Wall clock time and date at job start Mon Mar 8 2021 04:35:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86296 * 109.47247 * 2 1 4 4 C 1.50701 * 109.46674 * 119.99939 * 2 1 3 5 5 C 1.37950 * 119.92337 * 65.25824 * 4 2 1 6 6 C 1.39595 * 119.87314 * 180.24775 * 5 4 2 7 7 C 1.47845 * 120.13500 * 179.76508 * 6 5 4 8 8 O 1.21551 * 120.00451 * 359.73049 * 7 6 5 9 9 N 1.34780 * 119.99671 * 179.72571 * 7 6 5 10 10 C 1.46503 * 120.00107 * 180.02562 * 9 7 6 11 11 H 1.08992 * 112.85047 * 23.80244 * 10 9 7 12 12 C 1.53778 * 113.61458 * 155.00234 * 10 9 7 13 13 C 1.53776 * 87.08369 * 89.19643 * 12 10 9 14 14 H 1.09000 * 113.61458 * 270.79551 * 13 12 10 15 15 C 1.50704 * 113.61447 * 139.97780 * 13 12 10 16 16 C 1.38220 * 119.97785 * 119.99913 * 15 13 12 17 17 C 1.38255 * 120.03858 * 179.97438 * 16 15 13 18 18 C 1.38301 * 119.99621 * 0.02562 * 17 16 15 19 19 Cl 1.73597 * 120.01968 * 179.97438 * 18 17 16 20 20 C 1.38486 * 119.96478 * 0.05149 * 18 17 16 21 21 Cl 1.73599 * 120.01956 * 179.97438 * 20 18 17 22 22 C 1.38244 * 119.98414 * 300.02541 * 15 13 12 23 23 C 1.53782 * 113.68632 * 252.53725 * 10 9 7 24 24 C 1.39544 * 119.71935 * 359.49778 * 6 5 4 25 25 C 1.38069 * 119.84554 * 0.24556 * 24 6 5 26 26 Br 1.89099 * 119.94093 * 179.97438 * 25 24 6 27 27 C 1.38362 * 119.92256 * 245.00032 * 4 2 1 28 28 H 0.96706 * 113.99504 * 59.99914 * 1 2 3 29 29 H 1.09000 * 109.46865 * 239.99992 * 2 1 3 30 30 H 1.48499 * 109.99944 * 298.68135 * 3 2 1 31 31 H 1.48503 * 109.99755 * 59.99669 * 3 2 1 32 32 H 1.08005 * 120.05887 * 359.97438 * 5 4 2 33 33 H 0.97005 * 120.00134 * 0.02562 * 9 7 6 34 34 H 1.09006 * 113.61688 * 334.64642 * 12 10 9 35 35 H 1.09006 * 113.61293 * 203.74809 * 12 10 9 36 36 H 1.08002 * 119.98722 * 0.02562 * 16 15 13 37 37 H 1.07995 * 120.00141 * 179.74971 * 17 16 15 38 38 H 1.08002 * 119.99658 * 359.97438 * 22 15 13 39 39 H 1.09003 * 113.61228 * 156.32792 * 23 10 9 40 40 H 1.08999 * 113.61988 * 25.41370 * 23 10 9 41 41 H 1.07998 * 120.07355 * 180.27679 * 24 6 5 42 42 H 1.07997 * 119.85459 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6888 -2.0586 1.3939 6 6 2.1500 -2.7145 2.5366 7 6 1.8889 -4.1581 2.7201 8 8 1.2673 -4.7753 1.8774 9 7 2.3403 -4.7898 3.8218 10 6 2.0821 -6.2204 4.0035 11 1 1.9051 -6.7414 3.0626 12 6 3.1062 -6.9207 4.9122 13 6 2.1920 -6.5535 6.0929 14 1 2.4144 -5.5805 6.5311 15 6 2.0699 -7.6456 7.1242 16 6 2.4614 -7.4105 8.4288 17 6 2.3494 -8.4113 9.3760 18 6 1.8459 -9.6487 9.0182 19 17 1.7056 -10.9061 10.2069 20 6 1.4551 -9.8848 7.7108 21 17 0.8236 -11.4377 7.2599 22 6 1.5669 -8.8821 6.7648 23 6 1.0316 -6.5263 5.0841 24 6 2.8633 -2.0031 3.5022 25 6 3.1040 -0.6552 3.3243 26 35 4.0696 0.3116 4.6314 27 6 2.6391 -0.0101 2.1912 28 1 -0.3933 0.4418 -0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 1.5879 2.4585 -1.2242 31 1 1.5615 2.4678 1.2085 32 1 1.1394 -2.6045 0.6412 33 1 2.8361 -4.2972 4.4945 34 1 4.0763 -6.4244 4.9402 35 1 3.1835 -7.9938 4.7370 36 1 2.8542 -6.4442 8.7087 37 1 2.6592 -8.2283 10.3942 38 1 1.2612 -9.0651 5.7452 39 1 0.5418 -7.4916 4.9560 40 1 0.3270 -5.7116 5.2511 41 1 3.2266 -2.5058 4.3863 42 1 2.8294 1.0444 2.0566 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:35:25 Heat of formation + Delta-G solvation = 7.635098 kcal Electronic energy + Delta-G solvation = -29911.580892 eV Core-core repulsion = 25342.935013 eV Total energy + Delta-G solvation = -4568.645879 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.968 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.97404 -41.17942 -40.10781 -39.02052 -37.84725 -37.53605 -37.44468 -34.88534 -33.71633 -33.13034 -32.05064 -31.62669 -30.52658 -27.17262 -26.94203 -26.73015 -25.21995 -24.10544 -22.86577 -22.72134 -21.66463 -20.44170 -19.03867 -18.70087 -18.58867 -17.74084 -17.46034 -17.21517 -16.80085 -16.58466 -16.25868 -16.18998 -15.66985 -15.56990 -15.33489 -15.22296 -14.99615 -14.86659 -14.62766 -14.39481 -14.06244 -13.85207 -13.78308 -13.72432 -13.58152 -13.01317 -12.88445 -12.85057 -12.50840 -12.46148 -12.38692 -12.07392 -12.02254 -11.87727 -11.83507 -11.73302 -11.53487 -11.44722 -11.10954 -10.68012 -10.38104 -10.19513 -10.05919 -9.94598 -9.66674 -5.11443 -0.53644 -0.20183 -0.19614 -0.04899 0.36751 0.81366 1.08412 1.18066 1.44906 1.52949 1.79980 1.86504 2.24499 2.43074 3.03305 3.19582 3.29874 3.37408 3.46127 3.47980 3.50558 3.68793 3.70846 3.82440 3.87040 3.91201 3.93474 4.04892 4.07850 4.16816 4.22368 4.38743 4.42152 4.50829 4.58222 4.64436 4.68779 4.72266 4.79232 4.84581 4.85964 4.89479 4.95367 5.06132 5.23312 5.32966 5.40507 5.45666 6.26390 6.28633 7.01859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.076 4.076 3 Si 0.678 3.322 4 C -0.071 4.071 5 C -0.016 4.016 6 C -0.129 4.129 7 C 0.566 3.434 8 O -0.524 6.524 9 N -0.709 5.709 10 C 0.120 3.880 11 H 0.110 0.890 12 C -0.135 4.135 13 C -0.075 4.075 14 H 0.104 0.896 15 C -0.054 4.054 16 C -0.099 4.099 17 C -0.095 4.095 18 C -0.036 4.036 19 Cl -0.047 7.047 20 C -0.028 4.028 21 Cl -0.046 7.046 22 C -0.097 4.097 23 C -0.145 4.145 24 C -0.053 4.053 25 C -0.094 4.094 26 Br -0.032 7.032 27 C -0.061 4.061 28 H 0.384 0.616 29 H 0.085 0.915 30 H -0.254 1.254 31 H -0.250 1.250 32 H 0.147 0.853 33 H 0.401 0.599 34 H 0.081 0.919 35 H 0.101 0.899 36 H 0.139 0.861 37 H 0.144 0.856 38 H 0.144 0.856 39 H 0.098 0.902 40 H 0.079 0.921 41 H 0.138 0.862 42 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.422 3.829 -0.583 5.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.186 4.186 3 Si 0.578 3.422 4 C -0.072 4.072 5 C -0.035 4.035 6 C -0.133 4.133 7 C 0.353 3.647 8 O -0.400 6.400 9 N -0.361 5.361 10 C 0.015 3.985 11 H 0.128 0.872 12 C -0.173 4.173 13 C -0.094 4.094 14 H 0.122 0.878 15 C -0.055 4.055 16 C -0.117 4.117 17 C -0.114 4.114 18 C -0.064 4.064 19 Cl -0.018 7.018 20 C -0.055 4.055 21 Cl -0.017 7.017 22 C -0.116 4.116 23 C -0.183 4.183 24 C -0.074 4.074 25 C -0.174 4.174 26 Br 0.054 6.946 27 C -0.081 4.081 28 H 0.233 0.767 29 H 0.102 0.898 30 H -0.179 1.179 31 H -0.175 1.175 32 H 0.165 0.835 33 H 0.237 0.763 34 H 0.100 0.900 35 H 0.120 0.880 36 H 0.156 0.844 37 H 0.161 0.839 38 H 0.161 0.839 39 H 0.116 0.884 40 H 0.097 0.903 41 H 0.156 0.844 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 4.145 4.003 -0.080 5.763 hybrid contribution -1.151 -0.384 -0.193 1.229 sum 2.994 3.619 -0.274 4.705 Atomic orbital electron populations 1.86591 1.17224 1.80253 1.50024 1.24772 0.84989 1.11098 0.97695 0.95122 0.91554 0.74454 0.81032 1.19208 0.98788 0.93649 0.95603 1.21278 0.93287 0.93190 0.95717 1.19895 1.02945 0.93664 0.96789 1.18079 0.78799 0.86326 0.81471 1.90826 1.39544 1.67034 1.42568 1.45564 1.57748 1.09882 1.22880 1.21869 0.96188 0.80881 0.99589 0.87184 1.23455 0.97951 1.02161 0.93750 1.21670 0.98086 0.96979 0.92640 0.87790 1.19722 0.97208 0.94069 0.94485 1.21151 0.99108 0.99437 0.92038 1.21094 0.98574 0.90649 1.01083 1.20851 1.04101 0.91946 0.89468 1.98415 1.96399 1.51167 1.55842 1.20794 1.02403 0.89373 0.92966 1.98418 1.84878 1.25878 1.92488 1.20901 0.99872 0.91392 0.99452 1.23603 0.96576 1.03544 0.94622 1.21255 0.95533 0.92338 0.98269 1.21593 1.04205 0.95032 0.96521 1.96841 1.72325 1.73671 1.51782 1.21204 0.95286 1.00099 0.91485 0.76745 0.89756 1.17905 1.17464 0.83504 0.76317 0.90030 0.88019 0.84355 0.83857 0.83867 0.88382 0.90261 0.84384 0.84011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.14 12.81 -35.23 -0.45 -0.59 16 2 C -0.08 0.09 2.79 36.01 0.10 0.19 16 3 Si 0.68 -1.31 29.84 -169.99 -5.07 -6.38 16 4 C -0.07 0.00 5.38 -104.68 -0.56 -0.56 16 5 C -0.02 -0.01 9.23 -39.18 -0.36 -0.38 16 6 C -0.13 -0.03 5.87 -104.97 -0.62 -0.65 16 7 C 0.57 0.67 7.77 -12.33 -0.10 0.57 16 8 O -0.52 -2.59 15.95 5.32 0.08 -2.51 16 9 N -0.71 1.37 5.22 -53.96 -0.28 1.09 16 10 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 11 H 0.11 -0.04 7.46 -51.93 -0.39 -0.43 16 12 C -0.14 0.50 7.29 -25.92 -0.19 0.31 16 13 C -0.08 0.27 3.86 -90.96 -0.35 -0.08 16 14 H 0.10 -0.50 8.09 -51.93 -0.42 -0.92 16 15 C -0.05 0.11 5.29 -104.62 -0.55 -0.45 16 16 C -0.10 0.21 9.71 -39.58 -0.38 -0.18 16 17 C -0.10 0.08 9.83 -39.55 -0.39 -0.30 16 18 C -0.04 -0.03 6.32 -39.47 -0.25 -0.28 16 19 Cl -0.05 -0.08 27.96 -51.86 -1.45 -1.53 16 20 C -0.03 -0.02 6.32 -39.47 -0.25 -0.27 16 21 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 22 C -0.10 0.09 8.39 -39.56 -0.33 -0.24 16 23 C -0.14 0.35 7.26 -25.92 -0.19 0.16 16 24 C -0.05 0.08 9.28 -39.16 -0.36 -0.28 16 25 C -0.09 0.07 6.22 -39.57 -0.25 -0.18 16 26 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 27 C -0.06 0.03 8.40 -39.47 -0.33 -0.30 16 28 H 0.38 -1.42 8.74 45.56 0.40 -1.02 16 29 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 30 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 31 H -0.25 -0.25 7.05 56.52 0.40 0.15 16 32 H 0.15 0.23 7.65 -52.48 -0.40 -0.17 16 33 H 0.40 -1.79 6.74 -40.82 -0.28 -2.07 16 34 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 35 H 0.10 -0.37 7.72 -51.93 -0.40 -0.77 16 36 H 0.14 -0.60 8.05 -52.49 -0.42 -1.02 16 37 H 0.14 -0.35 8.06 -52.49 -0.42 -0.77 16 38 H 0.14 -0.31 6.66 -52.49 -0.35 -0.66 16 39 H 0.10 -0.25 6.31 -51.93 -0.33 -0.58 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.14 -0.57 6.40 -52.49 -0.34 -0.91 16 42 H 0.14 -0.25 4.85 -52.49 -0.25 -0.51 16 LS Contribution 402.10 15.07 6.06 6.06 Total: 0.00 -7.78 402.10 -14.57 -22.34 By element: Atomic # 1 Polarization: -7.19 SS G_CDS: -4.06 Total: -11.25 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -5.65 Total: -3.45 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: -0.28 Total: 1.09 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -0.37 Total: -3.10 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.07 Total: -6.38 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -2.90 Total: -3.05 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -7.78 -14.57 -22.34 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.980 kcal (2) G-P(sol) polarization free energy of solvation -7.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.565 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.345 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.635 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds