * 113.61796 * 270.79965 * 20 19 17 22 22 C 1.50704 * 113.61654 * 139.98170 * 20 19 17 23 23 C 1.38202 * 119.97622 * 299.97713 * 22 20 19 24 24 C 1.38352 * 119.99857 * 180.02562 * 23 22 20 25 25 Cl 1.73602 * 120.01660 * 179.97438 * 24 23 22 26 26 C 1.38440 * 119.96059 * 0.02562 * 24 23 22 27 27 Cl 1.73598 * 120.01967 * 180.02562 * 26 24 23 28 28 C 1.38351 * 119.96172 * 359.97438 * 26 24 23 29 29 C 1.38205 * 119.99812 * 0.02562 * 28 26 24 30 30 C 1.53778 * 113.60921 * 252.49577 * 17 16 14 31 31 H 1.09000 * 109.47435 * 300.00012 * 1 2 3 32 32 H 1.08999 * 109.47479 * 60.00461 * 1 2 3 33 33 H 1.09008 * 109.46760 * 180.02562 * 1 2 3 34 34 H 1.08002 * 119.97623 * 0.02562 * 4 3 2 35 35 H 1.09005 * 109.47393 * 299.99537 * 7 6 5 36 36 H 1.09001 * 109.47562 * 59.99546 * 7 6 5 37 37 H 1.09000 * 109.47357 * 179.97438 * 7 6 5 38 38 H 1.08994 * 109.47547 * 44.97215 * 9 8 5 39 39 H 0.96701 * 114.00538 * 60.00248 * 10 9 8 40 40 H 1.48498 * 109.99712 * 178.68047 * 11 9 8 41 41 H 1.48495 * 109.99962 * 299.99612 * 11 9 8 42 42 H 1.08001 * 120.01818 * 180.02562 * 12 8 5 43 43 H 0.97001 * 120.00433 * 359.97438 * 16 14 13 44 44 H 1.09005 * 113.61682 * 334.55990 * 19 17 16 45 45 H 1.09000 * 113.68842 * 203.67703 * 19 17 16 46 46 H 1.07997 * 120.00532 * 0.02562 * 23 22 20 47 47 H 1.08000 * 119.99499 * 180.27920 * 28 26 24 48 48 H 1.08002 * 119.97410 * 180.02562 * 29 28 26 49 49 H 1.09008 * 113.61212 * 156.33476 * 30 17 16 50 50 H 1.08995 * 113.61911 * 25.43213 * 30 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0447 1.2088 0.0000 4 6 1.2934 2.3711 0.0058 5 6 1.9250 3.6062 0.0005 6 8 1.1848 4.7437 0.0012 7 6 -0.2361 4.5931 0.0071 8 6 3.3143 3.6836 -0.0054 9 6 3.9912 5.0300 -0.0118 10 8 3.8888 5.6084 -1.3144 11 14 5.7876 4.8240 0.4368 12 6 4.0722 2.5354 -0.0054 13 6 3.4460 1.2853 -0.0001 14 6 4.2539 0.0535 -0.0006 15 8 3.7066 -1.0327 0.0045 16 7 5.5994 0.1301 -0.0068 17 6 6.4028 -1.0950 -0.0079 18 1 5.8647 -1.9537 -0.4091 19 6 7.8058 -0.9111 -0.6100 20 6 8.2786 -0.5388 0.8051 21 1 8.1950 0.5250 1.0277 22 6 9.6289 -1.1063 1.1594 23 6 9.8247 -2.4744 1.1590 24 6 11.0640 -2.9960 1.4846 25 17 11.3102 -4.7145 1.4849 26 6 12.1074 -2.1467 1.8113 27 17 13.6633 -2.7995 2.2195 28 6 11.9096 -0.7774 1.8112 29 6 10.6709 -0.2582 1.4856 30 6 7.1010 -1.3749 1.3334 31 1 -0.3634 0.5138 0.8900 32 1 -0.3634 0.5137 -0.8900 33 1 -0.3633 -1.0278 0.0005 34 1 0.2148 2.3164 0.0107 35 1 -0.5468 4.0422 -0.8807 36 1 -0.5399 4.0454 0.8992 37 1 -0.7058 5.5767 0.0076 38 1 3.5079 5.6831 0.7148 39 1 2.9795 5.7448 -1.6139 40 1 6.4737 6.1406 0.4031 41 1 5.9077 4.2233 1.7895 42 1 5.1503 2.5996 -0.0096 43 1 6.0359 0.9963 -0.0113 44 1 7.8708 -0.0887 -1.3226 45 1 8.2446 -1.8344 -0.9882 46 1 9.0102 -3.1364 0.9044 47 1 12.7244 -0.1142 2.0615 48 1 10.5171 0.8108 1.4852 49 1 7.3460 -2.4259 1.4871 50 1 6.5970 -0.9271 2.1898 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:34:28 Heat of formation + Delta-G solvation = -64.064321 kcal Electronic energy + Delta-G solvation = -37664.077322 eV Core-core repulsion = 32483.700704 eV Total energy + Delta-G solvation = -5180.376618 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.088 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -42.16228 -41.45463 -40.46636 -39.94665 -38.91031 -38.35409 -37.53356 -37.39661 -36.98355 -34.52084 -32.25130 -32.10459 -31.88711 -31.15532 -28.99934 -28.22007 -26.61642 -26.34723 -26.04819 -24.68175 -23.95710 -23.07807 -22.47657 -21.61880 -20.27640 -19.89874 -18.85405 -18.52981 -18.38582 -17.73189 -17.32517 -17.20647 -17.04611 -16.72296 -16.60458 -16.47493 -16.25845 -15.90913 -15.77887 -15.53954 -15.47072 -15.37435 -15.13218 -14.87204 -14.52342 -14.27013 -14.17569 -14.07200 -13.71192 -13.57852 -13.47812 -13.36516 -13.31154 -12.91341 -12.84734 -12.68105 -12.55956 -12.52425 -12.34473 -12.21740 -12.14076 -11.99321 -11.76622 -11.66333 -11.49165 -11.33991 -11.23828 -11.16440 -10.85405 -10.07201 -9.93983 -9.90236 -9.54856 -9.19454 -4.92396 -0.27861 -0.06512 0.08182 0.11057 0.84032 1.24208 1.39905 1.63740 1.75965 2.02933 2.05475 2.10720 2.17776 2.41663 2.61133 3.44486 3.49610 3.53087 3.62688 3.69421 3.70342 3.73464 3.79169 3.95371 4.00725 4.09156 4.12885 4.17062 4.18617 4.22688 4.26092 4.26929 4.28772 4.33064 4.33743 4.36703 4.62883 4.66350 4.69308 4.75544 4.79464 4.85895 4.86712 4.94566 4.97356 5.02091 5.06608 5.10043 5.13491 5.25152 5.28403 5.47252 5.64614 5.71586 5.97802 6.26439 6.59166 6.62388 7.30012 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.303 6.303 3 C 0.214 3.786 4 C -0.308 4.308 5 C 0.204 3.796 6 O -0.318 6.318 7 C 0.013 3.987 8 C -0.199 4.199 9 C -0.079 4.079 10 O -0.547 6.547 11 Si 0.806 3.194 12 C 0.010 3.990 13 C -0.224 4.224 14 C 0.566 3.434 15 O -0.563 6.563 16 N -0.699 5.699 17 C 0.116 3.884 18 H 0.084 0.916 19 C -0.125 4.125 20 C -0.066 4.066 21 H 0.132 0.868 22 C -0.050 4.050 23 C -0.102 4.102 24 C -0.045 4.045 25 Cl -0.065 7.065 26 C -0.054 4.054 27 Cl -0.065 7.065 28 C -0.100 4.100 29 C -0.092 4.092 30 C -0.147 4.147 31 H 0.070 0.930 32 H 0.072 0.928 33 H 0.112 0.888 34 H 0.163 0.837 35 H 0.071 0.929 36 H 0.067 0.933 37 H 0.122 0.878 38 H 0.069 0.931 39 H 0.373 0.627 40 H -0.295 1.295 41 H -0.250 1.250 42 H 0.168 0.832 43 H 0.414 0.586 44 H 0.100 0.900 45 H 0.098 0.902 46 H 0.149 0.851 47 H 0.157 0.843 48 H 0.171 0.829 49 H 0.093 0.907 50 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.913 6.272 -1.200 7.489 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.214 6.214 3 C 0.165 3.835 4 C -0.327 4.327 5 C 0.156 3.844 6 O -0.230 6.230 7 C -0.081 4.081 8 C -0.201 4.201 9 C -0.186 4.186 10 O -0.353 6.353 11 Si 0.706 3.294 12 C -0.008 4.008 13 C -0.228 4.228 14 C 0.355 3.645 15 O -0.443 6.443 16 N -0.352 5.352 17 C 0.011 3.989 18 H 0.102 0.898 19 C -0.163 4.163 20 C -0.084 4.084 21 H 0.150 0.850 22 C -0.050 4.050 23 C -0.121 4.121 24 C -0.073 4.073 25 Cl -0.036 7.036 26 C -0.081 4.081 27 Cl -0.036 7.036 28 C -0.119 4.119 29 C -0.110 4.110 30 C -0.186 4.186 31 H 0.089 0.911 32 H 0.090 0.910 33 H 0.131 0.869 34 H 0.181 0.819 35 H 0.089 0.911 36 H 0.085 0.915 37 H 0.141 0.859 38 H 0.086 0.914 39 H 0.222 0.778 40 H -0.223 1.223 41 H -0.175 1.175 42 H 0.185 0.815 43 H 0.252 0.748 44 H 0.119 0.881 45 H 0.117 0.883 46 H 0.167 0.833 47 H 0.175 0.825 48 H 0.189 0.811 49 H 0.111 0.889 50 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -2.771 5.460 -0.573 6.150 hybrid contribution -1.933 0.325 0.525 2.029 sum -4.704 5.786 -0.048 7.457 Atomic orbital electron populations 1.23467 0.76576 1.05758 1.02597 1.86369 1.23144 1.25881 1.86038 1.19007 0.91193 0.84732 0.88558 1.21413 1.02020 0.90784 1.18526 1.18914 0.90732 0.85120 0.89632 1.86032 1.21387 1.28676 1.86941 1.23477 0.75872 1.06047 1.02688 1.19576 0.90714 0.97010 1.12756 1.25551 1.14691 0.90273 0.88042 1.86680 1.32917 1.83710 1.31994 0.92664 0.72659 0.83184 0.80850 1.20867 0.99883 0.88712 0.91330 1.19184 0.90820 0.93902 1.18890 1.17992 0.82618 0.88185 0.75674 1.90828 1.72389 1.30268 1.50796 1.45413 1.04740 1.09968 1.75081 1.21823 0.91681 0.87852 0.97576 0.89804 1.23408 0.92505 1.04285 0.96097 1.21744 0.88510 1.01369 0.96766 0.84980 1.19930 0.96413 0.91791 0.96905 1.21070 0.94718 0.96378 0.99903 1.20952 0.95350 0.85097 1.05870 1.98402 1.97045 1.11129 1.96987 1.21051 0.86987 0.94328 1.05775 1.98399 1.26628 1.86564 1.92032 1.21353 0.99740 0.91635 0.99157 1.21529 0.90668 1.02119 0.96637 1.23593 0.96087 1.01276 0.97608 0.91124 0.90988 0.86938 0.81928 0.91059 0.91481 0.85938 0.91378 0.77839 1.22295 1.17479 0.81495 0.74772 0.88112 0.88308 0.83334 0.82540 0.81124 0.88896 0.91068 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.30 -2.19 8.56 -68.77 -0.59 -2.78 16 3 C 0.21 1.02 6.70 22.82 0.15 1.17 16 4 C -0.31 -0.01 8.01 22.43 0.18 0.16 16 5 C 0.20 0.04 6.62 22.60 0.15 0.19 16 6 O -0.32 0.57 9.36 -90.37 -0.85 -0.28 16 7 C 0.01 -0.11 9.80 113.37 1.11 1.01 16 8 C -0.20 0.05 5.27 -19.80 -0.10 -0.05 16 9 C -0.08 0.05 2.32 71.24 0.17 0.22 16 10 O -0.55 -0.56 12.65 -148.98 -1.89 -2.45 16 11 Si 0.81 -3.35 30.16 68.60 2.07 -1.28 16 12 C 0.01 -0.02 8.14 22.50 0.18 0.16 16 13 C -0.22 -0.77 5.89 -20.00 -0.12 -0.89 16 14 C 0.57 3.25 7.76 86.63 0.67 3.92 16 15 O -0.56 -8.32 14.75 16.85 0.25 -8.08 16 16 N -0.70 1.92 5.21 -443.42 -2.31 -0.39 16 17 C 0.12 -0.35 4.32 45.51 0.20 -0.15 16 18 H 0.08 0.21 7.46 -2.39 -0.02 0.19 16 19 C -0.13 1.04 7.29 31.12 0.23 1.27 16 20 C -0.07 0.58 3.86 -11.02 -0.04 0.54 16 21 H 0.13 -1.81 8.09 -2.39 -0.02 -1.83 16 22 C -0.05 0.27 5.29 -19.87 -0.11 0.16 16 23 C -0.10 0.16 8.39 22.29 0.19 0.35 16 24 C -0.05 -0.12 6.32 22.35 0.14 0.03 16 25 Cl -0.06 -0.32 27.96 -2.72 -0.08 -0.39 16 26 C -0.05 -0.12 6.32 22.34 0.14 0.02 16 27 Cl -0.07 -0.29 27.96 -2.72 -0.08 -0.37 16 28 C -0.10 0.28 9.83 22.29 0.22 0.49 16 29 C -0.09 0.60 9.71 22.27 0.22 0.81 16 30 C -0.15 0.65 7.25 31.12 0.23 0.88 16 31 H 0.07 -0.38 7.65 -2.39 -0.02 -0.40 16 32 H 0.07 -0.40 7.67 -2.39 -0.02 -0.41 16 33 H 0.11 -0.43 8.14 -2.38 -0.02 -0.45 16 34 H 0.16 -0.80 4.50 -2.91 -0.01 -0.82 16 35 H 0.07 -0.71 7.65 -2.38 -0.02 -0.72 16 36 H 0.07 -0.62 7.65 -2.39 -0.02 -0.64 16 37 H 0.12 -1.37 8.14 -2.39 -0.02 -1.39 16 38 H 0.07 0.02 7.82 -2.39 -0.02 0.00 16 39 H 0.37 -0.91 8.59 -74.06 -0.64 -1.54 16 40 H -0.30 -0.97 7.11 99.48 0.71 -0.26 16 41 H -0.25 0.83 7.11 99.48 0.71 1.54 16 42 H 0.17 -1.56 3.43 -2.91 -0.01 -1.57 16 43 H 0.41 -4.12 6.72 -92.71 -0.62 -4.74 16 44 H 0.10 -1.13 8.14 -2.38 -0.02 -1.15 16 45 H 0.10 -0.74 7.72 -2.39 -0.02 -0.76 16 46 H 0.15 -0.50 6.66 -2.91 -0.02 -0.51 16 47 H 0.16 -0.94 8.06 -2.91 -0.02 -0.97 16 48 H 0.17 -2.21 8.05 -2.91 -0.02 -2.23 16 49 H 0.09 -0.35 6.31 -2.38 -0.02 -0.37 16 50 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 Total: 0.00 -25.16 436.33 1.27 -23.89 By element: Atomic # 1 Polarization: -19.07 SS G_CDS: -0.17 Total: -19.24 kcal Atomic # 6 Polarization: 6.46 SS G_CDS: 4.91 Total: 11.37 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -2.31 Total: -0.39 kcal Atomic # 8 Polarization: -10.51 SS G_CDS: -3.07 Total: -13.58 kcal Atomic # 14 Polarization: -3.35 SS G_CDS: 2.07 Total: -1.28 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -0.15 Total: -0.76 kcal Total: -25.16 1.27 -23.89 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.178 kcal (2) G-P(sol) polarization free energy of solvation -25.157 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.335 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.886 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds