Wall clock time and date at job start Mon Mar 8 2021 04:36:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86297 * 109.47048 * 2 1 4 4 C 1.50705 * 109.47192 * 239.99925 * 2 1 3 5 5 C 1.38897 * 119.67373 * 120.01990 * 4 2 1 6 6 C 1.36472 * 120.61142 * 179.97438 * 5 4 2 7 7 C 1.40058 * 119.83482 * 0.02562 * 6 5 4 8 8 C 1.41593 * 133.38750 * 179.97438 * 7 6 5 9 9 C 1.35860 * 107.72884 * 179.97438 * 8 7 6 10 10 C 1.47063 * 125.42392 * 179.97438 * 9 8 7 11 11 O 1.21653 * 120.00015 * 0.02562 * 10 9 8 12 12 N 1.34777 * 119.99997 * 180.02562 * 10 9 8 13 13 C 1.46498 * 119.99828 * 180.27721 * 12 10 9 14 14 H 1.09002 * 112.85022 * 335.91707 * 13 12 10 15 15 C 1.53782 * 113.61718 * 107.22525 * 13 12 10 16 16 C 1.53774 * 87.08161 * 89.11276 * 15 13 12 17 17 H 1.09000 * 113.69696 * 270.87608 * 16 15 13 18 18 C 1.50708 * 113.61658 * 139.98259 * 16 15 13 19 19 C 1.38198 * 119.98399 * 142.50354 * 18 16 15 20 20 C 1.38342 * 120.00304 * 179.97438 * 19 18 16 21 21 Cl 1.73598 * 120.02481 * 179.97438 * 20 19 18 22 22 C 1.38448 * 119.96104 * 0.02562 * 20 19 18 23 23 Cl 1.73596 * 120.02064 * 180.02562 * 22 20 19 24 24 C 1.38355 * 119.95783 * 0.02562 * 22 20 19 25 25 C 1.38202 * 120.00085 * 359.74466 * 24 22 20 26 26 C 1.53781 * 113.61158 * 204.72374 * 13 12 10 27 27 N 1.38140 * 109.15012 * 0.24329 * 9 8 7 28 28 C 1.37486 * 108.78816 * 359.60170 * 27 9 8 29 29 C 1.37709 * 119.67506 * 299.99976 * 4 2 1 30 30 H 0.96707 * 113.99677 * 59.99886 * 1 2 3 31 31 H 1.08996 * 109.46730 * 119.99815 * 2 1 3 32 32 H 1.48504 * 110.00230 * 298.67800 * 3 2 1 33 33 H 1.48501 * 110.00045 * 59.99694 * 3 2 1 34 34 H 1.07995 * 119.69190 * 0.02562 * 5 4 2 35 35 H 1.08010 * 120.07985 * 179.97438 * 6 5 4 36 36 H 1.07998 * 126.13211 * 0.02562 * 8 7 6 37 37 H 0.97001 * 119.99727 * 359.97438 * 12 10 9 38 38 H 1.08999 * 113.61704 * 203.66488 * 15 13 12 39 39 H 1.09006 * 113.61098 * 334.56706 * 15 13 12 40 40 H 1.08001 * 119.99717 * 359.95385 * 19 18 16 41 41 H 1.08004 * 119.99557 * 180.02562 * 24 22 20 42 42 H 1.07995 * 119.98425 * 180.28223 * 25 24 22 43 43 H 1.08995 * 113.61890 * 25.43111 * 26 13 12 44 44 H 1.08997 * 113.61580 * 156.33630 * 26 13 12 45 45 H 0.96999 * 125.60792 * 179.71535 * 27 9 8 46 46 H 1.08000 * 120.09748 * 0.04895 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7299 -0.0290 -2.1401 6 6 3.1957 -0.6538 -3.2604 7 6 2.8669 -1.9943 -3.4983 8 6 3.1817 -2.9034 -4.5373 9 6 2.5842 -4.0882 -4.2454 10 6 2.6571 -5.3050 -5.0681 11 8 3.2933 -5.3010 -6.1050 12 7 2.0191 -6.4246 -4.6732 13 6 2.0967 -7.6385 -5.4897 14 1 2.3144 -7.4308 -6.5373 15 6 2.9851 -8.7355 -4.8797 16 6 1.7274 -9.2404 -4.1532 17 1 1.5675 -8.7761 -3.1800 18 6 1.6174 -10.7428 -4.1098 19 6 1.1166 -11.3664 -2.9828 20 6 1.0149 -12.7455 -2.9427 21 17 0.3865 -13.5295 -1.5271 22 6 1.4157 -13.5003 -4.0320 23 17 1.2882 -15.2309 -3.9837 24 6 1.9179 -12.8743 -5.1591 25 6 2.0142 -11.4963 -5.1991 26 6 0.9103 -8.5953 -5.2851 27 7 1.8925 -3.9660 -3.0560 28 6 2.0576 -2.6879 -2.5769 29 6 1.5947 -2.0289 -1.4417 30 1 -0.3933 0.4418 -0.7651 31 1 1.7923 -0.5138 0.8900 32 1 1.5880 2.4586 -1.2243 33 1 1.5614 2.4679 1.2085 34 1 2.9851 1.0045 -1.9587 35 1 3.8157 -0.1156 -3.9622 36 1 3.7885 -2.6929 -5.4055 37 1 1.5121 -6.4278 -3.8463 38 1 3.3770 -9.4388 -5.6144 39 1 3.7531 -8.3520 -4.2078 40 1 0.8048 -10.7771 -2.1331 41 1 2.2303 -13.4625 -6.0093 42 1 2.4020 -11.0077 -6.0807 43 1 0.0032 -8.0988 -4.9406 44 1 0.7349 -9.2604 -6.1306 45 1 1.3765 -4.6672 -2.6282 46 1 0.9729 -2.5500 -0.7288 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:32 Heat of formation + Delta-G solvation = 35.675612 kcal Electronic energy + Delta-G solvation = -32492.150877 eV Core-core repulsion = 27787.123118 eV Total energy + Delta-G solvation = -4705.027759 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.069 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -42.77301 -41.78372 -40.52314 -39.38026 -38.85955 -37.57633 -37.47847 -37.01563 -34.80000 -33.32050 -32.34063 -31.78929 -31.00166 -30.45536 -27.39160 -27.02044 -26.24537 -24.61023 -24.17381 -23.31261 -22.82897 -22.06540 -21.34480 -20.51025 -19.66169 -18.71520 -18.49745 -17.90061 -17.37789 -17.04797 -16.98527 -16.69586 -16.52896 -16.24121 -15.89285 -15.84925 -15.59590 -15.39796 -15.18920 -15.08556 -14.95737 -14.81722 -14.65964 -14.50584 -14.02221 -13.94884 -13.84365 -13.57247 -13.17485 -13.09196 -12.92495 -12.64716 -12.59773 -12.52607 -12.50274 -12.08571 -12.00364 -11.96148 -11.80317 -11.60420 -11.53763 -11.35025 -10.99704 -10.64160 -10.38090 -10.12181 -9.70946 -9.37785 -8.87440 -4.95740 -0.39657 -0.25025 -0.08755 0.47722 0.77179 0.93767 1.13919 1.26121 1.60242 1.66922 1.79931 1.96876 2.16539 2.20478 2.72735 3.12156 3.30790 3.31141 3.37136 3.47714 3.49054 3.56718 3.62792 3.66372 3.73530 3.86073 3.96635 4.00895 4.18409 4.19408 4.24174 4.33736 4.38623 4.44468 4.44996 4.46595 4.54446 4.60609 4.63243 4.73672 4.74863 4.83279 4.84827 4.88008 4.92374 5.13060 5.25790 5.33595 5.36121 5.39337 5.48076 5.56048 5.91411 6.10777 6.26104 6.36031 6.89663 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.075 4.075 3 Si 0.689 3.311 4 C -0.085 4.085 5 C -0.145 4.145 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.097 4.097 9 C 0.011 3.989 10 C 0.589 3.411 11 O -0.513 6.513 12 N -0.713 5.713 13 C 0.120 3.880 14 H 0.112 0.888 15 C -0.143 4.143 16 C -0.076 4.076 17 H 0.101 0.899 18 C -0.055 4.055 19 C -0.096 4.096 20 C -0.028 4.028 21 Cl -0.046 7.046 22 C -0.036 4.036 23 Cl -0.046 7.046 24 C -0.094 4.094 25 C -0.101 4.101 26 C -0.135 4.135 27 N -0.579 5.579 28 C 0.116 3.884 29 C -0.105 4.105 30 H 0.377 0.623 31 H 0.119 0.881 32 H -0.259 1.259 33 H -0.258 1.258 34 H 0.130 0.870 35 H 0.132 0.868 36 H 0.159 0.841 37 H 0.397 0.603 38 H 0.100 0.900 39 H 0.078 0.922 40 H 0.141 0.859 41 H 0.145 0.855 42 H 0.141 0.859 43 H 0.079 0.921 44 H 0.103 0.897 45 H 0.417 0.583 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.761 1.587 0.124 1.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.087 4.087 5 C -0.164 4.164 6 C -0.069 4.069 7 C -0.122 4.122 8 C -0.124 4.124 9 C -0.098 4.098 10 C 0.376 3.624 11 O -0.388 6.388 12 N -0.364 5.364 13 C 0.015 3.985 14 H 0.130 0.870 15 C -0.182 4.182 16 C -0.094 4.094 17 H 0.119 0.881 18 C -0.055 4.055 19 C -0.115 4.115 20 C -0.056 4.056 21 Cl -0.017 7.017 22 C -0.063 4.063 23 Cl -0.017 7.017 24 C -0.113 4.113 25 C -0.119 4.119 26 C -0.173 4.173 27 N -0.184 5.184 28 C 0.006 3.994 29 C -0.125 4.125 30 H 0.224 0.776 31 H 0.137 0.863 32 H -0.184 1.184 33 H -0.183 1.183 34 H 0.147 0.853 35 H 0.150 0.850 36 H 0.177 0.823 37 H 0.231 0.769 38 H 0.118 0.882 39 H 0.097 0.903 40 H 0.159 0.841 41 H 0.162 0.838 42 H 0.158 0.842 43 H 0.098 0.902 44 H 0.121 0.879 45 H 0.255 0.745 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 0.966 1.716 0.042 1.970 hybrid contribution -1.718 -1.003 0.375 2.024 sum -0.752 0.714 0.417 1.118 Atomic orbital electron populations 1.86599 1.17681 1.80019 1.49413 1.25055 0.83982 1.11169 0.98271 0.94841 0.91730 0.74219 0.80214 1.19987 0.98308 0.93722 0.96718 1.20487 1.00682 0.99948 0.95275 1.20384 0.97758 0.92026 0.96707 1.18229 1.02759 0.94907 0.96259 1.20987 1.01469 0.90297 0.99650 1.20040 1.03549 0.96494 0.89669 1.17179 0.79136 0.81451 0.84662 1.90891 1.41043 1.83565 1.23270 1.45548 1.53417 1.10969 1.26433 1.21891 0.96794 0.83134 0.96667 0.86989 1.23597 0.96436 0.97826 1.00298 1.21657 0.97991 0.90269 0.99484 0.88105 1.19710 0.97319 0.95414 0.93093 1.20940 0.99861 0.91516 0.99181 1.20818 1.02394 0.92967 0.89413 1.98417 1.84999 1.80473 1.37803 1.20863 1.03964 0.86086 0.95412 1.98417 1.96481 1.08342 1.98486 1.21093 0.98524 0.94906 0.96746 1.21106 0.99190 0.92754 0.98844 1.23456 0.97229 0.97689 0.98895 1.41876 1.45159 1.11291 1.20051 1.18305 0.99990 0.84639 0.96438 1.19860 1.02594 0.94143 0.95914 0.77560 0.86313 1.18389 1.18334 0.85270 0.84968 0.82338 0.76931 0.88184 0.90285 0.84108 0.83767 0.84164 0.90192 0.87863 0.74538 0.85523 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.24 12.76 -35.23 -0.45 -0.69 16 2 C -0.07 0.08 2.81 36.01 0.10 0.18 16 3 Si 0.69 -1.04 29.75 -169.99 -5.06 -6.10 16 4 C -0.09 0.05 5.40 -104.57 -0.56 -0.52 16 5 C -0.15 0.13 8.59 -39.97 -0.34 -0.22 16 6 C -0.05 0.02 10.06 -39.54 -0.40 -0.38 16 7 C -0.12 -0.11 6.16 -106.93 -0.66 -0.77 16 8 C -0.10 -0.11 10.53 -39.16 -0.41 -0.52 16 9 C 0.01 0.00 6.96 -82.30 -0.57 -0.57 16 10 C 0.59 0.44 7.80 -12.68 -0.10 0.34 16 11 O -0.51 -2.27 16.44 5.23 0.09 -2.19 16 12 N -0.71 1.84 5.26 -54.20 -0.29 1.56 16 13 C 0.12 -0.33 4.32 -67.12 -0.29 -0.62 16 14 H 0.11 -0.13 7.47 -51.93 -0.39 -0.52 16 15 C -0.14 0.47 7.25 -25.92 -0.19 0.29 16 16 C -0.08 0.31 3.86 -90.96 -0.35 -0.05 16 17 H 0.10 -0.50 8.09 -51.93 -0.42 -0.92 16 18 C -0.05 0.13 5.29 -104.62 -0.55 -0.42 16 19 C -0.10 0.12 9.49 -39.56 -0.38 -0.26 16 20 C -0.03 -0.02 6.32 -39.47 -0.25 -0.27 16 21 Cl -0.05 -0.06 27.96 -51.86 -1.45 -1.51 16 22 C -0.04 -0.02 6.32 -39.46 -0.25 -0.27 16 23 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 24 C -0.09 0.11 9.83 -39.55 -0.39 -0.28 16 25 C -0.10 0.25 8.60 -39.58 -0.34 -0.09 16 26 C -0.13 0.57 7.29 -25.92 -0.19 0.39 16 27 N -0.58 0.91 6.07 -7.36 -0.04 0.87 16 28 C 0.12 0.03 7.25 -83.97 -0.61 -0.58 16 29 C -0.10 0.03 9.61 -39.42 -0.38 -0.35 16 30 H 0.38 -0.83 8.70 45.56 0.40 -0.43 16 31 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 32 H -0.26 -0.13 7.11 56.52 0.40 0.28 16 33 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 34 H 0.13 -0.34 4.82 -52.49 -0.25 -0.59 16 35 H 0.13 -0.30 8.06 -52.48 -0.42 -0.72 16 36 H 0.16 0.08 8.06 -52.49 -0.42 -0.34 16 37 H 0.40 -2.05 7.76 -40.82 -0.32 -2.37 16 38 H 0.10 -0.38 6.32 -51.93 -0.33 -0.71 16 39 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.14 -0.38 8.05 -52.49 -0.42 -0.81 16 41 H 0.14 -0.39 8.06 -52.48 -0.42 -0.81 16 42 H 0.14 -0.62 6.67 -52.49 -0.35 -0.97 16 43 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 44 H 0.10 -0.46 7.72 -51.93 -0.40 -0.86 16 45 H 0.42 -1.95 8.12 -40.82 -0.33 -2.28 16 46 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 LS Contribution 414.36 15.07 6.24 6.24 Total: 0.00 -8.56 414.36 -14.48 -23.04 By element: Atomic # 1 Polarization: -9.76 SS G_CDS: -4.96 Total: -14.73 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -7.11 Total: -4.98 kcal Atomic # 7 Polarization: 2.75 SS G_CDS: -0.33 Total: 2.42 kcal Atomic # 8 Polarization: -2.51 SS G_CDS: -0.36 Total: -2.87 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.06 Total: -6.10 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -2.90 Total: -3.03 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -8.56 -14.48 -23.04 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.715 kcal (2) G-P(sol) polarization free energy of solvation -8.561 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.154 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.478 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.039 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds