Wall clock time and date at job start Mon Mar 8 2021 04:34:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86302 * 109.47404 * 2 1 4 4 C 1.50702 * 109.46921 * 239.99725 * 2 1 3 5 5 C 1.38234 * 120.00109 * 300.00256 * 4 2 1 6 6 C 1.38232 * 119.99914 * 179.97438 * 5 4 2 7 7 C 1.38233 * 119.99853 * 0.02562 * 6 5 4 8 8 C 1.50704 * 119.99969 * 179.97438 * 7 6 5 9 9 C 1.50705 * 109.46899 * 89.99666 * 8 7 6 10 10 O 1.21278 * 120.00250 * 359.97438 * 9 8 7 11 11 N 1.34783 * 119.99542 * 179.97438 * 9 8 7 12 12 C 1.46502 * 119.99683 * 179.97438 * 11 9 8 13 13 H 1.09007 * 112.90475 * 23.75266 * 12 11 9 14 14 C 1.53779 * 113.61301 * 154.99921 * 12 11 9 15 15 C 1.53787 * 87.07963 * 89.11687 * 14 12 11 16 16 H 1.08994 * 113.61447 * 270.88515 * 15 14 12 17 17 C 1.50702 * 113.61150 * 139.98062 * 15 14 12 18 18 C 1.38206 * 119.98003 * 299.72028 * 17 15 14 19 19 C 1.38348 * 119.99626 * 179.76612 * 18 17 15 20 20 Cl 1.73603 * 120.01684 * 180.25850 * 19 18 17 21 21 C 1.38441 * 119.96457 * 0.49689 * 19 18 17 22 22 Cl 1.73595 * 120.02334 * 179.74151 * 21 19 18 23 23 C 1.38349 * 119.95857 * 359.76096 * 21 19 18 24 24 C 1.38204 * 120.00180 * 0.02562 * 23 21 19 25 25 C 1.53779 * 113.61564 * 252.49989 * 12 11 9 26 26 C 1.38234 * 120.00421 * 0.24830 * 7 6 5 27 27 C 1.38233 * 119.99548 * 119.97992 * 4 2 1 28 28 H 0.96699 * 113.99836 * 59.99671 * 1 2 3 29 29 H 1.09007 * 109.47179 * 119.99883 * 2 1 3 30 30 H 1.48502 * 109.99912 * 59.99916 * 3 2 1 31 31 H 1.48498 * 110.00018 * 181.31929 * 3 2 1 32 32 H 1.08000 * 119.99820 * 359.97438 * 5 4 2 33 33 H 1.07997 * 120.00283 * 179.97438 * 6 5 4 34 34 H 1.08994 * 109.47027 * 329.99873 * 8 7 6 35 35 H 1.08996 * 109.47307 * 209.99243 * 8 7 6 36 36 H 0.96996 * 119.99920 * 359.97438 * 11 9 8 37 37 H 1.08997 * 113.61646 * 334.57319 * 14 12 11 38 38 H 1.09000 * 113.61527 * 203.66590 * 14 12 11 39 39 H 1.07998 * 120.00172 * 0.03114 * 18 17 15 40 40 H 1.08008 * 119.99880 * 180.02562 * 23 21 19 41 41 H 1.08005 * 119.98001 * 179.97438 * 24 23 21 42 42 H 1.09002 * 113.61557 * 156.33711 * 25 12 11 43 43 H 1.09004 * 113.61501 * 25.43131 * 25 12 11 44 44 H 1.08003 * 120.00224 * 179.73206 * 26 7 6 45 45 H 1.07998 * 120.00308 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.5973 -2.0339 -1.4492 6 6 2.0576 -2.6854 -2.5781 7 6 2.8523 -2.0136 -3.4880 8 6 3.3547 -2.7241 -4.7185 9 6 2.3619 -2.5507 -5.8391 10 8 1.3464 -1.9135 -5.6563 11 7 2.6028 -3.1039 -7.0443 12 6 1.6375 -2.9358 -8.1334 13 1 1.0091 -2.0536 -8.0111 14 6 2.2613 -3.0584 -9.5337 15 6 1.9764 -4.5669 -9.4425 16 1 2.7871 -5.1378 -8.9901 17 6 1.4857 -5.1677 -10.7346 18 6 0.3153 -4.7089 -11.3089 19 6 -0.1329 -5.2569 -12.4976 20 17 -1.5994 -4.6764 -13.2230 21 6 0.5861 -6.2717 -13.1057 22 17 0.0215 -6.9650 -14.5937 23 6 1.7546 -6.7334 -12.5265 24 6 2.2033 -6.1818 -11.3414 25 6 0.8477 -4.2144 -8.4593 26 6 3.1910 -0.6919 -3.2665 27 6 2.7256 -0.0385 -2.1406 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 0.8900 30 1 1.5616 2.4679 1.2085 31 1 3.5347 1.7702 -0.0321 32 1 0.9767 -2.5588 -0.7380 33 1 1.7970 -3.7195 -2.7488 34 1 3.4758 -3.7853 -4.5013 35 1 4.3148 -2.3020 -5.0153 36 1 3.4153 -3.6132 -7.1905 37 1 3.3235 -2.8156 -9.5613 38 1 1.6900 -2.5524 -10.3120 39 1 -0.2471 -3.9198 -10.8321 40 1 2.3163 -7.5248 -13.0006 41 1 3.1154 -6.5428 -10.8893 42 1 -0.1101 -4.0244 -8.9438 43 1 0.7687 -4.9048 -7.6195 44 1 3.8156 -0.1683 -3.9752 45 1 2.9866 0.9954 -1.9697 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:34:41 Heat of formation + Delta-G solvation = -0.322667 kcal Electronic energy + Delta-G solvation = -29485.743935 eV Core-core repulsion = 25101.033365 eV Total energy + Delta-G solvation = -4384.710569 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.073 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.67279 -40.88923 -40.13226 -39.00403 -37.63844 -37.57086 -37.41431 -34.53634 -33.91660 -31.94790 -31.92174 -31.69765 -29.65052 -26.68247 -26.47948 -25.51186 -24.05951 -23.79584 -22.87113 -22.28412 -21.34168 -20.17376 -18.67716 -18.43443 -17.99074 -17.31330 -17.08789 -16.83911 -16.66309 -16.46393 -16.24007 -15.99087 -15.73227 -15.42601 -15.23714 -15.16763 -14.85218 -14.70580 -14.48563 -14.45054 -14.04690 -13.76232 -13.60178 -13.44877 -13.27319 -13.01948 -12.94491 -12.89436 -12.76356 -12.38333 -12.26139 -12.25164 -12.03934 -11.96642 -11.81175 -11.68887 -11.54582 -11.22767 -10.95401 -10.44906 -10.04910 -9.95834 -9.86036 -9.59756 -9.58537 -5.00774 -0.11533 0.05917 0.25691 0.47031 0.80141 1.20191 1.30600 1.60384 1.67459 1.92552 2.17281 2.36513 2.81074 3.44954 3.50000 3.57855 3.64134 3.65656 3.70920 3.81314 3.91993 3.95386 4.06171 4.07315 4.08362 4.12381 4.27390 4.28260 4.38707 4.47443 4.49648 4.63545 4.64986 4.74104 4.74579 4.79728 4.87844 4.90167 5.00155 5.03759 5.05084 5.06488 5.10533 5.20780 5.39662 5.42527 5.55240 5.59641 5.60821 5.68102 6.03690 6.61105 6.71438 7.33172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.077 4.077 3 Si 0.774 3.226 4 C -0.129 4.129 5 C -0.109 4.109 6 C -0.116 4.116 7 C -0.072 4.072 8 C -0.098 4.098 9 C 0.516 3.484 10 O -0.577 6.577 11 N -0.701 5.701 12 C 0.116 3.884 13 H 0.080 0.920 14 C -0.126 4.126 15 C -0.062 4.062 16 H 0.129 0.871 17 C -0.052 4.052 18 C -0.103 4.103 19 C -0.045 4.045 20 Cl -0.063 7.063 21 C -0.053 4.053 22 Cl -0.064 7.064 23 C -0.100 4.100 24 C -0.092 4.092 25 C -0.147 4.147 26 C -0.110 4.110 27 C -0.124 4.124 28 H 0.393 0.607 29 H 0.105 0.895 30 H -0.299 1.299 31 H -0.281 1.281 32 H 0.121 0.879 33 H 0.131 0.869 34 H 0.129 0.871 35 H 0.134 0.866 36 H 0.419 0.581 37 H 0.095 0.905 38 H 0.095 0.905 39 H 0.149 0.851 40 H 0.157 0.843 41 H 0.169 0.831 42 H 0.089 0.911 43 H 0.071 0.929 44 H 0.143 0.857 45 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.783 -1.623 -1.834 8.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.187 4.187 3 Si 0.680 3.320 4 C -0.129 4.129 5 C -0.127 4.127 6 C -0.134 4.134 7 C -0.072 4.072 8 C -0.137 4.137 9 C 0.304 3.696 10 O -0.456 6.456 11 N -0.353 5.353 12 C 0.010 3.990 13 H 0.099 0.901 14 C -0.163 4.163 15 C -0.080 4.080 16 H 0.147 0.853 17 C -0.052 4.052 18 C -0.121 4.121 19 C -0.072 4.072 20 Cl -0.034 7.034 21 C -0.081 4.081 22 Cl -0.035 7.035 23 C -0.119 4.119 24 C -0.110 4.110 25 C -0.185 4.185 26 C -0.128 4.128 27 C -0.142 4.142 28 H 0.243 0.757 29 H 0.122 0.878 30 H -0.227 1.227 31 H -0.208 1.208 32 H 0.139 0.861 33 H 0.149 0.851 34 H 0.147 0.853 35 H 0.152 0.848 36 H 0.257 0.743 37 H 0.114 0.886 38 H 0.113 0.887 39 H 0.166 0.834 40 H 0.175 0.825 41 H 0.187 0.813 42 H 0.108 0.892 43 H 0.090 0.910 44 H 0.161 0.839 45 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 7.441 -0.905 -0.952 7.556 hybrid contribution -0.399 -0.919 -0.171 1.016 sum 7.042 -1.823 -1.123 7.361 Atomic orbital electron populations 1.86445 1.17544 1.82220 1.50386 1.25223 0.85104 1.11085 0.97252 0.93599 0.78021 0.75674 0.84753 1.20402 0.99734 0.95378 0.97396 1.21072 0.99345 0.94348 0.97940 1.21235 0.97286 1.00672 0.94188 1.19599 0.97658 0.94507 0.95453 1.20762 0.99014 1.04375 0.89577 1.20988 0.86926 0.77738 0.83987 1.90750 1.29953 1.42024 1.82867 1.45557 1.24575 1.55085 1.10110 1.21765 0.91737 0.98457 0.87006 0.90145 1.23377 1.03171 0.94531 0.95265 1.21685 0.99188 0.96123 0.91009 0.85314 1.19950 0.93232 0.95442 0.96622 1.21067 0.97324 1.00775 0.92953 1.20956 0.91045 0.98411 0.96813 1.98404 1.34347 1.87776 1.82902 1.21048 0.97831 0.98032 0.91168 1.98402 1.89086 1.83450 1.32542 1.21357 0.93633 1.00621 0.96262 1.21505 1.00747 0.94897 0.93883 1.23576 0.98147 0.97638 0.99169 1.21248 1.00030 0.94147 0.97340 1.21170 0.98267 0.99985 0.94751 0.75687 0.87751 1.22682 1.20770 0.86116 0.85061 0.85285 0.84841 0.74323 0.88649 0.88698 0.83377 0.82505 0.81342 0.89235 0.90974 0.83933 0.84237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.06 12.77 -148.98 -1.90 -3.96 16 2 C -0.08 -0.18 2.82 71.24 0.20 0.02 16 3 Si 0.77 -0.13 29.79 68.60 2.04 1.91 16 4 C -0.13 -0.39 5.39 -19.87 -0.11 -0.50 16 5 C -0.11 -0.45 9.61 22.27 0.21 -0.24 16 6 C -0.12 -0.24 9.70 22.27 0.22 -0.03 16 7 C -0.07 0.01 4.37 -19.87 -0.09 -0.08 16 8 C -0.10 0.71 5.83 29.10 0.17 0.88 16 9 C 0.52 -0.86 7.82 87.66 0.69 -0.17 16 10 O -0.58 -5.27 15.64 -3.02 -0.05 -5.31 16 11 N -0.70 5.47 5.26 -440.02 -2.32 3.16 16 12 C 0.12 -0.63 4.32 45.52 0.20 -0.44 16 13 H 0.08 0.04 7.47 -2.38 -0.02 0.02 16 14 C -0.13 1.19 7.29 31.12 0.23 1.42 16 15 C -0.06 0.62 3.86 -11.01 -0.04 0.58 16 16 H 0.13 -1.87 8.09 -2.39 -0.02 -1.88 16 17 C -0.05 0.31 5.29 -19.87 -0.11 0.21 16 18 C -0.10 0.22 8.41 22.29 0.19 0.41 16 19 C -0.04 -0.09 6.32 22.34 0.14 0.05 16 20 Cl -0.06 -0.27 27.96 -2.72 -0.08 -0.35 16 21 C -0.05 -0.09 6.32 22.34 0.14 0.05 16 22 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.32 16 23 C -0.10 0.33 9.83 22.29 0.22 0.55 16 24 C -0.09 0.65 9.71 22.27 0.22 0.86 16 25 C -0.15 0.90 7.25 31.12 0.23 1.12 16 26 C -0.11 -0.01 9.70 22.27 0.22 0.21 16 27 C -0.12 -0.13 8.67 22.27 0.19 0.07 16 28 H 0.39 -1.38 8.70 -74.06 -0.64 -2.03 16 29 H 0.11 0.34 7.96 -2.38 -0.02 0.32 16 30 H -0.30 -2.10 7.11 99.48 0.71 -1.40 16 31 H -0.28 -0.99 7.11 99.48 0.71 -0.28 16 32 H 0.12 0.48 8.06 -2.91 -0.02 0.45 16 33 H 0.13 -0.13 8.06 -2.91 -0.02 -0.16 16 34 H 0.13 -1.54 8.08 -2.39 -0.02 -1.56 16 35 H 0.13 -1.70 8.08 -2.39 -0.02 -1.72 16 36 H 0.42 -6.23 8.70 -92.71 -0.81 -7.04 16 37 H 0.09 -1.14 8.14 -2.39 -0.02 -1.15 16 38 H 0.09 -0.76 7.73 -2.39 -0.02 -0.78 16 39 H 0.15 -0.57 6.64 -2.91 -0.02 -0.59 16 40 H 0.16 -1.03 8.06 -2.91 -0.02 -1.05 16 41 H 0.17 -2.22 8.06 -2.91 -0.02 -2.25 16 42 H 0.09 -0.43 6.29 -2.39 -0.02 -0.44 16 43 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 44 H 0.14 -0.63 8.06 -2.91 -0.02 -0.65 16 45 H 0.14 -0.40 4.88 -2.91 -0.01 -0.42 16 Total: 0.00 -23.26 405.33 0.38 -22.88 By element: Atomic # 1 Polarization: -22.61 SS G_CDS: -0.35 Total: -22.96 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: 3.11 Total: 4.96 kcal Atomic # 7 Polarization: 5.47 SS G_CDS: -2.32 Total: 3.16 kcal Atomic # 8 Polarization: -7.33 SS G_CDS: -1.95 Total: -9.28 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: 2.04 Total: 1.91 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -0.15 Total: -0.67 kcal Total: -23.26 0.38 -22.88 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.559 kcal (2) G-P(sol) polarization free energy of solvation -23.263 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.703 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.380 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.882 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds