Wall clock time and date at job start Mon Mar 8 2021 04:35:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86298 * 109.46966 * 2 1 4 4 C 1.50701 * 109.47186 * 240.00296 * 2 1 3 5 5 C 1.38638 * 119.94155 * 74.99548 * 4 2 1 6 6 F 1.35099 * 119.87759 * 0.02562 * 5 4 2 7 7 C 1.38679 * 120.23785 * 179.97438 * 5 4 2 8 8 C 1.37813 * 120.12061 * 0.02562 * 7 5 4 9 9 C 1.39671 * 119.87595 * 359.97438 * 8 7 5 10 10 C 1.47733 * 120.11485 * 180.02562 * 9 8 7 11 11 O 1.21568 * 119.99970 * 180.02562 * 10 9 8 12 12 N 1.34779 * 119.99750 * 359.97438 * 10 9 8 13 13 C 1.46493 * 119.99751 * 180.02562 * 12 10 9 14 14 H 1.08998 * 112.85710 * 336.20091 * 13 12 10 15 15 C 1.53794 * 113.69003 * 107.46699 * 13 12 10 16 16 C 1.53777 * 87.07895 * 89.12582 * 15 13 12 17 17 H 1.09001 * 113.69423 * 270.87277 * 16 15 13 18 18 C 1.50702 * 113.61332 * 139.98029 * 16 15 13 19 19 C 1.38230 * 119.98265 * 322.75627 * 18 16 15 20 20 C 1.38247 * 120.03678 * 180.24999 * 19 18 16 21 21 C 1.38297 * 120.00201 * 359.74553 * 20 19 18 22 22 Cl 1.73601 * 120.02181 * 179.97438 * 21 20 19 23 23 C 1.38486 * 119.96158 * 0.02562 * 21 20 19 24 24 Cl 1.73605 * 120.02010 * 180.02562 * 23 21 20 25 25 C 1.38247 * 119.98039 * 142.49818 * 18 16 15 26 26 C 1.53780 * 87.08394 * 25.43525 * 16 15 13 27 27 C 1.37860 * 119.93961 * 255.31905 * 4 2 1 28 28 H 0.96702 * 114.00141 * 59.99895 * 1 2 3 29 29 H 1.08995 * 109.47443 * 119.99912 * 2 1 3 30 30 H 1.48500 * 110.00051 * 59.99991 * 3 2 1 31 31 H 1.48496 * 110.00275 * 181.32005 * 3 2 1 32 32 H 1.08007 * 119.93768 * 180.02562 * 7 5 4 33 33 H 1.07995 * 120.06083 * 180.02562 * 8 7 5 34 34 H 0.97002 * 120.00051 * 359.97438 * 12 10 9 35 35 H 1.08996 * 113.61023 * 334.57802 * 15 13 12 36 36 H 1.09002 * 113.61159 * 203.67267 * 15 13 12 37 37 H 1.07994 * 119.97747 * 0.02611 * 19 18 16 38 38 H 1.08004 * 119.99716 * 179.77351 * 20 19 18 39 39 H 1.08002 * 120.00316 * 0.03238 * 25 18 16 40 40 H 1.09001 * 113.61979 * 89.11146 * 26 16 15 41 41 H 1.09004 * 113.61538 * 219.93234 * 26 16 15 42 42 H 1.07999 * 120.06407 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.8687 -0.0834 -2.4654 6 9 1.3578 1.1635 -2.5620 7 6 2.3297 -0.7312 -3.6017 8 6 2.8524 -2.0029 -3.5087 9 6 2.9178 -2.6391 -2.2670 10 6 3.4776 -4.0022 -2.1611 11 8 3.5331 -4.5542 -1.0794 12 7 3.9258 -4.6341 -3.2640 13 6 4.4804 -5.9860 -3.1590 14 1 4.8578 -6.2126 -2.1619 15 6 3.5609 -7.0773 -3.7324 16 6 4.2541 -6.8405 -5.0845 17 1 3.7794 -6.0691 -5.6909 18 6 4.5232 -8.1074 -5.8550 19 6 4.8989 -9.2567 -5.1851 20 6 5.1511 -10.4182 -5.8912 21 6 5.0224 -10.4321 -7.2681 22 17 5.3396 -11.8902 -8.1553 23 6 4.6414 -9.2820 -7.9388 24 17 4.4787 -9.2980 -9.6671 25 6 4.3890 -8.1210 -7.2308 26 6 5.4672 -6.3362 -4.2853 27 6 2.4461 -1.9850 -1.1271 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5138 0.8899 30 1 1.5614 2.4679 1.2085 31 1 3.5345 1.7704 -0.0321 32 1 2.2791 -0.2380 -4.5613 33 1 3.2115 -2.5063 -4.3941 34 1 3.8805 -4.1941 -4.1272 35 1 2.5055 -6.8050 -3.7291 36 1 3.7451 -8.0671 -3.3147 37 1 4.9990 -9.2462 -4.1098 38 1 5.4482 -11.3148 -5.3674 39 1 4.0918 -7.2237 -7.7533 40 1 6.1725 -7.1234 -4.0188 41 1 5.9516 -5.4665 -4.7293 42 1 2.4900 -2.4745 -0.1654 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:35:52 Heat of formation + Delta-G solvation = -36.952935 kcal Electronic energy + Delta-G solvation = -30268.235180 eV Core-core repulsion = 25568.019846 eV Total energy + Delta-G solvation = -4700.215334 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.048 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -50.34530 -41.83174 -40.96288 -39.86911 -38.94079 -37.69436 -37.56180 -37.42448 -34.78941 -32.88363 -32.24329 -31.95219 -31.22243 -27.07153 -26.68778 -26.48525 -24.91648 -24.03766 -23.51549 -22.73246 -21.64751 -20.28063 -19.24565 -18.74855 -18.43416 -17.87108 -17.80900 -17.18764 -17.00224 -16.87684 -16.55672 -16.24713 -16.14665 -15.66131 -15.58830 -15.43943 -15.18298 -15.05290 -14.89660 -14.53772 -14.43758 -14.22213 -13.99601 -13.79090 -13.55095 -13.42206 -13.32217 -12.94216 -12.92299 -12.90413 -12.49268 -12.41056 -12.35499 -11.98866 -11.95036 -11.82876 -11.57240 -11.27528 -11.22665 -10.68882 -10.24063 -10.11373 -9.98387 -9.83333 -9.59337 -4.92423 -0.51634 -0.12506 0.00790 0.06967 0.80699 1.15186 1.20504 1.49529 1.60135 1.85130 1.97834 2.35855 2.54952 2.93864 3.26579 3.43092 3.51147 3.54315 3.55162 3.60760 3.68963 3.71298 3.92850 3.95471 4.01060 4.09365 4.10924 4.20213 4.27200 4.38984 4.60181 4.64892 4.69314 4.75730 4.78994 4.83969 4.88317 4.90110 4.96457 5.00199 5.03465 5.07908 5.09246 5.16011 5.37108 5.58112 5.59777 5.62514 6.42414 6.57585 7.09885 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.074 4.074 3 Si 0.745 3.255 4 C -0.166 4.166 5 C 0.121 3.879 6 F -0.100 7.100 7 C -0.141 4.141 8 C -0.040 4.040 9 C -0.156 4.156 10 C 0.562 3.438 11 O -0.578 6.578 12 N -0.691 5.691 13 C 0.112 3.888 14 H 0.087 0.913 15 C -0.143 4.143 16 C -0.065 4.065 17 H 0.122 0.878 18 C -0.050 4.050 19 C -0.099 4.099 20 C -0.100 4.100 21 C -0.053 4.053 22 Cl -0.064 7.064 23 C -0.044 4.044 24 Cl -0.061 7.061 25 C -0.097 4.097 26 C -0.123 4.123 27 C -0.032 4.032 28 H 0.392 0.608 29 H 0.112 0.888 30 H -0.288 1.288 31 H -0.285 1.285 32 H 0.183 0.817 33 H 0.178 0.822 34 H 0.418 0.582 35 H 0.070 0.930 36 H 0.101 0.899 37 H 0.160 0.840 38 H 0.154 0.846 39 H 0.159 0.841 40 H 0.105 0.895 41 H 0.093 0.907 42 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.747 3.390 -5.264 6.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.183 4.183 3 Si 0.650 3.350 4 C -0.168 4.168 5 C 0.101 3.899 6 F -0.079 7.079 7 C -0.160 4.160 8 C -0.059 4.059 9 C -0.159 4.159 10 C 0.350 3.650 11 O -0.459 6.459 12 N -0.343 5.343 13 C 0.007 3.993 14 H 0.105 0.895 15 C -0.181 4.181 16 C -0.084 4.084 17 H 0.140 0.860 18 C -0.051 4.051 19 C -0.117 4.117 20 C -0.119 4.119 21 C -0.081 4.081 22 Cl -0.035 7.035 23 C -0.072 4.072 24 Cl -0.032 7.032 25 C -0.115 4.115 26 C -0.161 4.161 27 C -0.052 4.052 28 H 0.242 0.758 29 H 0.129 0.871 30 H -0.215 1.215 31 H -0.212 1.212 32 H 0.200 0.800 33 H 0.195 0.805 34 H 0.257 0.743 35 H 0.089 0.911 36 H 0.120 0.880 37 H 0.177 0.823 38 H 0.172 0.828 39 H 0.176 0.824 40 H 0.123 0.877 41 H 0.112 0.888 42 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.358 3.179 -3.804 5.140 hybrid contribution -0.048 -0.733 -0.128 0.746 sum 1.310 2.446 -3.932 4.812 Atomic orbital electron populations 1.86523 1.16831 1.81951 1.50418 1.25045 0.85455 1.10953 0.96893 0.93899 0.78242 0.76929 0.85931 1.20275 1.04862 0.96400 0.95238 1.17915 0.97229 0.80507 0.94222 1.91190 1.84201 1.37710 1.94763 1.21484 0.99938 0.95694 0.98854 1.21568 0.94002 0.93670 0.96636 1.19981 1.05594 0.94915 0.95417 1.18368 0.77077 0.85519 0.84012 1.90803 1.57475 1.68392 1.29208 1.45416 1.62132 1.16508 1.10251 1.21901 0.95536 0.81480 1.00403 0.89460 1.23597 0.99731 0.99799 0.95009 1.21684 0.98051 0.94131 0.94487 0.86012 1.19917 0.96867 0.95967 0.92310 1.21389 0.97525 0.91008 1.01750 1.21293 0.99329 1.00727 0.90535 1.21038 1.05823 0.87750 0.93475 1.98403 1.93971 1.35333 1.75807 1.20996 1.05372 0.95119 0.85710 1.98405 1.96153 1.98756 1.09872 1.21182 0.99703 0.96672 0.93989 1.23408 0.95843 1.02687 0.94187 1.21000 0.92891 0.92118 0.99143 0.75780 0.87088 1.21526 1.21153 0.80012 0.80476 0.74336 0.91079 0.88021 0.82270 0.82818 0.82384 0.87710 0.88830 0.85320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.26 12.88 -148.98 -1.92 -3.18 16 2 C -0.07 -0.11 2.80 71.24 0.20 0.09 16 3 Si 0.75 0.72 29.57 68.60 2.03 2.75 16 4 C -0.17 0.02 4.78 -19.86 -0.09 -0.07 16 5 C 0.12 -0.55 6.63 22.47 0.15 -0.40 16 6 F -0.10 0.61 13.46 44.97 0.61 1.22 16 7 C -0.14 1.32 10.01 22.27 0.22 1.55 16 8 C -0.04 0.39 9.54 22.52 0.21 0.60 16 9 C -0.16 0.27 5.87 -20.09 -0.12 0.16 16 10 C 0.56 0.72 7.77 86.75 0.67 1.39 16 11 O -0.58 -6.37 15.94 -3.93 -0.06 -6.44 16 12 N -0.69 4.67 5.22 -443.00 -2.31 2.36 16 13 C 0.11 -0.71 4.32 45.52 0.20 -0.51 16 14 H 0.09 -0.10 7.46 -2.39 -0.02 -0.12 16 15 C -0.14 1.10 7.25 31.12 0.23 1.33 16 16 C -0.07 0.70 3.86 -11.01 -0.04 0.66 16 17 H 0.12 -1.72 8.09 -2.39 -0.02 -1.74 16 18 C -0.05 0.34 5.29 -19.86 -0.11 0.23 16 19 C -0.10 0.61 8.62 22.27 0.19 0.80 16 20 C -0.10 0.28 9.83 22.29 0.22 0.50 16 21 C -0.05 -0.07 6.32 22.34 0.14 0.07 16 22 Cl -0.06 -0.23 27.96 -2.72 -0.08 -0.31 16 23 C -0.04 -0.03 6.32 22.35 0.14 0.11 16 24 Cl -0.06 -0.16 27.96 -2.72 -0.08 -0.24 16 25 C -0.10 0.40 9.49 22.29 0.21 0.61 16 26 C -0.12 1.33 7.29 31.12 0.23 1.56 16 27 C -0.03 -0.07 9.21 22.52 0.21 0.14 16 28 H 0.39 -2.17 8.41 -74.06 -0.62 -2.79 16 29 H 0.11 0.29 7.77 -2.39 -0.02 0.27 16 30 H -0.29 -2.18 7.11 99.48 0.71 -1.48 16 31 H -0.29 -1.74 7.11 99.48 0.71 -1.03 16 32 H 0.18 -2.82 8.06 -2.91 -0.02 -2.84 16 33 H 0.18 -3.18 6.40 -2.91 -0.02 -3.20 16 34 H 0.42 -5.88 6.73 -92.71 -0.62 -6.51 16 35 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 36 H 0.10 -0.85 6.29 -2.39 -0.02 -0.86 16 37 H 0.16 -1.66 6.64 -2.91 -0.02 -1.67 16 38 H 0.15 -0.85 8.06 -2.91 -0.02 -0.87 16 39 H 0.16 -1.27 8.05 -2.91 -0.02 -1.30 16 40 H 0.10 -1.13 7.73 -2.39 -0.02 -1.15 16 41 H 0.09 -1.18 8.14 -2.39 -0.02 -1.20 16 42 H 0.13 0.65 7.59 -2.91 -0.02 0.63 16 Total: 0.00 -22.25 385.99 0.96 -21.29 By element: Atomic # 1 Polarization: -26.18 SS G_CDS: -0.09 Total: -26.27 kcal Atomic # 6 Polarization: 5.95 SS G_CDS: 2.86 Total: 8.82 kcal Atomic # 7 Polarization: 4.67 SS G_CDS: -2.31 Total: 2.36 kcal Atomic # 8 Polarization: -7.63 SS G_CDS: -1.98 Total: -9.61 kcal Atomic # 9 Polarization: 0.61 SS G_CDS: 0.61 Total: 1.22 kcal Atomic # 14 Polarization: 0.72 SS G_CDS: 2.03 Total: 2.75 kcal Atomic # 17 Polarization: -0.39 SS G_CDS: -0.15 Total: -0.55 kcal Total: -22.25 0.96 -21.29 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.664 kcal (2) G-P(sol) polarization free energy of solvation -22.249 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.912 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.960 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.289 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds