Wall clock time and date at job start Mon Mar 8 2021 04:34:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86297 * 109.46982 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00026 * 2 1 3 5 5 C 1.37846 * 119.89269 * 64.99997 * 4 2 1 6 6 C 1.39661 * 119.88514 * 180.02562 * 5 4 2 7 7 C 1.47686 * 120.17182 * 179.97438 * 6 5 4 8 8 O 1.21576 * 120.00014 * 180.02562 * 7 6 5 9 9 N 1.34776 * 119.99874 * 0.02562 * 7 6 5 10 10 C 1.46503 * 119.99784 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.90845 * 23.74937 * 10 9 7 12 12 C 1.53787 * 113.61181 * 154.99519 * 10 9 7 13 13 C 1.53784 * 87.07923 * 89.11654 * 12 10 9 14 14 H 1.09000 * 113.61578 * 270.88484 * 13 12 10 15 15 C 1.50701 * 113.61605 * 139.97671 * 13 12 10 16 16 C 1.38217 * 119.98286 * 299.72960 * 15 13 12 17 17 C 1.38242 * 120.03946 * 179.76410 * 16 15 13 18 18 C 1.38307 * 119.99916 * 0.50668 * 17 16 15 19 19 Cl 1.73603 * 120.02011 * 179.76731 * 18 17 16 20 20 C 1.38491 * 119.96183 * 359.74269 * 18 17 16 21 21 Cl 1.73594 * 120.01929 * 180.02562 * 20 18 17 22 22 C 1.38247 * 119.97876 * 119.99484 * 15 13 12 23 23 C 1.53778 * 113.61472 * 252.49040 * 10 9 7 24 24 C 1.39829 * 119.65905 * 0.25031 * 6 5 4 25 25 F 1.35099 * 120.10773 * 179.72835 * 24 6 5 26 26 C 1.38324 * 119.78268 * 359.47469 * 24 6 5 27 27 C 1.38203 * 120.11036 * 0.52703 * 26 24 6 28 28 H 0.96706 * 114.00399 * 299.99786 * 1 2 3 29 29 H 1.08999 * 109.47091 * 240.00085 * 2 1 3 30 30 H 1.48506 * 110.00082 * 299.99863 * 3 2 1 31 31 H 1.48502 * 110.00275 * 61.31878 * 3 2 1 32 32 H 1.08011 * 120.06130 * 0.02562 * 5 4 2 33 33 H 0.96997 * 120.00437 * 359.97438 * 9 7 6 34 34 H 1.09004 * 113.61202 * 203.66406 * 12 10 9 35 35 H 1.08994 * 113.61447 * 334.56838 * 12 10 9 36 36 H 1.08002 * 119.98289 * 0.02562 * 16 15 13 37 37 H 1.08004 * 120.00590 * 180.24942 * 17 16 15 38 38 H 1.08002 * 119.99867 * 359.96387 * 22 15 13 39 39 H 1.08999 * 113.61111 * 25.43782 * 23 10 9 40 40 H 1.08999 * 113.61280 * 156.25165 * 23 10 9 41 41 H 1.07990 * 119.94109 * 180.27286 * 26 24 6 42 42 H 1.08010 * 119.82547 * 179.71986 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6842 -2.0564 1.3956 6 6 2.1494 -2.7145 2.5362 7 6 1.8877 -4.1564 2.7199 8 8 2.2938 -4.7260 3.7143 9 7 1.1988 -4.8406 1.7852 10 6 0.9388 -6.2708 1.9678 11 1 0.9661 -6.5770 3.0135 12 6 -0.3025 -6.7726 1.2112 13 6 0.6300 -7.0401 0.0179 14 1 0.7391 -6.1863 -0.6509 15 6 0.3232 -8.3221 -0.7125 16 6 0.3902 -9.5305 -0.0449 17 6 0.1043 -10.7067 -0.7125 18 6 -0.2388 -10.6758 -2.0520 19 17 -0.5920 -12.1531 -2.8925 20 6 -0.3009 -9.4655 -2.7223 21 17 -0.7320 -9.4248 -4.4033 22 6 -0.0197 -8.2892 -2.0514 23 6 1.7713 -7.1716 1.0402 24 6 2.8592 -2.0000 3.5062 25 9 3.3086 -2.6263 4.6157 26 6 3.1042 -0.6509 3.3236 27 6 2.6396 -0.0089 2.1913 28 1 -0.3934 0.4417 0.7651 29 1 1.7922 -0.5138 -0.8900 30 1 1.5613 2.4679 -1.2086 31 1 1.5877 2.4586 1.2242 32 1 1.1317 -2.6013 0.6443 33 1 0.8746 -4.3861 0.9921 34 1 -0.7372 -7.6771 1.6369 35 1 -1.0422 -5.9950 1.0215 36 1 0.6620 -9.5554 1.0001 37 1 0.1529 -11.6503 -0.1893 38 1 -0.0682 -7.3450 -2.5733 39 1 2.7056 -6.7159 0.7125 40 1 1.9047 -8.1846 1.4198 41 1 3.6560 -0.0976 4.0690 42 1 2.8297 1.0456 2.0556 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:34:35 Heat of formation + Delta-G solvation = -35.433955 kcal Electronic energy + Delta-G solvation = -30679.189302 eV Core-core repulsion = 25979.039837 eV Total energy + Delta-G solvation = -4700.149466 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.048 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -50.01086 -41.82076 -40.95310 -40.04008 -39.02602 -37.57673 -37.57332 -37.42787 -34.81088 -32.75135 -32.31623 -32.07422 -31.30362 -26.71993 -26.67810 -26.55183 -25.29644 -24.10245 -23.39930 -22.56937 -21.70591 -20.29290 -19.23420 -18.64718 -18.35187 -18.25521 -17.36084 -17.19616 -16.94741 -16.85266 -16.55144 -16.19736 -16.01981 -15.99139 -15.68255 -15.57084 -15.21839 -15.11033 -14.83271 -14.66748 -14.42790 -14.33613 -13.79562 -13.60113 -13.54989 -13.39147 -13.18325 -12.95612 -12.93909 -12.83238 -12.43353 -12.37369 -12.27767 -11.96218 -11.84656 -11.71366 -11.59817 -11.29209 -11.22810 -10.61776 -10.41109 -10.11637 -9.99682 -9.83831 -9.60870 -4.87438 -0.49723 -0.13864 -0.02446 0.05596 0.79495 1.19113 1.32040 1.59549 1.62889 1.91321 2.02255 2.34401 2.47315 3.05260 3.33779 3.39608 3.46621 3.52489 3.53718 3.62089 3.67589 3.68379 3.89983 3.98263 4.01021 4.08778 4.11022 4.18606 4.36639 4.46998 4.59922 4.62894 4.67875 4.75860 4.78193 4.79557 4.86258 4.88194 4.94771 4.95750 5.00936 5.07265 5.12061 5.14891 5.35119 5.56601 5.58231 5.60350 6.35436 6.51106 7.04922 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.073 4.073 3 Si 0.758 3.242 4 C -0.131 4.131 5 C -0.023 4.023 6 C -0.188 4.188 7 C 0.557 3.443 8 O -0.570 6.570 9 N -0.692 5.692 10 C 0.112 3.888 11 H 0.088 0.912 12 C -0.124 4.124 13 C -0.066 4.066 14 H 0.118 0.882 15 C -0.050 4.050 16 C -0.098 4.098 17 C -0.099 4.099 18 C -0.053 4.053 19 Cl -0.063 7.063 20 C -0.044 4.044 21 Cl -0.061 7.061 22 C -0.098 4.098 23 C -0.141 4.141 24 C 0.134 3.866 25 F -0.137 7.137 26 C -0.153 4.153 27 C -0.053 4.053 28 H 0.388 0.612 29 H 0.138 0.862 30 H -0.307 1.307 31 H -0.278 1.278 32 H 0.161 0.839 33 H 0.415 0.585 34 H 0.107 0.893 35 H 0.090 0.910 36 H 0.161 0.839 37 H 0.156 0.844 38 H 0.156 0.844 39 H 0.070 0.930 40 H 0.104 0.896 41 H 0.165 0.835 42 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.852 5.428 -1.308 5.648 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.182 4.182 3 Si 0.664 3.336 4 C -0.131 4.131 5 C -0.041 4.041 6 C -0.192 4.192 7 C 0.346 3.654 8 O -0.450 6.450 9 N -0.344 5.344 10 C 0.006 3.994 11 H 0.106 0.894 12 C -0.161 4.161 13 C -0.084 4.084 14 H 0.136 0.864 15 C -0.050 4.050 16 C -0.116 4.116 17 C -0.117 4.117 18 C -0.080 4.080 19 Cl -0.034 7.034 20 C -0.071 4.071 21 Cl -0.032 7.032 22 C -0.116 4.116 23 C -0.179 4.179 24 C 0.114 3.886 25 F -0.115 7.115 26 C -0.172 4.172 27 C -0.071 4.071 28 H 0.238 0.762 29 H 0.156 0.844 30 H -0.235 1.235 31 H -0.204 1.204 32 H 0.178 0.822 33 H 0.254 0.746 34 H 0.126 0.874 35 H 0.108 0.892 36 H 0.178 0.822 37 H 0.173 0.827 38 H 0.174 0.826 39 H 0.089 0.911 40 H 0.122 0.878 41 H 0.183 0.817 42 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 0.947 5.360 -1.346 5.607 hybrid contribution -1.181 -0.522 0.149 1.300 sum -0.234 4.837 -1.197 4.989 Atomic orbital electron populations 1.86600 1.18015 1.80226 1.50351 1.25125 0.83669 1.11247 0.98203 0.94143 0.90353 0.72465 0.76661 1.20375 1.00591 0.94250 0.97905 1.21208 0.94531 0.94128 0.94251 1.20045 1.06956 0.93817 0.98404 1.18289 0.77866 0.86576 0.82711 1.90848 1.52479 1.71005 1.30652 1.45424 1.55697 1.09690 1.23566 1.21921 0.97471 0.79680 1.00308 0.89393 1.23414 0.95659 1.02893 0.94174 1.21659 0.96889 0.94641 0.95177 0.86368 1.19886 0.96911 0.95742 0.92503 1.21385 0.98027 0.90542 1.01660 1.21298 0.98287 1.01061 0.91094 1.21042 1.06039 0.86657 0.94310 1.98402 1.93282 1.33651 1.78063 1.20979 1.05163 0.94213 0.86784 1.98404 1.91407 1.98819 1.14531 1.21165 0.99101 0.96902 0.94473 1.23587 0.97547 1.01111 0.95691 1.18221 0.95617 0.91725 0.83084 1.91561 1.86543 1.82998 1.50413 1.21371 1.03337 0.91521 1.00948 1.21416 0.93384 1.01066 0.91216 0.76244 0.84399 1.23503 1.20436 0.82178 0.74609 0.87442 0.89191 0.82198 0.82671 0.82596 0.91080 0.87762 0.81747 0.81836 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.90 12.83 -148.98 -1.91 0.99 16 2 C -0.07 0.63 2.80 71.24 0.20 0.83 16 3 Si 0.76 -6.06 29.87 68.60 2.05 -4.02 16 4 C -0.13 0.96 5.35 -19.90 -0.11 0.86 16 5 C -0.02 0.13 9.17 22.52 0.21 0.34 16 6 C -0.19 -0.22 5.88 -20.05 -0.12 -0.33 16 7 C 0.56 2.67 7.77 86.74 0.67 3.34 16 8 O -0.57 -8.28 14.94 -3.95 -0.06 -8.34 16 9 N -0.69 2.30 5.21 -443.05 -2.31 -0.01 16 10 C 0.11 -0.42 4.32 45.52 0.20 -0.23 16 11 H 0.09 0.10 7.47 -2.39 -0.02 0.09 16 12 C -0.12 1.04 7.29 31.12 0.23 1.27 16 13 C -0.07 0.56 3.86 -11.01 -0.04 0.52 16 14 H 0.12 -1.34 8.10 -2.39 -0.02 -1.35 16 15 C -0.05 0.26 5.29 -19.87 -0.11 0.15 16 16 C -0.10 0.50 8.62 22.27 0.19 0.69 16 17 C -0.10 0.20 9.83 22.29 0.22 0.42 16 18 C -0.05 -0.11 6.32 22.35 0.14 0.03 16 19 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 20 C -0.04 -0.08 6.32 22.35 0.14 0.06 16 21 Cl -0.06 -0.22 27.96 -2.72 -0.08 -0.30 16 22 C -0.10 0.26 9.49 22.29 0.21 0.47 16 23 C -0.14 0.83 7.25 31.12 0.23 1.05 16 24 C 0.13 0.48 7.29 22.68 0.17 0.65 16 25 F -0.14 -1.48 15.55 44.97 0.70 -0.78 16 26 C -0.15 0.52 10.01 22.28 0.22 0.74 16 27 C -0.05 0.40 8.66 22.31 0.19 0.59 16 28 H 0.39 -3.96 8.70 -74.05 -0.64 -4.60 16 29 H 0.14 -1.55 7.96 -2.39 -0.02 -1.57 16 30 H -0.31 -0.36 7.11 99.48 0.71 0.35 16 31 H -0.28 1.26 7.00 99.48 0.70 1.95 16 32 H 0.16 -1.75 6.41 -2.90 -0.02 -1.77 16 33 H 0.42 -4.01 6.73 -92.71 -0.62 -4.63 16 34 H 0.11 -0.97 7.73 -2.39 -0.02 -0.99 16 35 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 36 H 0.16 -1.51 6.64 -2.91 -0.02 -1.53 16 37 H 0.16 -0.77 8.06 -2.91 -0.02 -0.80 16 38 H 0.16 -0.96 8.06 -2.91 -0.02 -0.98 16 39 H 0.07 -0.27 8.14 -2.39 -0.02 -0.28 16 40 H 0.10 -0.73 6.30 -2.39 -0.02 -0.75 16 41 H 0.16 -1.16 8.06 -2.92 -0.02 -1.19 16 42 H 0.16 -1.98 4.82 -2.91 -0.01 -2.00 16 Total: 0.00 -23.33 385.26 1.04 -22.28 By element: Atomic # 1 Polarization: -20.83 SS G_CDS: -0.12 Total: -20.94 kcal Atomic # 6 Polarization: 8.61 SS G_CDS: 2.84 Total: 11.45 kcal Atomic # 7 Polarization: 2.30 SS G_CDS: -2.31 Total: -0.01 kcal Atomic # 8 Polarization: -5.38 SS G_CDS: -1.97 Total: -7.35 kcal Atomic # 9 Polarization: -1.48 SS G_CDS: 0.70 Total: -0.78 kcal Atomic # 14 Polarization: -6.06 SS G_CDS: 2.05 Total: -4.02 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -0.15 Total: -0.64 kcal Total: -23.33 1.04 -22.28 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.150 kcal (2) G-P(sol) polarization free energy of solvation -23.329 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.478 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.044 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds