Wall clock time and date at job start Mon Mar 8 2021 04:34:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86297 * 109.46982 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00026 * 2 1 3 5 5 C 1.37846 * 119.89269 * 64.99997 * 4 2 1 6 6 C 1.39661 * 119.88514 * 180.02562 * 5 4 2 7 7 C 1.47686 * 120.17182 * 179.97438 * 6 5 4 8 8 O 1.21576 * 120.00014 * 180.02562 * 7 6 5 9 9 N 1.34776 * 119.99874 * 0.02562 * 7 6 5 10 10 C 1.46503 * 119.99784 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.90845 * 23.74937 * 10 9 7 12 12 C 1.53787 * 113.61181 * 154.99519 * 10 9 7 13 13 C 1.53784 * 87.07923 * 89.11654 * 12 10 9 14 14 H 1.09000 * 113.61578 * 270.88484 * 13 12 10 15 15 C 1.50701 * 113.61605 * 139.97671 * 13 12 10 16 16 C 1.38217 * 119.98286 * 299.72960 * 15 13 12 17 17 C 1.38242 * 120.03946 * 179.76410 * 16 15 13 18 18 C 1.38307 * 119.99916 * 0.50668 * 17 16 15 19 19 Cl 1.73603 * 120.02011 * 179.76731 * 18 17 16 20 20 C 1.38491 * 119.96183 * 359.74269 * 18 17 16 21 21 Cl 1.73594 * 120.01929 * 180.02562 * 20 18 17 22 22 C 1.38247 * 119.97876 * 119.99484 * 15 13 12 23 23 C 1.53778 * 113.61472 * 252.49040 * 10 9 7 24 24 C 1.39829 * 119.65905 * 0.25031 * 6 5 4 25 25 F 1.35099 * 120.10773 * 179.72835 * 24 6 5 26 26 C 1.38324 * 119.78268 * 359.47469 * 24 6 5 27 27 C 1.38203 * 120.11036 * 0.52703 * 26 24 6 28 28 H 0.96706 * 114.00399 * 299.99786 * 1 2 3 29 29 H 1.08999 * 109.47091 * 240.00085 * 2 1 3 30 30 H 1.48506 * 110.00082 * 299.99863 * 3 2 1 31 31 H 1.48502 * 110.00275 * 61.31878 * 3 2 1 32 32 H 1.08011 * 120.06130 * 0.02562 * 5 4 2 33 33 H 0.96997 * 120.00437 * 359.97438 * 9 7 6 34 34 H 1.09004 * 113.61202 * 203.66406 * 12 10 9 35 35 H 1.08994 * 113.61447 * 334.56838 * 12 10 9 36 36 H 1.08002 * 119.98289 * 0.02562 * 16 15 13 37 37 H 1.08004 * 120.00590 * 180.24942 * 17 16 15 38 38 H 1.08002 * 119.99867 * 359.96387 * 22 15 13 39 39 H 1.08999 * 113.61111 * 25.43782 * 23 10 9 40 40 H 1.08999 * 113.61280 * 156.25165 * 23 10 9 41 41 H 1.07990 * 119.94109 * 180.27286 * 26 24 6 42 42 H 1.08010 * 119.82547 * 179.71986 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6842 -2.0564 1.3956 6 6 2.1494 -2.7145 2.5362 7 6 1.8877 -4.1564 2.7199 8 8 2.2938 -4.7260 3.7143 9 7 1.1988 -4.8406 1.7852 10 6 0.9388 -6.2708 1.9678 11 1 0.9661 -6.5770 3.0135 12 6 -0.3025 -6.7726 1.2112 13 6 0.6300 -7.0401 0.0179 14 1 0.7391 -6.1863 -0.6509 15 6 0.3232 -8.3221 -0.7125 16 6 0.3902 -9.5305 -0.0449 17 6 0.1043 -10.7067 -0.7125 18 6 -0.2388 -10.6758 -2.0520 19 17 -0.5920 -12.1531 -2.8925 20 6 -0.3009 -9.4655 -2.7223 21 17 -0.7320 -9.4248 -4.4033 22 6 -0.0197 -8.2892 -2.0514 23 6 1.7713 -7.1716 1.0402 24 6 2.8592 -2.0000 3.5062 25 9 3.3086 -2.6263 4.6157 26 6 3.1042 -0.6509 3.3236 27 6 2.6396 -0.0089 2.1913 28 1 -0.3934 0.4417 0.7651 29 1 1.7922 -0.5138 -0.8900 30 1 1.5613 2.4679 -1.2086 31 1 1.5877 2.4586 1.2242 32 1 1.1317 -2.6013 0.6443 33 1 0.8746 -4.3861 0.9921 34 1 -0.7372 -7.6771 1.6369 35 1 -1.0422 -5.9950 1.0215 36 1 0.6620 -9.5554 1.0001 37 1 0.1529 -11.6503 -0.1893 38 1 -0.0682 -7.3450 -2.5733 39 1 2.7056 -6.7159 0.7125 40 1 1.9047 -8.1846 1.4198 41 1 3.6560 -0.0976 4.0690 42 1 2.8297 1.0456 2.0556 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:34:37 Heat of formation + Delta-G solvation = -39.665148 kcal Electronic energy + Delta-G solvation = -30679.372781 eV Core-core repulsion = 25979.039837 eV Total energy + Delta-G solvation = -4700.332944 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.048 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -49.90608 -41.90797 -41.05082 -40.12110 -39.05191 -37.73674 -37.53681 -37.42189 -34.79706 -32.85981 -32.45568 -32.17753 -31.39555 -26.94102 -26.83560 -26.68992 -25.40369 -24.20597 -23.52024 -22.66904 -21.74739 -20.41539 -19.33535 -18.72968 -18.46041 -18.30621 -17.46356 -17.29673 -16.93192 -16.87282 -16.64079 -16.37421 -16.14436 -15.99098 -15.77708 -15.60294 -15.30603 -15.19443 -14.96806 -14.78878 -14.45592 -14.39769 -13.90813 -13.78448 -13.69290 -13.52216 -13.27718 -13.04166 -12.93010 -12.88742 -12.49432 -12.44625 -12.42915 -11.94693 -11.92041 -11.86425 -11.73129 -11.45039 -11.16297 -10.77539 -10.48254 -10.20754 -10.07418 -9.92496 -9.66068 -5.13336 -0.57911 -0.20219 -0.16640 -0.04025 0.81177 1.06947 1.17918 1.41094 1.57894 1.80324 1.85011 2.24505 2.40267 2.95493 3.11196 3.20472 3.30142 3.33563 3.37853 3.44306 3.49855 3.53973 3.70012 3.79000 3.82205 3.91764 3.93529 4.06114 4.24065 4.25358 4.38497 4.43202 4.51907 4.52335 4.59874 4.62682 4.70847 4.73010 4.79766 4.80582 4.82164 4.92286 4.93382 4.97979 5.22995 5.41823 5.44303 5.47769 6.18133 6.27490 7.04517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.073 4.073 3 Si 0.685 3.315 4 C -0.138 4.138 5 C -0.030 4.030 6 C -0.176 4.176 7 C 0.563 3.437 8 O -0.517 6.517 9 N -0.709 5.709 10 C 0.120 3.880 11 H 0.110 0.890 12 C -0.135 4.135 13 C -0.075 4.075 14 H 0.102 0.898 15 C -0.054 4.054 16 C -0.101 4.101 17 C -0.094 4.094 18 C -0.036 4.036 19 Cl -0.047 7.047 20 C -0.028 4.028 21 Cl -0.047 7.047 22 C -0.096 4.096 23 C -0.143 4.143 24 C 0.168 3.832 25 F -0.110 7.110 26 C -0.156 4.156 27 C -0.061 4.061 28 H 0.378 0.622 29 H 0.123 0.877 30 H -0.254 1.254 31 H -0.257 1.257 32 H 0.138 0.862 33 H 0.401 0.599 34 H 0.102 0.898 35 H 0.080 0.920 36 H 0.140 0.860 37 H 0.144 0.856 38 H 0.142 0.858 39 H 0.078 0.922 40 H 0.098 0.902 41 H 0.150 0.850 42 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.069 4.239 -0.689 4.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.183 4.183 3 Si 0.586 3.414 4 C -0.139 4.139 5 C -0.049 4.049 6 C -0.180 4.180 7 C 0.350 3.650 8 O -0.392 6.392 9 N -0.361 5.361 10 C 0.015 3.985 11 H 0.128 0.872 12 C -0.173 4.173 13 C -0.094 4.094 14 H 0.121 0.879 15 C -0.054 4.054 16 C -0.119 4.119 17 C -0.113 4.113 18 C -0.064 4.064 19 Cl -0.018 7.018 20 C -0.056 4.056 21 Cl -0.017 7.017 22 C -0.115 4.115 23 C -0.182 4.182 24 C 0.148 3.852 25 F -0.088 7.088 26 C -0.175 4.175 27 C -0.079 4.079 28 H 0.226 0.774 29 H 0.141 0.859 30 H -0.179 1.179 31 H -0.182 1.182 32 H 0.156 0.844 33 H 0.237 0.763 34 H 0.120 0.880 35 H 0.099 0.901 36 H 0.158 0.842 37 H 0.162 0.838 38 H 0.160 0.840 39 H 0.097 0.903 40 H 0.117 0.883 41 H 0.168 0.832 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 1.179 4.182 -0.701 4.401 hybrid contribution -1.220 -0.254 -0.024 1.247 sum -0.041 3.928 -0.725 3.995 Atomic orbital electron populations 1.86618 1.17379 1.79953 1.49490 1.25013 0.84187 1.11179 0.97917 0.94952 0.91528 0.74213 0.80676 1.20262 1.01258 0.94507 0.97857 1.21018 0.95161 0.93808 0.94936 1.20039 1.06018 0.94487 0.97431 1.17960 0.78218 0.85861 0.83005 1.90881 1.50040 1.69889 1.28438 1.45528 1.57090 1.09557 1.23908 1.21862 0.95787 0.79796 1.01052 0.87231 1.23453 0.96281 1.02537 0.95014 1.21660 0.97586 0.94823 0.95307 0.87949 1.19724 0.97740 0.95117 0.92859 1.21108 0.99076 0.90979 1.00760 1.21085 0.98590 0.99970 0.91650 1.20857 1.04773 0.87141 0.93608 1.98415 1.93059 1.32716 1.77626 1.20816 1.03992 0.93539 0.87244 1.98415 1.91176 1.98783 1.13365 1.20954 0.99565 0.96890 0.94051 1.23593 0.97739 1.01102 0.95758 1.17761 0.93912 0.90449 0.83111 1.91635 1.85893 1.82321 1.48969 1.21178 1.03582 0.92602 1.00141 1.21162 0.94439 1.00144 0.92108 0.77405 0.85936 1.17851 1.18231 0.84401 0.76311 0.87994 0.90119 0.84191 0.83809 0.84041 0.90299 0.88325 0.83219 0.84024 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.90 12.83 -35.23 -0.45 0.45 16 2 C -0.07 0.24 2.80 36.01 0.10 0.34 16 3 Si 0.69 -2.30 29.87 -169.99 -5.08 -7.38 16 4 C -0.14 0.38 5.35 -104.68 -0.56 -0.18 16 5 C -0.03 0.07 9.17 -39.19 -0.36 -0.29 16 6 C -0.18 -0.07 5.88 -104.91 -0.62 -0.68 16 7 C 0.56 1.04 7.77 -12.40 -0.10 0.95 16 8 O -0.52 -3.11 14.94 5.30 0.08 -3.03 16 9 N -0.71 1.08 5.21 -54.01 -0.28 0.80 16 10 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 11 H 0.11 -0.01 7.47 -51.93 -0.39 -0.39 16 12 C -0.13 0.47 7.29 -25.91 -0.19 0.28 16 13 C -0.08 0.25 3.86 -90.96 -0.35 -0.10 16 14 H 0.10 -0.44 8.10 -51.93 -0.42 -0.86 16 15 C -0.05 0.10 5.29 -104.63 -0.55 -0.45 16 16 C -0.10 0.20 8.62 -39.59 -0.34 -0.14 16 17 C -0.09 0.07 9.83 -39.55 -0.39 -0.31 16 18 C -0.04 -0.03 6.32 -39.46 -0.25 -0.28 16 19 Cl -0.05 -0.08 27.96 -51.86 -1.45 -1.53 16 20 C -0.03 -0.03 6.32 -39.46 -0.25 -0.27 16 21 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 22 C -0.10 0.08 9.49 -39.55 -0.38 -0.30 16 23 C -0.14 0.37 7.25 -25.92 -0.19 0.18 16 24 C 0.17 0.21 7.29 -38.96 -0.28 -0.07 16 25 F -0.11 -0.45 15.55 2.25 0.04 -0.42 16 26 C -0.16 0.24 10.01 -39.56 -0.40 -0.16 16 27 C -0.06 0.18 8.66 -39.51 -0.34 -0.16 16 28 H 0.38 -1.61 8.70 45.56 0.40 -1.21 16 29 H 0.12 -0.51 7.96 -51.93 -0.41 -0.93 16 30 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 31 H -0.26 0.40 7.00 56.52 0.40 0.79 16 32 H 0.14 -0.59 6.41 -52.48 -0.34 -0.92 16 33 H 0.40 -1.63 6.73 -40.82 -0.27 -1.90 16 34 H 0.10 -0.38 7.73 -51.93 -0.40 -0.78 16 35 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.14 -0.54 6.64 -52.49 -0.35 -0.89 16 37 H 0.14 -0.33 8.06 -52.48 -0.42 -0.75 16 38 H 0.14 -0.33 8.06 -52.49 -0.42 -0.75 16 39 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.10 -0.31 6.30 -51.93 -0.33 -0.63 16 41 H 0.15 -0.50 8.06 -52.49 -0.42 -0.92 16 42 H 0.14 -0.69 4.82 -52.48 -0.25 -0.95 16 LS Contribution 385.26 15.07 5.81 5.81 Total: 0.00 -8.46 385.26 -12.60 -21.07 By element: Atomic # 1 Polarization: -7.99 SS G_CDS: -4.08 Total: -12.07 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: -5.73 Total: -2.18 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.28 Total: 0.80 kcal Atomic # 8 Polarization: -2.21 SS G_CDS: -0.37 Total: -2.58 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -2.30 SS G_CDS: -5.08 Total: -7.38 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -2.90 Total: -3.05 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -8.46 -12.60 -21.07 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.600 kcal (2) G-P(sol) polarization free energy of solvation -8.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.061 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.604 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.066 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds