Wall clock time and date at job start Mon Mar 8 2021 04:36:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.47098 * 2 1 4 4 C 1.50708 * 109.46831 * 119.99863 * 2 1 3 5 5 C 1.38329 * 119.87075 * 65.00744 * 4 2 1 6 6 C 1.38001 * 120.12756 * 179.97438 * 5 4 2 7 7 C 1.39403 * 119.87023 * 359.97438 * 6 5 4 8 8 C 1.48279 * 120.12726 * 180.02562 * 7 6 5 9 9 C 1.39502 * 119.97344 * 179.97438 * 8 7 6 10 10 C 1.37661 * 120.02361 * 179.97438 * 9 8 7 11 11 C 1.39708 * 119.97524 * 359.97438 * 10 9 8 12 12 C 1.47722 * 120.02655 * 179.97438 * 11 10 9 13 13 O 1.21574 * 119.99978 * 359.97438 * 12 11 10 14 14 N 1.34773 * 120.00137 * 180.02562 * 12 11 10 15 15 C 1.46506 * 120.00018 * 180.02562 * 14 12 11 16 16 H 1.08996 * 112.84937 * 336.19637 * 15 14 12 17 17 C 1.53953 * 113.53581 * 107.50240 * 15 14 12 18 18 C 1.53781 * 87.01863 * 89.19156 * 17 15 14 19 19 H 1.09008 * 113.61293 * 270.76616 * 18 17 15 20 20 C 1.50696 * 113.61553 * 139.95158 * 18 17 15 21 21 C 1.38210 * 119.98094 * 321.09373 * 20 18 17 22 22 C 1.38347 * 119.99609 * 180.27545 * 21 20 18 23 23 Cl 1.73600 * 120.01629 * 179.76390 * 22 21 20 24 24 C 1.38442 * 119.96523 * 359.74551 * 22 21 20 25 25 Cl 1.73607 * 120.02012 * 179.97438 * 24 22 21 26 26 C 1.38344 * 119.96102 * 0.02562 * 24 22 21 27 27 C 1.38209 * 120.00177 * 359.97438 * 26 24 22 28 28 C 1.53773 * 113.61345 * 204.99743 * 15 14 12 29 29 C 1.39703 * 119.95064 * 0.25354 * 11 10 9 30 30 C 1.37669 * 119.97886 * 359.47175 * 29 11 10 31 31 C 1.39409 * 119.74465 * 0.26972 * 7 6 5 32 32 C 1.38000 * 119.87053 * 359.42825 * 31 7 6 33 33 H 0.96700 * 113.99987 * 300.00165 * 1 2 3 34 34 H 1.09003 * 109.47516 * 239.99809 * 2 1 3 35 35 H 1.48499 * 109.99981 * 299.99968 * 3 2 1 36 36 H 1.48500 * 109.99659 * 61.31892 * 3 2 1 37 37 H 1.07997 * 119.94037 * 359.96663 * 5 4 2 38 38 H 1.07998 * 120.06513 * 180.02562 * 6 5 4 39 39 H 1.08000 * 119.98911 * 0.02562 * 9 8 7 40 40 H 1.08003 * 120.01210 * 180.02562 * 10 9 8 41 41 H 0.96997 * 120.00080 * 359.97438 * 14 12 11 42 42 H 1.09001 * 113.66993 * 334.65692 * 17 15 14 43 43 H 1.09000 * 113.61228 * 203.71123 * 17 15 14 44 44 H 1.07994 * 119.99816 * 359.97438 * 21 20 18 45 45 H 1.08009 * 120.00144 * 180.02562 * 26 24 22 46 46 H 1.08002 * 119.97964 * 179.97438 * 27 26 24 47 47 H 1.09005 * 113.61379 * 156.33492 * 28 15 14 48 48 H 1.09005 * 113.69441 * 25.44125 * 28 15 14 49 49 H 1.08001 * 120.01452 * 179.71915 * 29 11 10 50 50 H 1.07996 * 119.99356 * 180.27258 * 30 29 11 51 51 H 1.08000 * 120.06035 * 179.73667 * 31 7 6 52 52 H 1.07997 * 119.93836 * 180.31531 * 32 31 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6831 -2.0612 1.3958 6 6 2.1410 -2.7171 2.5203 7 6 2.8554 -2.0159 3.4904 8 6 3.3506 -2.7151 4.7006 9 6 4.0656 -2.0103 5.6692 10 6 4.5254 -2.6583 6.7934 11 6 4.2752 -4.0222 6.9643 12 6 4.7685 -4.7188 8.1700 13 8 5.3929 -4.1054 9.0137 14 7 4.5272 -6.0345 8.3341 15 6 5.0160 -6.7253 9.5301 16 1 5.8704 -6.2264 9.9875 17 6 3.9021 -7.0878 10.5290 18 6 3.7549 -8.4120 9.7610 19 1 3.0464 -8.3607 8.9341 20 6 3.5276 -9.6052 10.6529 21 6 4.2021 -9.7074 11.8549 22 6 3.9981 -10.8054 12.6714 23 17 4.8496 -10.9373 14.1784 24 6 3.1141 -11.7988 12.2861 25 17 2.8575 -13.1777 13.3093 26 6 2.4363 -11.6926 11.0848 27 6 2.6413 -10.5950 10.2704 28 6 5.2201 -8.2361 9.3287 29 6 3.5631 -4.7280 5.9914 30 6 3.0993 -4.0768 4.8707 31 6 3.0981 -0.6536 3.3209 32 6 2.6407 -0.0096 2.1893 33 1 -0.3933 0.4417 0.7650 34 1 1.7924 -0.5139 -0.8900 35 1 1.5615 2.4679 -1.2085 36 1 1.5878 2.4585 1.2243 37 1 1.1298 -2.6035 0.6434 38 1 1.9470 -3.7718 2.6481 39 1 4.2579 -0.9558 5.5374 40 1 5.0786 -2.1124 7.5433 41 1 4.0294 -6.5240 7.6608 42 1 3.0258 -6.4433 10.4602 43 1 4.2569 -7.2135 11.5520 44 1 4.8921 -8.9324 12.1545 45 1 1.7462 -12.4670 10.7838 46 1 2.1122 -10.5126 9.3324 47 1 5.9359 -8.6763 10.0229 48 1 5.4065 -8.5186 8.2926 49 1 3.3730 -5.7833 6.1204 50 1 2.5451 -4.6212 4.1205 51 1 3.6473 -0.1044 4.0713 52 1 2.8325 1.0446 2.0545 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:22 Heat of formation + Delta-G solvation = 34.947249 kcal Electronic energy + Delta-G solvation = -36562.218617 eV Core-core repulsion = 31510.595285 eV Total energy + Delta-G solvation = -5051.623332 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.089 amu Computer time = 2.31 seconds Orbital eigenvalues (eV) -41.81238 -41.12274 -40.56261 -39.53798 -38.81888 -37.63179 -37.57235 -37.44058 -34.83693 -33.88049 -32.57097 -31.95020 -31.80012 -31.51030 -30.64020 -27.20767 -26.71297 -26.18680 -24.64701 -24.57034 -23.97745 -22.86351 -22.54448 -22.33175 -21.34519 -20.27899 -19.25803 -18.63826 -18.40432 -17.79076 -17.29615 -17.06296 -16.81893 -16.65069 -16.32790 -16.15084 -16.08669 -15.99784 -15.59027 -15.41016 -15.21785 -15.15678 -15.02080 -14.91018 -14.85311 -14.57468 -14.27355 -14.18894 -14.01262 -13.76227 -13.60295 -13.52158 -13.46078 -13.15754 -12.94948 -12.91021 -12.76328 -12.58034 -12.41782 -12.28383 -12.06320 -12.04298 -11.92651 -11.82509 -11.58434 -11.51572 -11.26184 -11.11345 -10.75638 -10.58384 -10.14949 -10.03978 -9.97700 -9.93686 -9.60299 -9.06181 -4.92951 -0.67380 -0.11940 0.05687 0.37352 0.42220 0.51655 0.79961 1.19964 1.30536 1.58267 1.79003 1.94986 2.02313 2.35921 2.61713 3.02400 3.38996 3.41043 3.46911 3.56434 3.62206 3.64736 3.66005 3.70203 3.80884 3.89887 3.91800 4.02950 4.05892 4.06758 4.11510 4.25042 4.27232 4.29515 4.30651 4.38949 4.55856 4.59691 4.66407 4.70342 4.72638 4.77165 4.82691 4.87541 4.91937 4.93975 4.97851 5.02118 5.04499 5.10532 5.14187 5.16786 5.22786 5.28659 5.39332 5.43567 5.51529 5.56725 5.62440 5.67415 5.81962 5.95003 6.46266 6.46995 7.14141 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.081 4.081 3 Si 0.761 3.239 4 C -0.115 4.115 5 C -0.101 4.101 6 C -0.107 4.107 7 C -0.059 4.059 8 C -0.023 4.023 9 C -0.124 4.124 10 C -0.071 4.071 11 C -0.152 4.152 12 C 0.559 3.441 13 O -0.581 6.581 14 N -0.693 5.693 15 C 0.113 3.887 16 H 0.084 0.916 17 C -0.145 4.145 18 C -0.062 4.062 19 H 0.128 0.872 20 C -0.052 4.052 21 C -0.102 4.102 22 C -0.045 4.045 23 Cl -0.063 7.063 24 C -0.053 4.053 25 Cl -0.064 7.064 26 C -0.100 4.100 27 C -0.092 4.092 28 C -0.125 4.125 29 C -0.072 4.072 30 C -0.120 4.120 31 C -0.108 4.108 32 C -0.122 4.122 33 H 0.386 0.614 34 H 0.126 0.874 35 H -0.305 1.305 36 H -0.283 1.283 37 H 0.133 0.867 38 H 0.148 0.852 39 H 0.146 0.854 40 H 0.126 0.874 41 H 0.416 0.584 42 H 0.072 0.928 43 H 0.094 0.906 44 H 0.149 0.851 45 H 0.158 0.842 46 H 0.169 0.831 47 H 0.099 0.901 48 H 0.095 0.905 49 H 0.161 0.839 50 H 0.157 0.843 51 H 0.144 0.856 52 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.124 -1.519 -6.462 6.732 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.190 4.190 3 Si 0.667 3.333 4 C -0.116 4.116 5 C -0.119 4.119 6 C -0.124 4.124 7 C -0.059 4.059 8 C -0.023 4.023 9 C -0.141 4.141 10 C -0.090 4.090 11 C -0.155 4.155 12 C 0.348 3.652 13 O -0.461 6.461 14 N -0.345 5.345 15 C 0.007 3.993 16 H 0.103 0.897 17 C -0.184 4.184 18 C -0.080 4.080 19 H 0.146 0.854 20 C -0.052 4.052 21 C -0.121 4.121 22 C -0.072 4.072 23 Cl -0.034 7.034 24 C -0.080 4.080 25 Cl -0.035 7.035 26 C -0.118 4.118 27 C -0.110 4.110 28 C -0.163 4.163 29 C -0.091 4.091 30 C -0.137 4.137 31 C -0.126 4.126 32 C -0.140 4.140 33 H 0.235 0.765 34 H 0.144 0.856 35 H -0.234 1.234 36 H -0.209 1.209 37 H 0.151 0.849 38 H 0.166 0.834 39 H 0.164 0.836 40 H 0.144 0.856 41 H 0.255 0.745 42 H 0.090 0.910 43 H 0.112 0.888 44 H 0.167 0.833 45 H 0.175 0.825 46 H 0.187 0.813 47 H 0.117 0.883 48 H 0.114 0.886 49 H 0.178 0.822 50 H 0.174 0.826 51 H 0.162 0.838 52 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.738 -0.743 -6.165 6.253 hybrid contribution -1.129 -0.358 1.018 1.561 sum -1.867 -1.100 -5.147 5.585 Atomic orbital electron populations 1.86579 1.18490 1.80326 1.50193 1.25194 0.83420 1.11536 0.98897 0.94086 0.90475 0.72474 0.76244 1.20435 0.99295 0.95129 0.96723 1.21121 0.98924 0.93890 0.97962 1.21529 0.96788 1.01067 0.93041 1.18945 0.99156 0.93779 0.94037 1.19154 0.96021 0.94038 0.93099 1.21376 0.98339 1.01218 0.93188 1.21255 0.96936 0.93531 0.97282 1.19978 1.04403 0.95135 0.95989 1.18552 0.78532 0.82380 0.85741 1.90783 1.42503 1.67120 1.45726 1.45434 1.57008 1.08465 1.23558 1.21909 0.97489 0.93539 0.86336 0.89738 1.23608 0.99315 0.96354 0.99100 1.21684 0.98529 0.90212 0.97616 0.85364 1.19917 0.95096 0.96445 0.93753 1.21062 1.00923 0.96272 0.93816 1.20949 0.98368 0.97215 0.90667 1.98405 1.76028 1.97942 1.31047 1.21049 1.00949 0.90728 0.95305 1.98402 1.95720 1.41659 1.67696 1.21353 0.99068 1.00025 0.91389 1.21506 0.97099 0.91806 1.00586 1.23394 0.95966 0.92790 1.04132 1.21481 0.94555 1.00908 0.92115 1.21482 1.00304 0.93429 0.98525 1.21469 0.99391 0.93782 0.97941 1.21163 0.98453 1.00395 0.93958 0.76509 0.85614 1.23366 1.20944 0.84884 0.83445 0.83614 0.85570 0.74472 0.90956 0.88807 0.83311 0.82481 0.81337 0.88251 0.88609 0.82165 0.82552 0.83815 0.84148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.60 12.83 -148.98 -1.91 -2.51 16 2 C -0.08 0.18 2.80 71.24 0.20 0.38 16 3 Si 0.76 -2.20 29.87 68.60 2.05 -0.15 16 4 C -0.12 0.24 5.36 -19.82 -0.11 0.14 16 5 C -0.10 0.22 9.67 22.23 0.21 0.44 16 6 C -0.11 0.36 9.43 22.49 0.21 0.58 16 7 C -0.06 0.12 5.88 -20.04 -0.12 0.00 16 8 C -0.02 0.05 5.88 -20.00 -0.12 -0.07 16 9 C -0.12 0.12 9.41 22.44 0.21 0.33 16 10 C -0.07 -0.15 9.58 22.49 0.22 0.07 16 11 C -0.15 -0.06 5.88 -20.06 -0.12 -0.18 16 12 C 0.56 1.92 7.77 86.75 0.67 2.59 16 13 O -0.58 -7.39 15.93 -3.95 -0.06 -7.45 16 14 N -0.69 3.03 5.21 -442.75 -2.31 0.72 16 15 C 0.11 -0.43 4.33 45.57 0.20 -0.24 16 16 H 0.08 0.14 7.46 -2.39 -0.02 0.12 16 17 C -0.15 0.76 7.27 31.18 0.23 0.99 16 18 C -0.06 0.58 3.85 -11.02 -0.04 0.54 16 19 H 0.13 -1.77 8.09 -2.38 -0.02 -1.79 16 20 C -0.05 0.30 5.29 -19.87 -0.11 0.19 16 21 C -0.10 0.21 8.33 22.29 0.19 0.39 16 22 C -0.04 -0.09 6.32 22.34 0.14 0.05 16 23 Cl -0.06 -0.28 27.96 -2.72 -0.08 -0.36 16 24 C -0.05 -0.09 6.32 22.34 0.14 0.05 16 25 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 26 C -0.10 0.32 9.83 22.29 0.22 0.54 16 27 C -0.09 0.63 9.71 22.27 0.22 0.85 16 28 C -0.12 1.08 7.29 31.12 0.23 1.31 16 29 C -0.07 0.42 9.52 22.49 0.21 0.64 16 30 C -0.12 0.65 9.41 22.44 0.21 0.86 16 31 C -0.11 0.29 9.43 22.50 0.21 0.51 16 32 C -0.12 0.37 8.65 22.24 0.19 0.56 16 33 H 0.39 -1.62 8.70 -74.06 -0.64 -2.27 16 34 H 0.13 -0.48 7.96 -2.39 -0.02 -0.50 16 35 H -0.31 -1.61 7.11 99.48 0.71 -0.91 16 36 H -0.28 -0.22 7.01 99.48 0.70 0.48 16 37 H 0.13 -0.46 8.06 -2.91 -0.02 -0.48 16 38 H 0.15 -1.19 6.19 -2.91 -0.02 -1.21 16 39 H 0.15 -0.66 6.19 -2.91 -0.02 -0.68 16 40 H 0.13 0.50 7.64 -2.91 -0.02 0.48 16 41 H 0.42 -4.74 6.72 -92.71 -0.62 -5.36 16 42 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 43 H 0.09 -0.42 6.38 -2.39 -0.02 -0.44 16 44 H 0.15 -0.58 6.72 -2.91 -0.02 -0.60 16 45 H 0.16 -1.02 8.06 -2.91 -0.02 -1.04 16 46 H 0.17 -2.20 8.05 -2.91 -0.02 -2.22 16 47 H 0.10 -0.77 7.66 -2.38 -0.02 -0.79 16 48 H 0.10 -1.05 8.14 -2.38 -0.02 -1.07 16 49 H 0.16 -2.15 6.39 -2.91 -0.02 -2.17 16 50 H 0.16 -1.64 6.19 -2.91 -0.02 -1.66 16 51 H 0.14 -0.88 6.19 -2.91 -0.02 -0.90 16 52 H 0.14 -0.84 4.82 -2.91 -0.01 -0.85 16 Total: 0.00 -23.61 454.81 0.91 -22.70 By element: Atomic # 1 Polarization: -23.92 SS G_CDS: -0.21 Total: -24.13 kcal Atomic # 6 Polarization: 8.00 SS G_CDS: 3.50 Total: 11.51 kcal Atomic # 7 Polarization: 3.03 SS G_CDS: -2.31 Total: 0.72 kcal Atomic # 8 Polarization: -7.99 SS G_CDS: -1.97 Total: -9.96 kcal Atomic # 14 Polarization: -2.20 SS G_CDS: 2.05 Total: -0.15 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -0.15 Total: -0.69 kcal Total: -23.61 0.91 -22.70 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.646 kcal (2) G-P(sol) polarization free energy of solvation -23.609 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.911 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.698 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.31 seconds