Wall clock time and date at job start Mon Mar 8 2021 04:35:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42910 * 1 3 3 C 1.35652 * 116.99823 * 2 1 4 4 C 1.40134 * 120.14669 * 180.02562 * 3 2 1 5 5 C 1.47537 * 120.19104 * 0.02562 * 4 3 2 6 6 O 1.21585 * 120.00138 * 359.71661 * 5 4 3 7 7 N 1.34782 * 119.99657 * 179.72511 * 5 4 3 8 8 C 1.46505 * 119.99476 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.85237 * 336.19353 * 8 7 5 10 10 C 1.53960 * 113.53368 * 107.50415 * 8 7 5 11 11 C 1.53784 * 87.02117 * 89.18641 * 10 8 7 12 12 H 1.08997 * 113.61150 * 270.76980 * 11 10 8 13 13 C 1.50700 * 113.61670 * 139.95081 * 11 10 8 14 14 C 1.38203 * 119.98334 * 140.86351 * 13 11 10 15 15 C 1.38341 * 120.00146 * 179.97438 * 14 13 11 16 16 Cl 1.73592 * 120.02059 * 180.02562 * 15 14 13 17 17 C 1.38446 * 119.96098 * 0.02562 * 15 14 13 18 18 Cl 1.73605 * 120.02033 * 180.02562 * 17 15 14 19 19 C 1.38351 * 119.96236 * 359.97438 * 17 15 14 20 20 C 1.38202 * 119.99776 * 0.26189 * 19 17 15 21 21 C 1.53784 * 87.17315 * 25.35917 * 11 10 8 22 22 C 1.39714 * 119.61836 * 179.72052 * 4 3 2 23 23 C 1.37785 * 119.90141 * 0.25466 * 22 4 3 24 24 C 1.50704 * 119.84443 * 179.97438 * 23 22 4 25 25 O 1.42905 * 109.46855 * 65.00292 * 24 23 22 26 26 Si 1.86306 * 109.46917 * 184.99957 * 24 23 22 27 27 C 1.38542 * 120.30627 * 0.02562 * 23 22 4 28 28 C 1.38054 * 120.39138 * 359.97438 * 27 23 22 29 29 H 1.09005 * 109.46569 * 299.99833 * 1 2 3 30 30 H 1.08998 * 109.47302 * 59.99832 * 1 2 3 31 31 H 1.08998 * 109.46682 * 180.02562 * 1 2 3 32 32 H 0.96996 * 120.00659 * 359.97438 * 7 5 4 33 33 H 1.08994 * 113.66499 * 334.65820 * 10 8 7 34 34 H 1.09005 * 113.61007 * 203.70323 * 10 8 7 35 35 H 1.08003 * 119.99894 * 359.95319 * 14 13 11 36 36 H 1.08002 * 119.99760 * 179.97438 * 19 17 15 37 37 H 1.08002 * 119.97779 * 179.72249 * 20 19 17 38 38 H 1.08994 * 113.61735 * 89.15803 * 21 11 10 39 39 H 1.08998 * 113.61514 * 219.98084 * 21 11 10 40 40 H 1.07992 * 120.04750 * 180.22959 * 22 4 3 41 41 H 1.08990 * 109.47620 * 304.99981 * 24 23 22 42 42 H 0.96703 * 113.99793 * 179.97438 * 25 24 23 43 43 H 1.48502 * 109.99662 * 178.68451 * 26 24 23 44 44 H 1.48494 * 110.00043 * 300.00084 * 26 24 23 45 45 H 1.07996 * 119.80783 * 180.02562 * 27 23 22 46 46 H 1.08001 * 119.96464 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4441 1.2857 -0.0005 5 6 4.2550 0.0531 -0.0017 6 8 3.7095 -1.0335 0.0030 7 7 5.6005 0.1317 -0.0078 8 6 6.4057 -1.0923 -0.0084 9 1 5.8724 -1.9500 0.4015 10 6 7.0923 -1.3758 -1.3569 11 6 8.2733 -0.5370 -0.8407 12 1 8.1862 0.5256 -1.0673 13 6 9.6213 -1.1043 -1.2044 14 6 10.6498 -0.2583 -1.5737 15 6 11.8876 -0.7786 -1.9071 16 17 13.1800 0.2837 -2.3703 17 6 12.0948 -2.1469 -1.8711 18 17 13.6476 -2.8015 -2.2886 19 6 11.0641 -2.9924 -1.5013 20 6 9.8268 -2.4713 -1.1732 21 6 7.8138 -0.9036 0.5804 22 6 4.0669 2.5363 -0.0065 23 6 3.3038 3.6836 -0.0064 24 6 3.9769 5.0320 -0.0122 25 8 4.6945 5.2008 -1.2365 26 14 2.6892 6.3694 0.1424 27 6 1.9207 3.6033 0.0000 28 6 1.2925 2.3740 0.0059 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3632 -1.0277 0.0005 32 1 6.0358 0.9985 -0.0118 33 1 6.5808 -0.9309 -2.2103 34 1 7.3371 -2.4270 -1.5097 35 1 10.4872 0.8091 -1.6022 36 1 11.2250 -4.0600 -1.4734 37 1 9.0212 -3.1319 -0.8888 38 1 8.2561 -1.8253 0.9582 39 1 7.8852 -0.0783 1.2888 40 1 5.1447 2.6037 -0.0107 41 1 4.6697 5.0959 0.8268 42 1 5.1533 6.0489 -1.3096 43 1 3.3426 7.7027 0.1698 44 1 1.7384 6.2931 -0.9957 45 1 1.3305 4.5077 -0.0004 46 1 0.2139 2.3195 0.0105 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:35:46 Heat of formation + Delta-G solvation = -24.189829 kcal Electronic energy + Delta-G solvation = -32692.185405 eV Core-core repulsion = 27987.757686 eV Total energy + Delta-G solvation = -4704.427719 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.073 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -41.92537 -41.29925 -40.16577 -39.11974 -38.90980 -37.57618 -37.43165 -37.28597 -34.64433 -32.72535 -32.11552 -31.92938 -31.28619 -28.53344 -26.69511 -26.52384 -26.09992 -25.08959 -24.07761 -23.04260 -22.35137 -21.48826 -20.23852 -19.39006 -18.66263 -18.50271 -18.10937 -17.63160 -17.17013 -16.85652 -16.76054 -16.56887 -16.20236 -15.95296 -15.86325 -15.67025 -15.52353 -15.21421 -15.12452 -14.82563 -14.66691 -14.34775 -14.02694 -13.83908 -13.79920 -13.54479 -13.48843 -13.33903 -12.98590 -12.95289 -12.91985 -12.49045 -12.40853 -12.38121 -12.34886 -12.00817 -11.96144 -11.82946 -11.73752 -11.57820 -11.26482 -10.96676 -10.44424 -10.26214 -10.01492 -9.99098 -9.60598 -9.27637 -4.90020 -0.25969 -0.13833 0.05541 0.22664 0.79117 1.18654 1.32898 1.62128 1.76578 1.97702 2.07059 2.27682 2.34571 2.65925 3.38287 3.42657 3.52158 3.55537 3.65917 3.68982 3.71309 3.83197 3.92804 3.99862 4.05312 4.08995 4.16453 4.18833 4.30384 4.35133 4.37134 4.38004 4.55402 4.63275 4.67303 4.69843 4.74016 4.77884 4.84508 4.88832 4.93575 4.96490 5.02551 5.07478 5.10236 5.16886 5.30911 5.38908 5.56089 5.58071 5.63161 6.30485 6.52463 6.63651 7.22822 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.311 6.311 3 C 0.171 3.829 4 C -0.197 4.197 5 C 0.561 3.439 6 O -0.562 6.562 7 N -0.700 5.700 8 C 0.115 3.885 9 H 0.088 0.912 10 C -0.143 4.143 11 C -0.066 4.066 12 H 0.114 0.886 13 C -0.050 4.050 14 C -0.099 4.099 15 C -0.044 4.044 16 Cl -0.061 7.061 17 C -0.053 4.053 18 Cl -0.062 7.062 19 C -0.098 4.098 20 C -0.098 4.098 21 C -0.122 4.122 22 C -0.015 4.015 23 C -0.129 4.129 24 C -0.074 4.074 25 O -0.557 6.557 26 Si 0.754 3.246 27 C -0.047 4.047 28 C -0.213 4.213 29 H 0.076 0.924 30 H 0.069 0.931 31 H 0.108 0.892 32 H 0.412 0.588 33 H 0.065 0.935 34 H 0.104 0.896 35 H 0.155 0.845 36 H 0.157 0.843 37 H 0.161 0.839 38 H 0.108 0.892 39 H 0.090 0.910 40 H 0.154 0.846 41 H 0.104 0.896 42 H 0.396 0.604 43 H -0.289 1.289 44 H -0.298 1.298 45 H 0.152 0.848 46 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.546 4.639 4.564 7.411 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.223 6.223 3 C 0.123 3.877 4 C -0.201 4.201 5 C 0.350 3.650 6 O -0.441 6.441 7 N -0.353 5.353 8 C 0.009 3.991 9 H 0.107 0.893 10 C -0.181 4.181 11 C -0.084 4.084 12 H 0.132 0.868 13 C -0.050 4.050 14 C -0.118 4.118 15 C -0.071 4.071 16 Cl -0.032 7.032 17 C -0.080 4.080 18 Cl -0.033 7.033 19 C -0.117 4.117 20 C -0.116 4.116 21 C -0.160 4.160 22 C -0.034 4.034 23 C -0.130 4.130 24 C -0.183 4.183 25 O -0.367 6.367 26 Si 0.660 3.340 27 C -0.064 4.064 28 C -0.231 4.231 29 H 0.094 0.906 30 H 0.088 0.912 31 H 0.127 0.873 32 H 0.250 0.750 33 H 0.084 0.916 34 H 0.122 0.878 35 H 0.173 0.827 36 H 0.174 0.826 37 H 0.178 0.822 38 H 0.127 0.873 39 H 0.109 0.891 40 H 0.172 0.828 41 H 0.121 0.879 42 H 0.246 0.754 43 H -0.216 1.216 44 H -0.226 1.226 45 H 0.169 0.831 46 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -4.177 3.799 4.030 6.937 hybrid contribution 1.337 0.774 -1.160 1.932 sum -2.840 4.573 2.869 6.100 Atomic orbital electron populations 1.23452 0.76567 1.05508 1.02805 1.86333 1.23158 1.26249 1.86558 1.19398 0.91415 0.85484 0.91438 1.19414 0.91133 0.94072 1.15498 1.18214 0.82629 0.88466 0.75678 1.90810 1.72452 1.30221 1.50593 1.45467 1.04864 1.09958 1.74974 1.21905 0.91603 0.87934 0.97616 0.89350 1.23623 0.95587 1.01601 0.97300 1.21642 0.88970 1.00711 0.97119 0.86786 1.19897 0.95106 0.93191 0.96821 1.21153 0.89781 1.01861 0.98958 1.20968 0.91690 0.89547 1.04896 1.98401 1.49221 1.64925 1.90613 1.21035 0.89246 0.92068 1.05684 1.98401 1.27198 1.85893 1.91849 1.21301 0.91377 1.00841 0.98152 1.21384 0.96826 0.95252 0.98098 1.23401 0.92668 1.04292 0.95607 1.21123 1.00802 0.89094 0.92366 1.19279 0.93358 0.94371 1.05954 1.24826 1.03284 1.00598 0.89610 1.86550 1.68830 1.42792 1.38523 0.94280 0.78255 0.74373 0.87082 1.21259 0.93905 0.97969 0.93296 1.21438 1.01765 0.90851 1.09081 0.90592 0.91226 0.87325 0.75042 0.91637 0.87780 0.82749 0.82577 0.82162 0.87334 0.89108 0.82825 0.87869 0.75373 1.21587 1.22581 0.83118 0.82050 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.31 -2.63 8.57 -68.75 -0.59 -3.22 16 3 C 0.17 0.97 6.70 22.84 0.15 1.12 16 4 C -0.20 -0.98 5.89 -20.01 -0.12 -1.10 16 5 C 0.56 4.24 7.76 86.70 0.67 4.91 16 6 O -0.56 -9.09 14.76 16.94 0.25 -8.84 16 7 N -0.70 0.41 5.21 -442.89 -2.31 -1.89 16 8 C 0.11 -0.22 4.33 45.58 0.20 -0.02 16 9 H 0.09 0.23 7.46 -2.39 -0.02 0.22 16 10 C -0.14 0.52 7.27 31.18 0.23 0.75 16 11 C -0.07 0.44 3.85 -11.01 -0.04 0.40 16 12 H 0.11 -1.00 8.09 -2.39 -0.02 -1.02 16 13 C -0.05 0.19 5.29 -19.87 -0.11 0.09 16 14 C -0.10 0.14 9.49 22.29 0.21 0.36 16 15 C -0.04 -0.11 6.32 22.34 0.14 0.03 16 16 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 17 C -0.05 -0.15 6.32 22.35 0.14 0.00 16 18 Cl -0.06 -0.29 27.96 -2.72 -0.08 -0.37 16 19 C -0.10 0.14 9.83 22.29 0.22 0.35 16 20 C -0.10 0.41 8.54 22.27 0.19 0.60 16 21 C -0.12 0.88 7.29 31.12 0.23 1.10 16 22 C -0.02 0.01 9.16 22.52 0.21 0.22 16 23 C -0.13 0.19 5.38 -19.90 -0.11 0.09 16 24 C -0.07 0.38 2.79 71.24 0.20 0.58 16 25 O -0.56 1.39 12.81 -148.98 -1.91 -0.52 16 26 Si 0.75 -3.97 29.83 68.60 2.05 -1.93 16 27 C -0.05 0.09 8.65 22.30 0.19 0.28 16 28 C -0.21 0.04 9.03 22.34 0.20 0.25 16 29 H 0.08 -0.38 7.65 -2.38 -0.02 -0.40 16 30 H 0.07 -0.28 7.67 -2.39 -0.02 -0.30 16 31 H 0.11 -0.29 8.14 -2.39 -0.02 -0.31 16 32 H 0.41 -2.63 6.73 -92.71 -0.62 -3.25 16 33 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.10 -0.54 6.38 -2.38 -0.02 -0.56 16 35 H 0.15 -0.73 8.05 -2.91 -0.02 -0.75 16 36 H 0.16 -0.71 8.06 -2.91 -0.02 -0.73 16 37 H 0.16 -1.37 6.72 -2.91 -0.02 -1.39 16 38 H 0.11 -0.90 7.66 -2.39 -0.02 -0.92 16 39 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 40 H 0.15 -0.95 6.40 -2.91 -0.02 -0.96 16 41 H 0.10 -1.03 7.96 -2.39 -0.02 -1.05 16 42 H 0.40 -3.94 8.74 -74.06 -0.65 -4.58 16 43 H -0.29 0.13 7.11 99.48 0.71 0.84 16 44 H -0.30 -0.60 7.04 99.48 0.70 0.10 16 45 H 0.15 -0.93 4.84 -2.91 -0.01 -0.94 16 46 H 0.16 -0.87 6.30 -2.91 -0.02 -0.89 16 Total: 0.00 -24.86 408.11 1.09 -23.77 By element: Atomic # 1 Polarization: -17.60 SS G_CDS: -0.17 Total: -17.76 kcal Atomic # 6 Polarization: 7.18 SS G_CDS: 3.92 Total: 11.10 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -2.31 Total: -1.89 kcal Atomic # 8 Polarization: -10.34 SS G_CDS: -2.25 Total: -12.58 kcal Atomic # 14 Polarization: -3.97 SS G_CDS: 2.05 Total: -1.93 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -0.15 Total: -0.70 kcal Total: -24.86 1.09 -23.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.423 kcal (2) G-P(sol) polarization free energy of solvation -24.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.094 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.766 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds