Wall clock time and date at job start Mon Mar 8 2021 04:36:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86297 * 109.47048 * 2 1 4 4 C 1.50705 * 109.47192 * 239.99925 * 2 1 3 5 5 C 1.38897 * 119.67373 * 120.01990 * 4 2 1 6 6 C 1.36472 * 120.61142 * 179.97438 * 5 4 2 7 7 C 1.40058 * 119.83482 * 0.02562 * 6 5 4 8 8 C 1.41593 * 133.38750 * 179.97438 * 7 6 5 9 9 C 1.35860 * 107.72884 * 179.97438 * 8 7 6 10 10 C 1.47063 * 125.42392 * 179.97438 * 9 8 7 11 11 O 1.21653 * 120.00015 * 0.02562 * 10 9 8 12 12 N 1.34777 * 119.99997 * 180.02562 * 10 9 8 13 13 C 1.46498 * 119.99828 * 180.27721 * 12 10 9 14 14 H 1.09002 * 112.85022 * 335.91707 * 13 12 10 15 15 C 1.53782 * 113.61718 * 107.22525 * 13 12 10 16 16 C 1.53774 * 87.08161 * 89.11276 * 15 13 12 17 17 H 1.09000 * 113.69696 * 270.87608 * 16 15 13 18 18 C 1.50708 * 113.61658 * 139.98259 * 16 15 13 19 19 C 1.38198 * 119.98399 * 142.50354 * 18 16 15 20 20 C 1.38342 * 120.00304 * 179.97438 * 19 18 16 21 21 Cl 1.73598 * 120.02481 * 179.97438 * 20 19 18 22 22 C 1.38448 * 119.96104 * 0.02562 * 20 19 18 23 23 Cl 1.73596 * 120.02064 * 180.02562 * 22 20 19 24 24 C 1.38355 * 119.95783 * 0.02562 * 22 20 19 25 25 C 1.38202 * 120.00085 * 359.74466 * 24 22 20 26 26 C 1.53781 * 113.61158 * 204.72374 * 13 12 10 27 27 N 1.38140 * 109.15012 * 0.24329 * 9 8 7 28 28 C 1.37486 * 108.78816 * 359.60170 * 27 9 8 29 29 C 1.37709 * 119.67506 * 299.99976 * 4 2 1 30 30 H 0.96707 * 113.99677 * 59.99886 * 1 2 3 31 31 H 1.08996 * 109.46730 * 119.99815 * 2 1 3 32 32 H 1.48504 * 110.00230 * 298.67800 * 3 2 1 33 33 H 1.48501 * 110.00045 * 59.99694 * 3 2 1 34 34 H 1.07995 * 119.69190 * 0.02562 * 5 4 2 35 35 H 1.08010 * 120.07985 * 179.97438 * 6 5 4 36 36 H 1.07998 * 126.13211 * 0.02562 * 8 7 6 37 37 H 0.97001 * 119.99727 * 359.97438 * 12 10 9 38 38 H 1.08999 * 113.61704 * 203.66488 * 15 13 12 39 39 H 1.09006 * 113.61098 * 334.56706 * 15 13 12 40 40 H 1.08001 * 119.99717 * 359.95385 * 19 18 16 41 41 H 1.08004 * 119.99557 * 180.02562 * 24 22 20 42 42 H 1.07995 * 119.98425 * 180.28223 * 25 24 22 43 43 H 1.08995 * 113.61890 * 25.43111 * 26 13 12 44 44 H 1.08997 * 113.61580 * 156.33630 * 26 13 12 45 45 H 0.96999 * 125.60792 * 179.71535 * 27 9 8 46 46 H 1.08000 * 120.09748 * 0.04895 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7299 -0.0290 -2.1401 6 6 3.1957 -0.6538 -3.2604 7 6 2.8669 -1.9943 -3.4983 8 6 3.1817 -2.9034 -4.5373 9 6 2.5842 -4.0882 -4.2454 10 6 2.6571 -5.3050 -5.0681 11 8 3.2933 -5.3010 -6.1050 12 7 2.0191 -6.4246 -4.6732 13 6 2.0967 -7.6385 -5.4897 14 1 2.3144 -7.4308 -6.5373 15 6 2.9851 -8.7355 -4.8797 16 6 1.7274 -9.2404 -4.1532 17 1 1.5675 -8.7761 -3.1800 18 6 1.6174 -10.7428 -4.1098 19 6 1.1166 -11.3664 -2.9828 20 6 1.0149 -12.7455 -2.9427 21 17 0.3865 -13.5295 -1.5271 22 6 1.4157 -13.5003 -4.0320 23 17 1.2882 -15.2309 -3.9837 24 6 1.9179 -12.8743 -5.1591 25 6 2.0142 -11.4963 -5.1991 26 6 0.9103 -8.5953 -5.2851 27 7 1.8925 -3.9660 -3.0560 28 6 2.0576 -2.6879 -2.5769 29 6 1.5947 -2.0289 -1.4417 30 1 -0.3933 0.4418 -0.7651 31 1 1.7923 -0.5138 0.8900 32 1 1.5880 2.4586 -1.2243 33 1 1.5614 2.4679 1.2085 34 1 2.9851 1.0045 -1.9587 35 1 3.8157 -0.1156 -3.9622 36 1 3.7885 -2.6929 -5.4055 37 1 1.5121 -6.4278 -3.8463 38 1 3.3770 -9.4388 -5.6144 39 1 3.7531 -8.3520 -4.2078 40 1 0.8048 -10.7771 -2.1331 41 1 2.2303 -13.4625 -6.0093 42 1 2.4020 -11.0077 -6.0807 43 1 0.0032 -8.0988 -4.9406 44 1 0.7349 -9.2604 -6.1306 45 1 1.3765 -4.6672 -2.6282 46 1 0.9729 -2.5500 -0.7288 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:30 Heat of formation + Delta-G solvation = 39.986545 kcal Electronic energy + Delta-G solvation = -32491.963941 eV Core-core repulsion = 27787.123118 eV Total energy + Delta-G solvation = -4704.840823 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.069 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -42.72613 -41.61576 -40.48445 -39.28639 -38.83160 -37.58764 -37.45974 -36.97681 -34.74067 -33.27249 -32.21085 -31.69115 -30.93539 -30.39779 -27.31508 -26.73089 -26.10161 -24.52462 -24.05163 -23.25355 -22.70717 -22.01067 -21.31362 -20.33416 -19.57117 -18.61422 -18.43361 -17.85077 -17.22217 -16.94102 -16.89730 -16.59624 -16.49923 -16.18498 -15.81178 -15.75234 -15.54062 -15.29544 -15.10337 -15.03737 -14.86771 -14.71569 -14.58196 -14.47706 -14.02248 -13.79120 -13.58939 -13.40243 -13.15787 -12.97089 -12.94633 -12.57149 -12.51283 -12.44234 -12.39574 -12.10353 -11.97505 -11.88278 -11.62163 -11.56168 -11.42739 -11.31158 -10.97215 -10.59523 -10.27788 -10.01255 -9.62366 -9.33077 -8.82337 -4.86069 -0.37444 -0.15182 0.04177 0.53409 0.78192 0.93844 1.18023 1.35130 1.65971 1.72789 1.93050 2.02527 2.15906 2.33259 2.77248 3.37686 3.42666 3.50431 3.55334 3.64564 3.65950 3.68523 3.74444 3.88132 3.97624 4.05178 4.07098 4.17030 4.25714 4.30172 4.34867 4.45744 4.53940 4.59520 4.65155 4.67148 4.75594 4.80646 4.84310 4.89529 4.92173 4.99263 4.99906 5.05845 5.09301 5.27162 5.36038 5.41204 5.52798 5.55252 5.57093 5.58472 5.98631 6.24191 6.42780 6.51057 6.93976 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.079 4.079 3 Si 0.766 3.234 4 C -0.087 4.087 5 C -0.148 4.148 6 C -0.059 4.059 7 C -0.135 4.135 8 C -0.118 4.118 9 C 0.011 3.989 10 C 0.590 3.410 11 O -0.557 6.557 12 N -0.696 5.696 13 C 0.113 3.887 14 H 0.095 0.905 15 C -0.141 4.141 16 C -0.068 4.068 17 H 0.116 0.884 18 C -0.050 4.050 19 C -0.099 4.099 20 C -0.044 4.044 21 Cl -0.062 7.062 22 C -0.053 4.053 23 Cl -0.063 7.063 24 C -0.099 4.099 25 C -0.097 4.097 26 C -0.124 4.124 27 N -0.564 5.564 28 C 0.108 3.892 29 C -0.109 4.109 30 H 0.386 0.614 31 H 0.128 0.872 32 H -0.283 1.283 33 H -0.306 1.306 34 H 0.146 0.854 35 H 0.147 0.853 36 H 0.155 0.845 37 H 0.411 0.589 38 H 0.106 0.894 39 H 0.070 0.930 40 H 0.155 0.845 41 H 0.156 0.844 42 H 0.163 0.837 43 H 0.089 0.911 44 H 0.109 0.891 45 H 0.431 0.569 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.527 2.020 0.351 2.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.188 4.188 3 Si 0.672 3.328 4 C -0.089 4.089 5 C -0.166 4.166 6 C -0.077 4.077 7 C -0.139 4.139 8 C -0.145 4.145 9 C -0.099 4.099 10 C 0.377 3.623 11 O -0.435 6.435 12 N -0.346 5.346 13 C 0.008 3.992 14 H 0.113 0.887 15 C -0.179 4.179 16 C -0.086 4.086 17 H 0.134 0.866 18 C -0.051 4.051 19 C -0.118 4.118 20 C -0.072 4.072 21 Cl -0.033 7.033 22 C -0.080 4.080 23 Cl -0.034 7.034 24 C -0.117 4.117 25 C -0.115 4.115 26 C -0.162 4.162 27 N -0.170 5.170 28 C -0.003 4.003 29 C -0.130 4.130 30 H 0.236 0.764 31 H 0.146 0.854 32 H -0.210 1.210 33 H -0.235 1.235 34 H 0.163 0.837 35 H 0.165 0.835 36 H 0.173 0.827 37 H 0.248 0.752 38 H 0.125 0.875 39 H 0.089 0.911 40 H 0.173 0.827 41 H 0.174 0.826 42 H 0.180 0.820 43 H 0.107 0.893 44 H 0.127 0.873 45 H 0.272 0.728 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.704 2.099 0.295 2.233 hybrid contribution -1.661 -1.068 0.297 1.997 sum -0.957 1.031 0.592 1.526 Atomic orbital electron populations 1.86571 1.18446 1.80360 1.50246 1.25199 0.83433 1.11615 0.98546 0.93955 0.90500 0.72145 0.76191 1.20079 0.98231 0.93751 0.96829 1.20683 1.00320 1.00659 0.94929 1.20627 0.97999 0.91832 0.97267 1.18446 1.03391 0.95614 0.96494 1.21104 1.02256 0.91065 1.00051 1.19967 1.03646 0.96161 0.90138 1.17244 0.78855 0.82143 0.84088 1.90868 1.43184 1.84308 1.25130 1.45429 1.52274 1.10195 1.26743 1.21951 0.98232 0.83121 0.95865 0.88664 1.23598 0.96409 0.97605 1.00316 1.21675 0.97461 0.89138 1.00307 0.86630 1.19894 0.96380 0.96229 0.92579 1.21155 0.99669 0.90896 1.00074 1.20986 1.03442 0.93699 0.89070 1.98405 1.85312 1.80885 1.38650 1.21048 1.05302 0.85366 0.96317 1.98403 1.96657 1.09799 1.98560 1.21315 0.98217 0.95661 0.96550 1.21399 0.98265 0.92272 0.99569 1.23421 0.96848 0.96964 0.98917 1.41768 1.44640 1.11284 1.19290 1.18431 1.00116 0.85166 0.96577 1.19986 1.02715 0.94353 0.95903 0.76448 0.85405 1.20996 1.23454 0.83700 0.83547 0.82712 0.75184 0.87526 0.91132 0.82747 0.82622 0.81970 0.89267 0.87260 0.72786 0.84662 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.19 12.76 -148.98 -1.90 -2.09 16 2 C -0.08 0.22 2.81 71.24 0.20 0.42 16 3 Si 0.77 -2.53 29.75 68.60 2.04 -0.49 16 4 C -0.09 0.16 5.40 -19.83 -0.11 0.05 16 5 C -0.15 0.35 8.59 22.01 0.19 0.54 16 6 C -0.06 0.04 10.06 22.30 0.22 0.27 16 7 C -0.13 -0.29 6.16 -21.36 -0.13 -0.42 16 8 C -0.12 -0.38 10.53 22.55 0.24 -0.14 16 9 C 0.01 0.01 6.96 39.91 0.28 0.29 16 10 C 0.59 1.09 7.80 86.56 0.68 1.77 16 11 O -0.56 -5.65 16.44 -4.20 -0.07 -5.71 16 12 N -0.70 4.10 5.26 -443.64 -2.33 1.77 16 13 C 0.11 -0.72 4.32 45.52 0.20 -0.53 16 14 H 0.10 -0.21 7.47 -2.39 -0.02 -0.23 16 15 C -0.14 1.10 7.25 31.12 0.23 1.33 16 16 C -0.07 0.68 3.86 -11.01 -0.04 0.64 16 17 H 0.12 -1.45 8.09 -2.39 -0.02 -1.47 16 18 C -0.05 0.32 5.29 -19.86 -0.11 0.21 16 19 C -0.10 0.33 9.49 22.28 0.21 0.54 16 20 C -0.04 -0.05 6.32 22.34 0.14 0.09 16 21 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.28 16 22 C -0.05 -0.08 6.32 22.35 0.14 0.06 16 23 Cl -0.06 -0.24 27.96 -2.72 -0.08 -0.31 16 24 C -0.10 0.29 9.83 22.29 0.22 0.51 16 25 C -0.10 0.61 8.60 22.27 0.19 0.80 16 26 C -0.12 1.29 7.29 31.12 0.23 1.52 16 27 N -0.56 2.09 6.07 -177.19 -1.08 1.01 16 28 C 0.11 0.01 7.25 39.13 0.28 0.30 16 29 C -0.11 0.13 9.61 22.37 0.22 0.35 16 30 H 0.39 -1.84 8.70 -74.05 -0.64 -2.48 16 31 H 0.13 -0.59 7.96 -2.39 -0.02 -0.61 16 32 H -0.28 -0.20 7.11 99.48 0.71 0.51 16 33 H -0.31 -1.47 7.11 99.48 0.71 -0.76 16 34 H 0.15 -0.91 4.82 -2.91 -0.01 -0.93 16 35 H 0.15 -0.67 8.06 -2.91 -0.02 -0.69 16 36 H 0.16 0.45 8.06 -2.91 -0.02 0.43 16 37 H 0.41 -4.92 7.76 -92.71 -0.72 -5.64 16 38 H 0.11 -0.97 6.32 -2.39 -0.02 -0.98 16 39 H 0.07 -0.38 8.14 -2.38 -0.02 -0.40 16 40 H 0.15 -1.04 8.05 -2.91 -0.02 -1.06 16 41 H 0.16 -0.92 8.06 -2.91 -0.02 -0.94 16 42 H 0.16 -1.79 6.67 -2.91 -0.02 -1.81 16 43 H 0.09 -1.03 8.14 -2.39 -0.02 -1.05 16 44 H 0.11 -1.20 7.72 -2.39 -0.02 -1.22 16 45 H 0.43 -4.58 8.12 -92.71 -0.75 -5.33 16 46 H 0.14 -0.45 8.06 -2.91 -0.02 -0.48 16 Total: 0.00 -21.68 414.36 -1.00 -22.68 By element: Atomic # 1 Polarization: -24.17 SS G_CDS: -0.98 Total: -25.15 kcal Atomic # 6 Polarization: 5.11 SS G_CDS: 3.47 Total: 8.58 kcal Atomic # 7 Polarization: 6.19 SS G_CDS: -3.41 Total: 2.78 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -1.97 Total: -7.81 kcal Atomic # 14 Polarization: -2.53 SS G_CDS: 2.04 Total: -0.49 kcal Atomic # 17 Polarization: -0.44 SS G_CDS: -0.15 Total: -0.59 kcal Total: -21.68 -1.00 -22.68 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.665 kcal (2) G-P(sol) polarization free energy of solvation -21.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.679 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds