Wall clock time and date at job start Mon Mar 8 2021 04:35:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.47115 * 2 1 4 4 C 1.50693 * 109.47181 * 119.99757 * 2 1 3 5 5 C 1.35089 * 126.07820 * 254.97966 * 4 2 1 6 6 N 1.35042 * 107.98342 * 180.02562 * 5 4 2 7 7 C 1.46491 * 125.93356 * 179.97438 * 6 5 4 8 8 C 1.50702 * 109.46957 * 124.99666 * 7 6 5 9 9 O 1.21283 * 120.00262 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99928 * 179.72354 * 8 7 6 11 11 C 1.46499 * 120.00199 * 180.27479 * 10 8 7 12 12 H 1.09001 * 112.84905 * 23.81116 * 11 10 8 13 13 C 1.53781 * 113.61433 * 155.00089 * 11 10 8 14 14 C 1.53781 * 87.07867 * 89.12078 * 13 11 10 15 15 H 1.08994 * 113.61226 * 270.88038 * 14 13 11 16 16 C 1.50701 * 113.61551 * 139.98153 * 14 13 11 17 17 C 1.38206 * 119.98217 * 119.99767 * 16 14 13 18 18 C 1.38347 * 119.99958 * 180.02562 * 17 16 14 19 19 Cl 1.73600 * 120.01934 * 179.97438 * 18 17 16 20 20 C 1.38448 * 119.96118 * 359.97438 * 18 17 16 21 21 Cl 1.73607 * 120.01663 * 179.97438 * 20 18 17 22 22 C 1.38341 * 119.96139 * 0.02562 * 20 18 17 23 23 C 1.38201 * 120.00351 * 359.72392 * 22 20 18 24 24 C 1.53779 * 87.08432 * 25.43214 * 14 13 11 25 25 N 1.40071 * 108.13370 * 0.25987 * 6 5 4 26 26 C 1.31626 * 108.11060 * 359.55631 * 25 6 5 27 27 C 1.48420 * 126.03557 * 180.13106 * 26 25 6 28 28 C 1.39329 * 120.11489 * 145.08044 * 27 26 25 29 29 C 1.38019 * 119.87715 * 179.72491 * 28 27 26 30 30 C 1.38320 * 120.12138 * 0.57417 * 29 28 27 31 31 C 1.38319 * 120.23786 * 359.70409 * 30 29 28 32 32 C 1.38022 * 120.12194 * 359.97438 * 31 30 29 33 33 H 0.96700 * 113.99718 * 60.00249 * 1 2 3 34 34 H 1.09002 * 109.47121 * 240.00223 * 2 1 3 35 35 H 1.48496 * 110.00166 * 59.99737 * 3 2 1 36 36 H 1.48496 * 110.00277 * 181.31928 * 3 2 1 37 37 H 1.08002 * 126.00974 * 359.97438 * 5 4 2 38 38 H 1.09004 * 109.47166 * 4.99932 * 7 6 5 39 39 H 1.08994 * 109.47507 * 244.99638 * 7 6 5 40 40 H 0.97000 * 120.00317 * 0.28382 * 10 8 7 41 41 H 1.09007 * 113.61281 * 203.66562 * 13 11 10 42 42 H 1.08998 * 113.61888 * 334.48577 * 13 11 10 43 43 H 1.07992 * 119.99917 * 0.02562 * 17 16 14 44 44 H 1.08003 * 119.99653 * 180.02562 * 22 20 18 45 45 H 1.07997 * 119.98920 * 180.29784 * 23 22 20 46 46 H 1.09000 * 113.61513 * 220.01986 * 24 14 13 47 47 H 1.08999 * 113.61644 * 89.11386 * 24 14 13 48 48 H 1.07999 * 120.05905 * 0.02562 * 28 27 26 49 49 H 1.08000 * 119.94247 * 180.32218 * 29 28 27 50 50 H 1.07997 * 119.88375 * 179.71858 * 30 29 28 51 51 H 1.08006 * 119.93860 * 180.02562 * 31 30 29 52 52 H 1.08003 * 120.06062 * 180.02562 * 32 31 30 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 2.4633 -0.1249 2.3255 6 7 2.7892 -1.0989 3.2022 7 6 3.3953 -0.9009 4.5211 8 6 2.5421 -1.5650 5.5709 9 8 1.5278 -2.1469 5.2490 10 7 2.9093 -1.5175 6.8668 11 6 2.0830 -2.1682 7.8866 12 1 1.4674 -2.9720 7.4829 13 6 2.8638 -2.5657 9.1504 14 6 2.5335 -1.1675 9.6989 15 1 3.2714 -0.4098 9.4356 16 6 2.1835 -1.1611 11.1647 17 6 2.9426 -0.4227 12.0527 18 6 2.6220 -0.4170 13.3985 19 17 3.5755 0.5098 14.5146 20 6 1.5402 -1.1508 13.8547 21 17 1.1370 -1.1453 15.5433 22 6 0.7815 -1.8894 12.9643 23 6 1.1001 -1.8899 11.6195 24 6 1.3061 -1.1801 8.7726 25 7 2.4531 -2.3319 2.6288 26 6 1.9301 -2.1026 1.4429 27 6 1.4336 -3.1303 0.4941 28 6 0.3274 -2.8633 -0.3098 29 6 -0.1266 -3.8204 -1.1945 30 6 0.5071 -5.0472 -1.2754 31 6 1.6021 -5.3197 -0.4756 32 6 2.0686 -4.3674 0.4079 33 1 -0.3933 0.4417 -0.7651 34 1 1.7923 -0.5138 -0.8900 35 1 1.5615 2.4680 1.2084 36 1 3.5346 1.7704 -0.0321 37 1 2.6040 0.9356 2.4735 38 1 3.4660 0.1662 4.7320 39 1 4.3927 -1.3403 4.5323 40 1 3.7206 -1.0524 7.1243 41 1 2.4003 -3.3761 9.7132 42 1 3.9272 -2.7271 8.9741 43 1 3.7860 0.1498 11.6961 44 1 -0.0627 -2.4618 13.3195 45 1 0.5047 -2.4627 10.9240 46 1 1.1123 -0.2215 8.2914 47 1 0.4168 -1.6117 9.2319 48 1 -0.1708 -1.9073 -0.2443 49 1 -0.9808 -3.6126 -1.8219 50 1 0.1458 -5.7950 -1.9658 51 1 2.0936 -6.2791 -0.5430 52 1 2.9240 -4.5810 1.0317 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_12622748.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:35:56 Heat of formation + Delta-G solvation = 93.533651 kcal Electronic energy + Delta-G solvation = -38515.420358 eV Core-core repulsion = 33308.174223 eV Total energy + Delta-G solvation = -5207.246135 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 458.095 amu Computer time = 2.23 seconds Orbital eigenvalues (eV) -42.61644 -41.70100 -40.58091 -39.79755 -39.12945 -37.69140 -37.60483 -37.47318 -34.98655 -34.58342 -32.50368 -32.21985 -31.92005 -31.63561 -31.34888 -28.90683 -26.76844 -26.42327 -25.80099 -24.35917 -24.05740 -23.48755 -22.84371 -22.12549 -21.61168 -20.88030 -20.29652 -18.81478 -18.47698 -18.37297 -18.23143 -17.63297 -17.20352 -16.86296 -16.73713 -16.63248 -16.28660 -16.04762 -15.90755 -15.61831 -15.52147 -15.25969 -15.13568 -15.08092 -14.91718 -14.68876 -14.49192 -14.37036 -14.23425 -13.90205 -13.78415 -13.66354 -13.62152 -13.45945 -13.29143 -12.98607 -12.96773 -12.73733 -12.46625 -12.41231 -12.27090 -12.14953 -11.99521 -11.88758 -11.85309 -11.64041 -11.61930 -11.39404 -11.33360 -10.75913 -10.21779 -10.15202 -10.03518 -9.89200 -9.83004 -9.64751 -9.34972 -4.89691 -0.17849 0.01704 0.04363 0.49229 0.63345 0.76128 1.15637 1.18040 1.36096 1.38786 1.58616 1.77513 1.95699 2.01653 2.30371 2.89339 3.24248 3.36376 3.45184 3.46263 3.49932 3.60730 3.64227 3.76721 3.78587 3.86491 3.94357 3.99800 4.02831 4.04763 4.06233 4.14657 4.14808 4.27433 4.32783 4.35778 4.49487 4.56227 4.61428 4.63538 4.70699 4.75121 4.76607 4.81147 4.83354 4.91050 4.95693 4.98402 5.02463 5.07775 5.18602 5.26364 5.31327 5.52819 5.54075 5.57308 5.62906 5.63145 5.74164 6.07555 6.36372 6.46193 7.01450 7.07258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.046 4.046 3 Si 0.788 3.212 4 C -0.228 4.228 5 C 0.056 3.944 6 N -0.360 5.360 7 C 0.107 3.893 8 C 0.500 3.500 9 O -0.563 6.563 10 N -0.693 5.693 11 C 0.114 3.886 12 H 0.078 0.922 13 C -0.123 4.123 14 C -0.062 4.062 15 H 0.123 0.877 16 C -0.051 4.051 17 C -0.097 4.097 18 C -0.044 4.044 19 Cl -0.060 7.060 20 C -0.052 4.052 21 Cl -0.062 7.062 22 C -0.100 4.100 23 C -0.100 4.100 24 C -0.142 4.142 25 N -0.289 5.289 26 C 0.112 3.888 27 C -0.042 4.042 28 C -0.111 4.111 29 C -0.126 4.126 30 C -0.115 4.115 31 C -0.132 4.132 32 C -0.111 4.111 33 H 0.401 0.599 34 H 0.076 0.924 35 H -0.283 1.283 36 H -0.288 1.288 37 H 0.198 0.802 38 H 0.172 0.828 39 H 0.146 0.854 40 H 0.422 0.578 41 H 0.102 0.898 42 H 0.093 0.907 43 H 0.158 0.842 44 H 0.155 0.845 45 H 0.157 0.843 46 H 0.071 0.929 47 H 0.098 0.902 48 H 0.159 0.841 49 H 0.150 0.850 50 H 0.148 0.852 51 H 0.141 0.859 52 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.077 4.587 -4.954 7.420 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.155 4.155 3 Si 0.692 3.308 4 C -0.239 4.239 5 C -0.089 4.089 6 N -0.142 5.142 7 C -0.016 4.016 8 C 0.285 3.715 9 O -0.440 6.440 10 N -0.347 5.347 11 C 0.009 3.991 12 H 0.096 0.904 13 C -0.161 4.161 14 C -0.080 4.080 15 H 0.141 0.859 16 C -0.052 4.052 17 C -0.115 4.115 18 C -0.071 4.071 19 Cl -0.031 7.031 20 C -0.080 4.080 21 Cl -0.033 7.033 22 C -0.118 4.118 23 C -0.118 4.118 24 C -0.180 4.180 25 N -0.110 5.110 26 C -0.053 4.053 27 C -0.044 4.044 28 C -0.129 4.129 29 C -0.143 4.143 30 C -0.133 4.133 31 C -0.149 4.149 32 C -0.131 4.131 33 H 0.253 0.747 34 H 0.094 0.906 35 H -0.210 1.210 36 H -0.215 1.215 37 H 0.215 0.785 38 H 0.189 0.811 39 H 0.164 0.836 40 H 0.260 0.740 41 H 0.120 0.880 42 H 0.111 0.889 43 H 0.176 0.824 44 H 0.172 0.828 45 H 0.175 0.825 46 H 0.090 0.910 47 H 0.116 0.884 48 H 0.176 0.824 49 H 0.168 0.832 50 H 0.166 0.834 51 H 0.159 0.841 52 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 3.396 3.695 -2.909 5.801 hybrid contribution 0.231 0.103 0.747 0.789 sum 3.627 3.798 -2.161 5.679 Atomic orbital electron populations 1.86407 1.17887 1.81464 1.51343 1.24234 0.85253 1.11147 0.94915 0.93953 0.77387 0.73904 0.85581 1.19891 1.12486 0.92136 0.99407 1.22581 1.00268 0.95983 0.90051 1.48102 1.48389 1.03475 1.14187 1.22005 0.97223 1.06173 0.76236 1.20962 0.85903 0.80309 0.84331 1.90834 1.27655 1.43899 1.81631 1.45402 1.28283 1.56243 1.04754 1.21827 0.93817 0.95836 0.87658 0.90420 1.23391 1.02152 0.96647 0.93910 1.21652 0.98980 0.99266 0.88141 0.85892 1.19904 0.94253 0.95176 0.95823 1.21169 1.01121 0.99880 0.89358 1.20987 0.94928 0.98827 0.92369 1.98405 1.70759 1.71835 1.62051 1.21031 0.97916 1.02285 0.86739 1.98403 1.93207 1.97602 1.14123 1.21287 0.99683 0.98110 0.92754 1.21372 0.97000 0.98689 0.94703 1.23572 0.97641 1.00312 0.96478 1.77662 1.20664 1.03697 1.09020 1.21002 0.98374 0.93550 0.92407 1.18034 0.97631 0.92332 0.96362 1.22090 0.94712 1.01916 0.94228 1.21469 1.00725 0.93354 0.98801 1.21636 0.95164 0.97651 0.98840 1.21341 0.97693 0.99613 0.96297 1.21285 1.00027 0.92945 0.98805 0.74736 0.90577 1.21022 1.21493 0.78512 0.81067 0.83637 0.73972 0.87986 0.88891 0.82393 0.82777 0.82528 0.91032 0.88356 0.82427 0.83197 0.83448 0.84121 0.86877 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.22 10.08 -148.98 -1.50 -1.72 16 2 C -0.05 -0.06 2.00 71.23 0.14 0.09 16 3 Si 0.79 -3.06 30.78 68.60 2.11 -0.94 16 4 C -0.23 -1.96 5.37 -19.95 -0.11 -2.07 16 5 C 0.06 0.30 9.96 83.47 0.83 1.14 16 6 N -0.36 -2.49 3.39 -351.92 -1.19 -3.68 16 7 C 0.11 -0.41 6.98 85.64 0.60 0.19 16 8 C 0.50 1.04 7.86 87.66 0.69 1.73 16 9 O -0.56 -8.53 15.32 -3.04 -0.05 -8.58 16 10 N -0.69 4.17 5.26 -440.03 -2.32 1.85 16 11 C 0.11 -0.46 4.32 45.52 0.20 -0.26 16 12 H 0.08 0.22 7.46 -2.39 -0.02 0.20 16 13 C -0.12 1.06 7.29 31.12 0.23 1.29 16 14 C -0.06 0.57 3.85 -11.01 -0.04 0.52 16 15 H 0.12 -1.57 8.09 -2.39 -0.02 -1.59 16 16 C -0.05 0.27 5.29 -19.86 -0.11 0.16 16 17 C -0.10 0.29 9.49 22.29 0.21 0.50 16 18 C -0.04 -0.07 6.32 22.35 0.14 0.07 16 19 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.28 16 20 C -0.05 -0.12 6.32 22.34 0.14 0.03 16 21 Cl -0.06 -0.27 27.96 -2.72 -0.08 -0.35 16 22 C -0.10 0.16 9.83 22.29 0.22 0.38 16 23 C -0.10 0.46 8.62 22.27 0.19 0.65 16 24 C -0.14 0.83 7.25 31.12 0.23 1.05 16 25 N -0.29 -4.32 11.65 -48.16 -0.56 -4.88 16 26 C 0.11 1.54 6.74 42.53 0.29 1.82 16 27 C -0.04 -0.51 5.80 -20.04 -0.12 -0.62 16 28 C -0.11 -0.90 8.95 22.48 0.20 -0.70 16 29 C -0.13 -0.51 10.03 22.24 0.22 -0.28 16 30 C -0.11 -0.41 10.04 22.31 0.22 -0.18 16 31 C -0.13 -0.79 10.03 22.24 0.22 -0.57 16 32 C -0.11 -1.18 9.75 22.48 0.22 -0.96 16 33 H 0.40 -4.34 8.74 -74.06 -0.65 -4.99 16 34 H 0.08 -0.02 7.84 -2.39 -0.02 -0.04 16 35 H -0.28 -0.26 7.04 99.48 0.70 0.44 16 36 H -0.29 -0.37 7.11 99.48 0.71 0.34 16 37 H 0.20 -0.29 6.36 -2.91 -0.02 -0.31 16 38 H 0.17 -2.31 8.07 -2.38 -0.02 -2.32 16 39 H 0.15 -1.35 8.14 -2.39 -0.02 -1.37 16 40 H 0.42 -5.95 8.70 -92.71 -0.81 -6.76 16 41 H 0.10 -0.84 7.73 -2.38 -0.02 -0.86 16 42 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 43 H 0.16 -1.09 8.05 -2.91 -0.02 -1.11 16 44 H 0.15 -0.67 8.06 -2.91 -0.02 -0.70 16 45 H 0.16 -1.31 6.64 -2.91 -0.02 -1.33 16 46 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 47 H 0.10 -0.58 6.29 -2.39 -0.02 -0.60 16 48 H 0.16 1.06 4.52 -2.91 -0.01 1.05 16 49 H 0.15 -0.24 8.06 -2.91 -0.02 -0.27 16 50 H 0.15 -0.29 8.06 -2.91 -0.02 -0.31 16 51 H 0.14 0.21 8.06 -2.91 -0.02 0.19 16 52 H 0.11 1.25 8.06 -2.91 -0.02 1.23 16 Total: 0.00 -35.77 461.89 0.76 -35.01 By element: Atomic # 1 Polarization: -20.00 SS G_CDS: -0.41 Total: -20.40 kcal Atomic # 6 Polarization: -0.86 SS G_CDS: 4.82 Total: 3.96 kcal Atomic # 7 Polarization: -2.63 SS G_CDS: -4.07 Total: -6.71 kcal Atomic # 8 Polarization: -8.75 SS G_CDS: -1.55 Total: -10.30 kcal Atomic # 14 Polarization: -3.06 SS G_CDS: 2.11 Total: -0.94 kcal Atomic # 17 Polarization: -0.47 SS G_CDS: -0.15 Total: -0.62 kcal Total: -35.77 0.76 -35.01 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_12622748.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.545 kcal (2) G-P(sol) polarization free energy of solvation -35.767 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.777 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.011 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.23 seconds