Wall clock time and date at job start Mon Mar 8 2021 04:35:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.47260 * 2 1 4 4 C 1.50699 * 109.47227 * 120.00319 * 2 1 3 5 5 C 1.38185 * 119.84089 * 254.97802 * 4 2 1 6 6 C 1.38319 * 120.14747 * 179.70062 * 5 4 2 7 7 F 1.35098 * 120.08702 * 180.32115 * 6 5 4 8 8 C 1.39811 * 119.82783 * 0.56706 * 6 5 4 9 9 C 1.47691 * 120.15381 * 179.72307 * 8 6 5 10 10 O 1.21571 * 120.00046 * 359.73305 * 9 8 6 11 11 N 1.34780 * 119.99852 * 179.72958 * 9 8 6 12 12 C 1.46498 * 119.99765 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.85474 * 336.19664 * 12 11 9 14 14 C 1.53959 * 113.53682 * 107.50733 * 12 11 9 15 15 C 1.53777 * 87.01933 * 89.18634 * 14 12 11 16 16 H 1.08998 * 113.61297 * 270.76430 * 15 14 12 17 17 C 1.50702 * 113.61291 * 139.95214 * 15 14 12 18 18 C 1.38220 * 119.98276 * 321.11983 * 17 15 14 19 19 C 1.38252 * 120.03974 * 180.29837 * 18 17 15 20 20 C 1.38297 * 119.99846 * 359.72149 * 19 18 17 21 21 Cl 1.73600 * 120.02144 * 180.02562 * 20 19 18 22 22 C 1.38486 * 119.96177 * 0.02562 * 20 19 18 23 23 Cl 1.73605 * 120.02029 * 180.02562 * 22 20 19 24 24 C 1.38247 * 119.98009 * 140.85730 * 17 15 14 25 25 C 1.53776 * 87.17484 * 25.36222 * 15 14 12 26 26 C 1.39652 * 119.68904 * 359.45384 * 8 6 5 27 27 C 1.38071 * 119.85590 * 0.27636 * 26 8 6 28 28 F 1.35101 * 119.92190 * 179.97438 * 27 26 8 29 29 H 0.96698 * 113.99818 * 299.99847 * 1 2 3 30 30 H 1.09007 * 109.46999 * 239.99745 * 2 1 3 31 31 H 1.48496 * 109.99750 * 300.00032 * 3 2 1 32 32 H 1.48497 * 110.00023 * 61.32065 * 3 2 1 33 33 H 1.07997 * 119.93010 * 0.02562 * 5 4 2 34 34 H 0.96998 * 120.00355 * 0.02562 * 11 9 8 35 35 H 1.08997 * 113.66337 * 334.65437 * 14 12 11 36 36 H 1.08999 * 113.61181 * 203.71078 * 14 12 11 37 37 H 1.07999 * 119.98250 * 0.02562 * 18 17 15 38 38 H 1.08004 * 120.00091 * 179.69630 * 19 18 17 39 39 H 1.08002 * 120.00316 * 359.97438 * 24 17 15 40 40 H 1.09005 * 113.61509 * 89.15704 * 25 15 14 41 41 H 1.08998 * 113.61210 * 219.97875 * 25 15 14 42 42 H 1.08003 * 120.07660 * 180.28954 * 26 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4535 0.0197 2.2810 6 6 2.9107 -0.6255 3.4159 7 9 3.4149 0.0900 4.4449 8 6 2.8544 -2.0203 3.4932 9 6 3.3462 -2.7170 4.6990 10 8 3.8058 -2.0778 5.6254 11 7 3.2854 -4.0614 4.7725 12 6 3.7728 -4.7524 5.9688 13 1 4.5072 -4.1695 6.5247 14 6 2.6474 -5.3304 6.8462 15 6 2.7543 -6.6100 6.0001 16 1 2.1136 -6.6051 5.1183 17 6 2.6321 -7.8780 6.8052 18 6 3.2167 -7.9618 8.0548 19 6 3.1106 -9.1267 8.7918 20 6 2.4143 -10.2070 8.2812 21 17 2.2801 -11.6698 9.2064 22 6 1.8241 -10.1212 7.0314 23 17 0.9491 -11.4762 6.3892 24 6 1.9308 -8.9549 6.2957 25 6 4.2083 -6.2039 5.7073 26 6 2.3257 -2.7514 2.4272 27 6 1.8679 -2.0937 1.3028 28 9 1.3567 -2.7997 0.2705 29 1 -0.3933 0.4417 0.7651 30 1 1.7924 -0.5139 -0.8900 31 1 1.5616 2.4678 -1.2085 32 1 1.5880 2.4585 1.2242 33 1 2.4999 1.0968 2.2181 34 1 2.9190 -4.5715 4.0332 35 1 1.6955 -4.8114 6.7348 36 1 2.9347 -5.4707 7.8883 37 1 3.7605 -7.1184 8.4540 38 1 3.5718 -9.1932 9.7662 39 1 1.4702 -8.8872 5.3211 40 1 4.9231 -6.5835 6.4375 41 1 4.5150 -6.3904 4.6782 42 1 2.2749 -3.8288 2.4822 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:35:41 Heat of formation + Delta-G solvation = -75.728267 kcal Electronic energy + Delta-G solvation = -33036.208148 eV Core-core repulsion = 27864.857414 eV Total energy + Delta-G solvation = -5171.350734 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.039 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -50.10182 -50.08603 -41.82124 -40.92826 -40.01807 -39.04134 -37.76894 -37.56944 -37.43242 -34.87478 -33.22363 -32.12280 -31.42206 -31.36833 -27.99668 -26.69133 -26.22339 -24.40570 -24.23573 -23.87319 -22.72912 -22.02216 -20.32819 -19.72069 -18.87929 -18.55826 -18.47754 -17.94825 -17.35674 -17.24878 -17.00292 -16.71459 -16.58122 -16.56887 -16.22601 -16.03480 -15.91691 -15.67931 -15.56284 -15.36637 -15.18548 -15.00430 -14.77176 -14.45130 -14.14802 -13.83227 -13.77276 -13.53976 -13.39168 -13.18169 -12.98940 -12.94748 -12.91937 -12.42714 -12.40685 -12.36401 -11.95817 -11.93142 -11.83802 -11.58595 -11.28287 -11.24744 -10.78486 -10.59989 -10.18421 -9.99078 -9.81666 -9.59998 -4.96140 -0.81013 -0.30242 -0.13057 0.06281 0.79997 1.15897 1.19868 1.38475 1.53956 1.82754 1.91624 2.23828 2.35478 2.79318 2.85309 3.11052 3.24730 3.41009 3.45975 3.51021 3.54250 3.67666 3.69533 3.79046 3.92200 4.00485 4.09725 4.16830 4.19807 4.32664 4.38289 4.38681 4.53082 4.63973 4.68215 4.69889 4.73465 4.79109 4.84275 4.88647 4.95743 5.03106 5.08259 5.13551 5.34472 5.39213 5.57647 5.59333 6.31631 6.38563 7.00181 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.087 4.087 3 Si 0.771 3.229 4 C -0.091 4.091 5 C -0.131 4.131 6 C 0.140 3.860 7 F -0.124 7.124 8 C -0.147 4.147 9 C 0.561 3.439 10 O -0.559 6.559 11 N -0.690 5.690 12 C 0.113 3.887 13 H 0.093 0.907 14 C -0.142 4.142 15 C -0.068 4.068 16 H 0.118 0.882 17 C -0.050 4.050 18 C -0.097 4.097 19 C -0.099 4.099 20 C -0.053 4.053 21 Cl -0.064 7.064 22 C -0.045 4.045 23 Cl -0.062 7.062 24 C -0.099 4.099 25 C -0.123 4.123 26 C -0.076 4.076 27 C 0.104 3.896 28 F -0.128 7.128 29 H 0.390 0.610 30 H 0.133 0.867 31 H -0.295 1.295 32 H -0.271 1.271 33 H 0.170 0.830 34 H 0.416 0.584 35 H 0.070 0.930 36 H 0.104 0.896 37 H 0.162 0.838 38 H 0.155 0.845 39 H 0.156 0.844 40 H 0.108 0.892 41 H 0.092 0.908 42 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.516 0.942 -2.803 3.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.195 4.195 3 Si 0.675 3.325 4 C -0.092 4.092 5 C -0.149 4.149 6 C 0.119 3.881 7 F -0.102 7.102 8 C -0.151 4.151 9 C 0.348 3.652 10 O -0.438 6.438 11 N -0.342 5.342 12 C 0.008 3.992 13 H 0.111 0.889 14 C -0.180 4.180 15 C -0.086 4.086 16 H 0.136 0.864 17 C -0.050 4.050 18 C -0.115 4.115 19 C -0.118 4.118 20 C -0.081 4.081 21 Cl -0.035 7.035 22 C -0.072 4.072 23 Cl -0.033 7.033 24 C -0.117 4.117 25 C -0.161 4.161 26 C -0.095 4.095 27 C 0.084 3.916 28 F -0.106 7.106 29 H 0.240 0.760 30 H 0.151 0.849 31 H -0.222 1.222 32 H -0.197 1.197 33 H 0.187 0.813 34 H 0.255 0.745 35 H 0.089 0.911 36 H 0.122 0.878 37 H 0.179 0.821 38 H 0.173 0.827 39 H 0.174 0.826 40 H 0.126 0.874 41 H 0.111 0.889 42 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges 2.629 1.616 -2.655 4.071 hybrid contribution -1.558 -0.871 0.392 1.828 sum 1.071 0.745 -2.263 2.612 Atomic orbital electron populations 1.86658 1.17511 1.80397 1.50269 1.25296 0.84153 1.12574 0.97496 0.93851 0.90099 0.71202 0.77347 1.20436 0.98838 0.92657 0.97308 1.21101 1.00331 1.02368 0.91145 1.17801 0.96244 0.88499 0.85522 1.91605 1.84100 1.77608 1.56936 1.19815 1.06374 0.92303 0.96630 1.18018 0.78258 0.83018 0.85856 1.90878 1.46397 1.66793 1.39696 1.45429 1.63099 1.05176 1.20535 1.21974 0.97170 0.93543 0.86495 0.88914 1.23627 0.99449 0.95137 0.99828 1.21692 0.98783 0.89576 0.98570 0.86385 1.19908 0.95468 0.94959 0.94711 1.21391 0.98794 0.97709 0.93631 1.21307 0.97744 0.91151 1.01596 1.21040 1.03531 0.90607 0.92887 1.98403 1.96936 1.35333 1.72811 1.20993 1.00364 0.91575 0.94292 1.98405 1.74562 1.44289 1.86017 1.21174 0.99503 0.90270 1.00768 1.23416 0.95743 0.92297 1.04625 1.21349 0.95865 1.02392 0.89880 1.17358 0.99184 0.89005 0.86057 1.91576 1.84431 1.78164 1.56430 0.76040 0.84942 1.22215 1.19711 0.81279 0.74512 0.91123 0.87778 0.82062 0.82689 0.82640 0.87374 0.88909 0.80052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.46 12.88 -148.98 -1.92 -1.46 16 2 C -0.09 0.37 2.44 71.24 0.17 0.54 16 3 Si 0.77 -4.32 30.23 68.60 2.07 -2.25 16 4 C -0.09 0.38 5.27 -19.78 -0.10 0.27 16 5 C -0.13 0.48 8.62 22.28 0.19 0.67 16 6 C 0.14 0.14 7.28 22.67 0.17 0.30 16 7 F -0.12 -0.88 15.55 44.97 0.70 -0.18 16 8 C -0.15 0.22 5.88 -20.06 -0.12 0.10 16 9 C 0.56 0.78 7.77 86.74 0.67 1.45 16 10 O -0.56 -5.98 14.94 -3.94 -0.06 -6.04 16 11 N -0.69 4.36 5.21 -442.76 -2.31 2.05 16 12 C 0.11 -0.73 4.33 45.58 0.20 -0.53 16 13 H 0.09 -0.18 7.46 -2.39 -0.02 -0.20 16 14 C -0.14 1.09 7.27 31.18 0.23 1.32 16 15 C -0.07 0.69 3.85 -11.02 -0.04 0.65 16 16 H 0.12 -1.52 8.09 -2.39 -0.02 -1.54 16 17 C -0.05 0.31 5.29 -19.87 -0.11 0.21 16 18 C -0.10 0.60 8.55 22.27 0.19 0.79 16 19 C -0.10 0.27 9.83 22.29 0.22 0.49 16 20 C -0.05 -0.08 6.32 22.34 0.14 0.06 16 21 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.32 16 22 C -0.04 -0.06 6.32 22.35 0.14 0.08 16 23 Cl -0.06 -0.21 27.96 -2.72 -0.08 -0.28 16 24 C -0.10 0.33 9.49 22.29 0.21 0.54 16 25 C -0.12 1.32 7.29 31.12 0.23 1.54 16 26 C -0.08 0.50 9.51 22.57 0.21 0.72 16 27 C 0.10 -0.39 7.23 22.33 0.16 -0.23 16 28 F -0.13 0.11 16.73 44.97 0.75 0.86 16 29 H 0.39 -2.78 8.70 -74.06 -0.64 -3.42 16 30 H 0.13 -0.71 7.89 -2.38 -0.02 -0.73 16 31 H -0.29 -0.66 7.11 99.48 0.71 0.04 16 32 H -0.27 0.77 6.68 99.48 0.66 1.43 16 33 H 0.17 -1.09 4.83 -2.91 -0.01 -1.11 16 34 H 0.42 -5.34 6.73 -92.71 -0.62 -5.96 16 35 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.10 -0.90 6.38 -2.39 -0.02 -0.91 16 37 H 0.16 -1.74 6.72 -2.91 -0.02 -1.76 16 38 H 0.16 -0.88 8.06 -2.91 -0.02 -0.90 16 39 H 0.16 -1.06 8.05 -2.91 -0.02 -1.08 16 40 H 0.11 -1.21 7.66 -2.38 -0.02 -1.23 16 41 H 0.09 -1.14 8.14 -2.39 -0.02 -1.15 16 42 H 0.18 -2.49 6.41 -2.91 -0.02 -2.51 16 Total: 0.00 -21.80 391.06 1.73 -20.07 By element: Atomic # 1 Polarization: -21.30 SS G_CDS: -0.12 Total: -21.43 kcal Atomic # 6 Polarization: 6.22 SS G_CDS: 2.77 Total: 8.99 kcal Atomic # 7 Polarization: 4.36 SS G_CDS: -2.31 Total: 2.05 kcal Atomic # 8 Polarization: -5.53 SS G_CDS: -1.98 Total: -7.50 kcal Atomic # 9 Polarization: -0.78 SS G_CDS: 1.45 Total: 0.68 kcal Atomic # 14 Polarization: -4.32 SS G_CDS: 2.07 Total: -2.25 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -0.15 Total: -0.60 kcal Total: -21.80 1.73 -20.07 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.660 kcal (2) G-P(sol) polarization free energy of solvation -21.798 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.458 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.068 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds