Wall clock time and date at job start Mon Mar 8 2021 04:35:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.47203 * 2 1 4 4 C 1.50706 * 109.47214 * 240.00042 * 2 1 3 5 5 C 1.38402 * 119.82685 * 300.00312 * 4 2 1 6 6 C 1.37896 * 120.16985 * 180.02562 * 5 4 2 7 7 C 1.39831 * 119.82423 * 359.97438 * 6 5 4 8 8 C 1.47205 * 120.16880 * 179.97438 * 7 6 5 9 9 C 1.34815 * 120.00208 * 179.97438 * 8 7 6 10 10 C 1.46425 * 120.00064 * 179.97438 * 9 8 7 11 11 O 1.21701 * 120.00304 * 359.97438 * 10 9 8 12 12 N 1.34774 * 120.00187 * 179.97438 * 10 9 8 13 13 C 1.46506 * 120.00437 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.84158 * 23.80223 * 13 12 10 15 15 C 1.53779 * 113.61249 * 155.00069 * 13 12 10 16 16 C 1.53776 * 87.08164 * 89.20169 * 15 13 12 17 17 H 1.09002 * 113.61708 * 270.79716 * 16 15 13 18 18 C 1.50698 * 113.61621 * 139.97374 * 16 15 13 19 19 C 1.38208 * 119.98557 * 300.26090 * 18 16 15 20 20 C 1.38343 * 120.00309 * 180.25340 * 19 18 16 21 21 Cl 1.73599 * 120.02262 * 179.76737 * 20 19 18 22 22 C 1.38448 * 119.95892 * 359.48298 * 20 19 18 23 23 Cl 1.73603 * 120.02013 * 180.27923 * 22 20 19 24 24 C 1.38346 * 119.96449 * 0.26225 * 22 20 19 25 25 C 1.38209 * 119.99916 * 359.97438 * 24 22 20 26 26 C 1.53777 * 113.69167 * 252.53707 * 13 12 10 27 27 C 1.39835 * 119.66531 * 0.24724 * 7 6 5 28 28 C 1.37900 * 119.82287 * 359.49223 * 27 7 6 29 29 H 0.96699 * 113.99998 * 59.99894 * 1 2 3 30 30 H 1.09002 * 109.47363 * 120.00370 * 2 1 3 31 31 H 1.48500 * 109.99829 * 60.00127 * 3 2 1 32 32 H 1.48496 * 109.99860 * 181.31772 * 3 2 1 33 33 H 1.08000 * 119.91543 * 359.97438 * 5 4 2 34 34 H 1.07995 * 120.08758 * 179.97438 * 6 5 4 35 35 H 1.08005 * 120.00009 * 359.97438 * 8 7 6 36 36 H 1.07997 * 120.00080 * 359.97438 * 9 8 7 37 37 H 0.97003 * 120.00121 * 0.02562 * 12 10 9 38 38 H 1.09001 * 113.61808 * 334.64944 * 15 13 12 39 39 H 1.09009 * 113.60865 * 203.75124 * 15 13 12 40 40 H 1.08000 * 119.99522 * 359.97438 * 19 18 16 41 41 H 1.08000 * 120.00179 * 180.02562 * 24 22 20 42 42 H 1.07993 * 119.98391 * 179.97438 * 25 24 22 43 43 H 1.08999 * 113.61110 * 156.31995 * 26 13 12 44 44 H 1.09007 * 113.61114 * 25.41960 * 26 13 12 45 45 H 1.08001 * 120.09101 * 179.73283 * 27 7 6 46 46 H 1.07997 * 119.91167 * 180.24813 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5948 -2.0355 -1.4460 6 6 2.0510 -2.6925 -2.5693 7 6 2.8552 -2.0164 -3.4919 8 6 3.3468 -2.7106 -4.6933 9 6 4.1215 -2.0553 -5.5809 10 6 4.6110 -2.7460 -6.7756 11 8 4.3190 -3.9118 -6.9672 12 7 5.3851 -2.0907 -7.6633 13 6 5.8753 -2.7820 -8.8584 14 1 5.2538 -3.6318 -9.1405 15 6 6.1952 -1.8371 -10.0287 16 6 7.6148 -1.7260 -9.4481 17 1 7.7275 -0.9220 -8.7208 18 6 8.6973 -1.7226 -10.4966 19 6 8.8328 -2.7988 -11.3530 20 6 9.8297 -2.7984 -12.3122 21 17 10.0042 -4.1526 -13.3843 22 6 10.6845 -1.7147 -12.4205 23 17 11.9315 -1.7093 -13.6283 24 6 10.5442 -0.6358 -11.5659 25 6 9.5508 -0.6401 -10.6050 26 6 7.3779 -3.1060 -8.8121 27 6 3.1947 -0.6790 -3.2648 28 6 2.7263 -0.0341 -2.1395 29 1 -0.3933 0.4417 -0.7650 30 1 1.7924 -0.5139 0.8900 31 1 1.5615 2.4679 1.2085 32 1 3.5346 1.7702 -0.0321 33 1 0.9739 -2.5565 -0.7322 34 1 1.7879 -3.7266 -2.7359 35 1 3.0869 -3.7449 -4.8637 36 1 4.3811 -1.0208 -5.4109 37 1 5.6182 -1.1616 -7.5105 38 1 5.6371 -0.9013 -9.9996 39 1 6.1591 -2.3225 -11.0041 40 1 8.1632 -3.6422 -11.2705 41 1 11.2104 0.2100 -11.6500 42 1 9.4417 0.2020 -9.9377 43 1 7.6650 -3.9382 -9.4548 44 1 7.7745 -3.1944 -7.8006 45 1 3.8190 -0.1514 -3.9707 46 1 2.9843 0.9999 -1.9647 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:35:36 Heat of formation + Delta-G solvation = 19.656188 kcal Electronic energy + Delta-G solvation = -30122.493847 eV Core-core repulsion = 25610.423485 eV Total energy + Delta-G solvation = -4512.070362 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.073 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -41.65597 -40.73458 -40.36318 -39.08249 -37.75923 -37.57251 -37.44325 -35.04517 -34.51848 -32.22235 -31.94837 -31.78115 -31.05119 -27.39652 -26.69826 -26.17364 -24.40990 -24.01179 -23.75242 -22.68868 -22.06977 -20.56243 -20.08157 -18.92375 -18.52921 -18.05513 -17.26092 -17.11773 -16.82026 -16.62568 -16.44751 -16.16692 -16.01969 -15.73524 -15.52583 -15.23190 -15.16757 -15.03480 -14.85252 -14.54526 -14.45179 -14.15447 -13.83471 -13.70007 -13.59185 -13.43798 -13.24709 -13.00706 -12.94976 -12.90286 -12.41178 -12.28014 -12.24547 -12.04210 -12.02055 -11.82149 -11.68920 -11.56559 -11.34061 -11.24645 -11.06957 -10.42680 -10.10996 -9.97461 -9.96898 -9.59912 -9.21991 -4.98998 -0.53460 -0.11682 0.05863 0.40965 0.80018 0.90162 1.20041 1.32258 1.64442 1.98576 2.15124 2.24248 2.36520 2.83420 3.43156 3.48782 3.56512 3.60347 3.64218 3.68708 3.72117 3.83615 3.93174 3.96446 4.06795 4.12096 4.19003 4.23452 4.26626 4.27957 4.37485 4.45564 4.52772 4.62143 4.73559 4.78283 4.84392 4.85989 4.89088 4.98892 4.99808 5.02888 5.05399 5.10909 5.17706 5.19595 5.39209 5.42421 5.49681 5.58948 5.61636 5.65322 5.91651 6.57052 6.76469 7.24840 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.081 4.081 3 Si 0.783 3.217 4 C -0.112 4.112 5 C -0.109 4.109 6 C -0.104 4.104 7 C -0.081 4.081 8 C -0.023 4.023 9 C -0.206 4.206 10 C 0.544 3.456 11 O -0.593 6.593 12 N -0.692 5.692 13 C 0.113 3.887 14 H 0.081 0.919 15 C -0.125 4.125 16 C -0.062 4.062 17 H 0.129 0.871 18 C -0.052 4.052 19 C -0.103 4.103 20 C -0.045 4.045 21 Cl -0.063 7.063 22 C -0.053 4.053 23 Cl -0.064 7.064 24 C -0.100 4.100 25 C -0.092 4.092 26 C -0.146 4.146 27 C -0.093 4.093 28 C -0.122 4.122 29 H 0.396 0.604 30 H 0.104 0.896 31 H -0.304 1.304 32 H -0.281 1.281 33 H 0.126 0.874 34 H 0.134 0.866 35 H 0.120 0.880 36 H 0.168 0.832 37 H 0.420 0.580 38 H 0.096 0.904 39 H 0.097 0.903 40 H 0.149 0.851 41 H 0.158 0.842 42 H 0.170 0.830 43 H 0.091 0.909 44 H 0.071 0.929 45 H 0.161 0.839 46 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.819 8.605 0.893 8.690 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.190 4.190 3 Si 0.689 3.311 4 C -0.113 4.113 5 C -0.127 4.127 6 C -0.122 4.122 7 C -0.081 4.081 8 C -0.043 4.043 9 C -0.226 4.226 10 C 0.334 3.666 11 O -0.475 6.475 12 N -0.343 5.343 13 C 0.007 3.993 14 H 0.099 0.901 15 C -0.163 4.163 16 C -0.080 4.080 17 H 0.147 0.853 18 C -0.052 4.052 19 C -0.121 4.121 20 C -0.072 4.072 21 Cl -0.034 7.034 22 C -0.081 4.081 23 Cl -0.035 7.035 24 C -0.118 4.118 25 C -0.110 4.110 26 C -0.185 4.185 27 C -0.110 4.110 28 C -0.139 4.139 29 H 0.246 0.754 30 H 0.122 0.878 31 H -0.233 1.233 32 H -0.207 1.207 33 H 0.144 0.856 34 H 0.152 0.848 35 H 0.138 0.862 36 H 0.185 0.815 37 H 0.258 0.742 38 H 0.114 0.886 39 H 0.115 0.885 40 H 0.166 0.834 41 H 0.175 0.825 42 H 0.187 0.813 43 H 0.110 0.890 44 H 0.090 0.910 45 H 0.178 0.822 46 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -0.317 7.951 1.478 8.094 hybrid contribution 0.421 -1.092 -0.056 1.172 sum 0.104 6.860 1.422 7.006 Atomic orbital electron populations 1.86476 1.17284 1.82207 1.50537 1.25288 0.85321 1.11222 0.97174 0.93690 0.77830 0.74843 0.84777 1.20614 0.98565 0.95081 0.97027 1.21054 0.99588 0.94367 0.97659 1.21603 0.96429 1.00513 0.93651 1.19115 0.99482 0.94697 0.94813 1.22356 0.91844 0.99150 0.90912 1.23011 1.02754 1.02391 0.94430 1.18771 0.77798 0.85956 0.84055 1.90828 1.59981 1.18965 1.77764 1.45404 1.50873 1.16041 1.21995 1.21821 0.95027 0.96605 0.85832 0.90093 1.23384 0.94712 1.00679 0.97484 1.21682 0.91651 0.99154 0.95468 0.85261 1.19937 0.96658 0.92898 0.95743 1.21065 0.96862 1.00441 0.93770 1.20950 0.99256 0.90137 0.96867 1.98404 1.97230 1.43788 1.64022 1.21051 0.94111 0.96745 0.96148 1.98402 1.51715 1.98520 1.54836 1.21357 0.99545 0.96955 0.93984 1.21507 0.92941 0.99009 0.97519 1.23577 0.95549 0.97417 1.01920 1.21674 0.98639 0.93176 0.97544 1.21195 0.97972 1.00473 0.94279 0.75441 0.87814 1.23262 1.20738 0.85570 0.84803 0.86249 0.81501 0.74176 0.88569 0.88499 0.83380 0.82463 0.81302 0.89019 0.90998 0.82175 0.83209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.49 12.76 -148.98 -1.90 -1.41 16 2 C -0.08 0.17 2.82 71.24 0.20 0.37 16 3 Si 0.78 -3.53 29.77 68.60 2.04 -1.49 16 4 C -0.11 0.23 5.40 -19.78 -0.11 0.12 16 5 C -0.11 0.01 9.59 22.23 0.21 0.22 16 6 C -0.10 0.04 9.80 22.57 0.22 0.26 16 7 C -0.08 0.14 5.87 -20.15 -0.12 0.02 16 8 C -0.02 0.02 9.46 23.84 0.23 0.24 16 9 C -0.21 0.79 9.41 23.62 0.22 1.01 16 10 C 0.54 0.80 7.74 86.38 0.67 1.47 16 11 O -0.59 -6.99 15.83 -4.35 -0.07 -7.06 16 12 N -0.69 3.85 5.26 -444.26 -2.34 1.52 16 13 C 0.11 -0.46 4.32 45.51 0.20 -0.26 16 14 H 0.08 0.15 7.46 -2.39 -0.02 0.13 16 15 C -0.12 1.09 7.29 31.12 0.23 1.31 16 16 C -0.06 0.58 3.86 -11.02 -0.04 0.54 16 17 H 0.13 -1.80 8.09 -2.39 -0.02 -1.82 16 18 C -0.05 0.30 5.29 -19.86 -0.11 0.19 16 19 C -0.10 0.19 8.38 22.29 0.19 0.38 16 20 C -0.04 -0.10 6.32 22.34 0.14 0.04 16 21 Cl -0.06 -0.29 27.96 -2.72 -0.08 -0.36 16 22 C -0.05 -0.10 6.32 22.35 0.14 0.05 16 23 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 24 C -0.10 0.31 9.83 22.29 0.22 0.53 16 25 C -0.09 0.63 9.71 22.27 0.22 0.84 16 26 C -0.15 0.76 7.25 31.12 0.23 0.99 16 27 C -0.09 0.51 9.41 22.58 0.21 0.73 16 28 C -0.12 0.63 8.65 22.23 0.19 0.82 16 29 H 0.40 -3.59 8.70 -74.06 -0.64 -4.23 16 30 H 0.10 -0.04 7.96 -2.39 -0.02 -0.06 16 31 H -0.30 -1.17 7.11 99.48 0.71 -0.47 16 32 H -0.28 0.19 7.11 99.48 0.71 0.90 16 33 H 0.13 -0.01 8.06 -2.91 -0.02 -0.03 16 34 H 0.13 -0.28 8.06 -2.91 -0.02 -0.30 16 35 H 0.12 0.32 7.52 -2.91 -0.02 0.30 16 36 H 0.17 -2.00 6.07 -2.91 -0.02 -2.02 16 37 H 0.42 -5.45 8.68 -92.71 -0.80 -6.26 16 38 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 39 H 0.10 -0.73 7.71 -2.38 -0.02 -0.75 16 40 H 0.15 -0.53 6.67 -2.91 -0.02 -0.55 16 41 H 0.16 -1.02 8.06 -2.91 -0.02 -1.05 16 42 H 0.17 -2.21 8.05 -2.91 -0.02 -2.23 16 43 H 0.09 -0.39 6.32 -2.39 -0.02 -0.40 16 44 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 45 H 0.16 -1.92 6.17 -2.91 -0.02 -1.94 16 46 H 0.15 -1.46 4.85 -2.91 -0.01 -1.47 16 Total: 0.00 -23.46 415.22 0.57 -22.89 By element: Atomic # 1 Polarization: -23.28 SS G_CDS: -0.35 Total: -23.63 kcal Atomic # 6 Polarization: 6.54 SS G_CDS: 3.34 Total: 9.88 kcal Atomic # 7 Polarization: 3.85 SS G_CDS: -2.34 Total: 1.52 kcal Atomic # 8 Polarization: -6.51 SS G_CDS: -1.97 Total: -8.48 kcal Atomic # 14 Polarization: -3.53 SS G_CDS: 2.04 Total: -1.49 kcal Atomic # 17 Polarization: -0.54 SS G_CDS: -0.15 Total: -0.69 kcal Total: -23.46 0.57 -22.89 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.550 kcal (2) G-P(sol) polarization free energy of solvation -23.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.085 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.893 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.656 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds