Wall clock time and date at job start Mon Mar 8 2021 04:36:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.46942 * 2 1 4 4 C 1.50696 * 109.47347 * 120.00179 * 2 1 3 5 5 C 1.34709 * 125.66538 * 65.00321 * 4 2 1 6 6 C 1.40964 * 107.03104 * 180.02562 * 5 4 2 7 7 C 1.35943 * 106.74347 * 359.97438 * 6 5 4 8 8 C 1.47810 * 125.93173 * 180.02562 * 7 6 5 9 9 C 1.39805 * 120.00418 * 0.22942 * 8 7 6 10 10 C 1.37808 * 120.24856 * 180.27887 * 9 8 7 11 11 C 1.38777 * 120.24088 * 359.74584 * 10 9 8 12 12 O 1.35654 * 120.00114 * 180.02562 * 11 10 9 13 13 C 1.40250 * 120.00060 * 0.02562 * 11 10 9 14 14 C 1.47563 * 120.12485 * 180.02562 * 13 11 10 15 15 O 1.21582 * 119.99915 * 359.97438 * 14 13 11 16 16 N 1.34773 * 120.00107 * 179.97438 * 14 13 11 17 17 C 1.46502 * 120.00281 * 179.97438 * 16 14 13 18 18 H 1.08996 * 112.84481 * 334.67173 * 17 16 14 19 19 C 1.53778 * 113.61113 * 105.86549 * 17 16 14 20 20 C 1.54050 * 86.98671 * 89.16286 * 19 17 16 21 21 H 1.08996 * 113.69086 * 270.87399 * 20 19 17 22 22 C 1.50705 * 113.61687 * 139.97388 * 20 19 17 23 23 C 1.38199 * 119.97622 * 142.51140 * 22 20 19 24 24 C 1.38348 * 119.99848 * 179.97438 * 23 22 20 25 25 Cl 1.73600 * 120.01735 * 179.97438 * 24 23 22 26 26 C 1.38436 * 119.96405 * 359.97438 * 24 23 22 27 27 Cl 1.73599 * 120.02330 * 180.02562 * 26 24 23 28 28 C 1.38354 * 119.96074 * 0.02562 * 26 24 23 29 29 C 1.38211 * 119.99611 * 359.74316 * 28 26 24 30 30 C 1.53778 * 113.61508 * 203.47496 * 17 16 14 31 31 C 1.39214 * 119.99821 * 179.97438 * 8 7 6 32 32 O 1.34340 * 125.66707 * 245.33081 * 4 2 1 33 33 H 0.96698 * 113.99920 * 299.99361 * 1 2 3 34 34 H 1.08998 * 109.47058 * 240.00301 * 2 1 3 35 35 H 1.48497 * 110.00145 * 300.00199 * 3 2 1 36 36 H 1.48505 * 109.99679 * 61.32195 * 3 2 1 37 37 H 1.08002 * 126.48383 * 359.97438 * 5 4 2 38 38 H 1.08000 * 126.63514 * 180.02562 * 6 5 4 39 39 H 1.07999 * 119.87583 * 0.02845 * 9 8 7 40 40 H 1.07999 * 119.88362 * 179.77143 * 10 9 8 41 41 H 0.96696 * 114.00300 * 269.98175 * 12 11 10 42 42 H 0.97005 * 119.99754 * 0.02562 * 16 14 13 43 43 H 1.09007 * 113.61254 * 203.66607 * 19 17 16 44 44 H 1.09001 * 113.61609 * 334.57061 * 19 17 16 45 45 H 1.08000 * 120.00246 * 359.97438 * 23 22 20 46 46 H 1.07992 * 120.00247 * 179.97438 * 28 26 24 47 47 H 1.07997 * 119.97498 * 180.27695 * 29 28 26 48 48 H 1.08999 * 113.61612 * 25.42959 * 30 17 16 49 49 H 1.08999 * 113.61109 * 156.33804 * 30 17 16 50 50 H 1.08002 * 120.12473 * 0.02562 * 31 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7572 -2.0168 1.5092 6 6 2.3814 -2.2611 2.7492 7 6 2.9080 -1.0779 3.1625 8 6 3.6584 -0.8530 4.4159 9 6 3.8838 -1.9157 5.2960 10 6 4.5778 -1.7105 6.4688 11 6 5.0627 -0.4486 6.7823 12 8 5.7457 -0.2522 7.9378 13 6 4.8467 0.6237 5.9046 14 6 5.3616 1.9666 6.2350 15 8 5.9740 2.1451 7.2701 16 7 5.1529 2.9951 5.3895 17 6 5.6636 4.3285 5.7178 18 1 5.7880 4.4819 6.7897 19 6 6.8932 4.7381 4.8901 20 6 5.9052 5.3126 3.8571 21 1 5.5905 4.5907 3.1035 22 6 6.3485 6.6243 3.2622 23 6 6.1116 6.8922 1.9273 24 6 6.5179 8.0964 1.3807 25 17 6.2211 8.4332 -0.2962 26 6 7.1613 9.0327 2.1718 27 17 7.6713 10.5446 1.4877 28 6 7.3978 8.7628 3.5080 29 6 6.9869 7.5612 4.0535 30 6 4.9063 5.4682 5.0161 31 6 4.1453 0.4158 4.7176 32 8 2.6220 -0.1448 2.2343 33 1 -0.3933 0.4416 0.7651 34 1 1.7923 -0.5138 -0.8900 35 1 1.5614 2.4679 -1.2084 36 1 1.5878 2.4585 1.2243 37 1 1.2369 -2.7399 0.8986 38 1 2.4324 -3.2059 3.2701 39 1 3.5091 -2.9002 5.0579 40 1 4.7454 -2.5348 7.1461 41 1 5.1871 -0.0075 8.6882 42 1 4.6640 2.8528 4.5639 43 1 7.5111 5.4960 5.3718 44 1 7.4717 3.8919 4.5193 45 1 5.6092 6.1615 1.3107 46 1 7.9000 9.4926 4.1257 47 1 7.1676 7.3528 5.0976 48 1 3.8819 5.2110 4.7470 49 1 4.9820 6.4252 5.5322 50 1 3.9756 1.2374 4.0374 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:46 Heat of formation + Delta-G solvation = -17.168418 kcal Electronic energy + Delta-G solvation = -39576.242975 eV Core-core repulsion = 34168.759113 eV Total energy + Delta-G solvation = -5407.483861 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 460.072 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -43.77445 -41.94660 -41.19711 -40.00975 -38.85502 -38.26874 -37.86775 -37.53271 -37.40579 -34.75364 -34.22049 -32.86048 -32.61308 -32.15307 -31.35511 -30.12321 -26.92608 -26.66760 -26.47837 -25.28017 -24.19312 -23.70956 -23.13842 -22.71810 -21.95588 -21.27674 -20.41888 -19.64678 -19.24083 -18.70228 -18.35670 -17.75176 -17.54181 -17.29905 -17.11501 -16.85643 -16.65427 -16.48012 -16.35361 -16.02921 -15.89531 -15.66280 -15.43467 -15.29581 -15.17179 -14.89732 -14.64220 -14.41329 -14.37598 -14.04852 -13.91091 -13.84844 -13.76483 -13.64156 -13.46233 -13.29636 -13.19820 -13.02949 -12.96147 -12.88283 -12.48348 -12.42657 -12.14090 -11.95305 -11.92723 -11.87531 -11.72041 -11.43296 -11.13491 -10.87855 -10.85850 -10.53482 -10.38884 -10.14206 -10.06815 -9.65456 -8.98306 -5.10517 -0.63306 -0.30053 -0.19594 -0.03490 0.69991 0.81551 1.02631 1.18351 1.37659 1.42098 1.60666 1.83211 1.85944 1.91727 2.25195 2.55556 3.02136 3.07414 3.19514 3.21531 3.37742 3.39304 3.48627 3.52324 3.55033 3.71159 3.79567 3.81683 3.90651 3.91644 3.92688 4.06590 4.08503 4.23727 4.25296 4.30785 4.44056 4.50333 4.52749 4.53101 4.55482 4.66058 4.70104 4.72135 4.76237 4.81326 4.84584 4.92587 4.93744 4.94469 5.04113 5.08532 5.24674 5.33763 5.37418 5.44739 5.45921 5.89987 6.16132 6.33880 6.60681 7.12200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.696 3.304 4 C -0.049 4.049 5 C -0.169 4.169 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.033 4.033 9 C -0.052 4.052 10 C -0.148 4.148 11 C 0.181 3.819 12 O -0.475 6.475 13 C -0.165 4.165 14 C 0.564 3.436 15 O -0.513 6.513 16 N -0.713 5.713 17 C 0.122 3.878 18 H 0.108 0.892 19 C -0.143 4.143 20 C -0.076 4.076 21 H 0.103 0.897 22 C -0.054 4.054 23 C -0.096 4.096 24 C -0.028 4.028 25 Cl -0.047 7.047 26 C -0.036 4.036 27 Cl -0.048 7.048 28 C -0.094 4.094 29 C -0.101 4.101 30 C -0.136 4.136 31 C -0.054 4.054 32 O -0.166 6.166 33 H 0.380 0.620 34 H 0.137 0.863 35 H -0.248 1.248 36 H -0.254 1.254 37 H 0.154 0.846 38 H 0.155 0.845 39 H 0.140 0.860 40 H 0.146 0.854 41 H 0.400 0.600 42 H 0.400 0.600 43 H 0.098 0.902 44 H 0.079 0.921 45 H 0.142 0.858 46 H 0.144 0.856 47 H 0.140 0.860 48 H 0.079 0.921 49 H 0.101 0.899 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.812 -2.730 1.022 3.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.595 3.405 4 C -0.099 4.099 5 C -0.188 4.188 6 C -0.207 4.207 7 C -0.015 4.015 8 C -0.034 4.034 9 C -0.070 4.070 10 C -0.167 4.167 11 C 0.134 3.866 12 O -0.287 6.287 13 C -0.169 4.169 14 C 0.351 3.649 15 O -0.388 6.388 16 N -0.365 5.365 17 C 0.017 3.983 18 H 0.126 0.874 19 C -0.182 4.182 20 C -0.095 4.095 21 H 0.121 0.879 22 C -0.054 4.054 23 C -0.115 4.115 24 C -0.056 4.056 25 Cl -0.018 7.018 26 C -0.064 4.064 27 Cl -0.018 7.018 28 C -0.113 4.113 29 C -0.119 4.119 30 C -0.174 4.174 31 C -0.073 4.073 32 O -0.064 6.064 33 H 0.228 0.772 34 H 0.155 0.845 35 H -0.172 1.172 36 H -0.178 1.178 37 H 0.172 0.828 38 H 0.172 0.828 39 H 0.158 0.842 40 H 0.164 0.836 41 H 0.259 0.741 42 H 0.235 0.765 43 H 0.116 0.884 44 H 0.098 0.902 45 H 0.160 0.840 46 H 0.162 0.838 47 H 0.158 0.842 48 H 0.098 0.902 49 H 0.120 0.880 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.910 -1.711 0.707 2.063 hybrid contribution -1.714 -0.254 -0.004 1.732 sum -2.624 -1.965 0.703 3.352 Atomic orbital electron populations 1.86674 1.16672 1.80116 1.49209 1.24344 0.83995 1.12160 0.93909 0.94598 0.91351 0.73418 0.81142 1.22841 1.01252 0.93791 0.92044 1.21578 1.03627 0.95709 0.97866 1.21869 1.02707 0.98484 0.97603 1.20266 1.03020 0.87434 0.90781 1.17566 1.00192 0.94163 0.91454 1.21136 0.95478 0.98430 0.91985 1.21407 0.99333 0.97335 0.98592 1.18598 0.89262 0.90834 0.87918 1.84755 1.35209 1.90971 1.17751 1.20258 1.04693 0.94173 0.97728 1.17962 0.79545 0.83736 0.83624 1.90843 1.39491 1.83937 1.24571 1.45602 1.58283 1.08380 1.24260 1.21829 0.94445 0.81301 1.00769 0.87370 1.23634 0.96657 1.01495 0.96369 1.21722 0.97695 0.93596 0.96455 0.87875 1.19729 0.97142 0.95890 0.92643 1.20959 1.00174 0.95167 0.95196 1.20815 1.02244 0.95561 0.86967 1.98415 1.94429 1.95153 1.13756 1.20853 1.02226 0.89303 0.94011 1.98414 1.89250 1.29364 1.84811 1.21085 0.99723 0.98054 0.92444 1.21107 0.97626 0.92501 1.00679 1.23448 0.98770 0.99188 0.95945 1.21285 0.94369 0.96627 0.94975 1.83917 1.58131 1.37797 1.26510 0.77150 0.84502 1.17179 1.17797 0.82787 0.82779 0.84191 0.83597 0.74113 0.76469 0.88396 0.90244 0.83989 0.83834 0.84208 0.90224 0.88023 0.84737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.14 12.88 -35.23 -0.45 -0.32 16 2 C -0.03 0.05 2.98 36.00 0.11 0.16 16 3 Si 0.70 -1.45 32.11 -169.99 -5.46 -6.91 16 4 C -0.05 0.02 6.20 -35.56 -0.22 -0.20 16 5 C -0.17 0.04 10.78 -39.80 -0.43 -0.39 16 6 C -0.19 0.11 10.26 -39.37 -0.40 -0.29 16 7 C 0.03 -0.01 7.03 -36.49 -0.26 -0.26 16 8 C -0.03 0.03 5.87 -105.03 -0.62 -0.59 16 9 C -0.05 0.10 9.54 -39.15 -0.37 -0.28 16 10 C -0.15 0.21 9.96 -39.54 -0.39 -0.18 16 11 C 0.18 0.08 6.72 -38.63 -0.26 -0.18 16 12 O -0.48 -0.59 11.55 -40.61 -0.47 -1.06 16 13 C -0.16 -0.05 5.88 -104.89 -0.62 -0.67 16 14 C 0.56 0.78 7.76 -12.46 -0.10 0.69 16 15 O -0.51 -2.46 14.76 -16.66 -0.25 -2.71 16 16 N -0.71 1.11 5.21 -54.05 -0.28 0.83 16 17 C 0.12 -0.24 4.30 -67.12 -0.29 -0.53 16 18 H 0.11 -0.05 7.50 -51.93 -0.39 -0.44 16 19 C -0.14 0.36 7.27 -25.78 -0.19 0.18 16 20 C -0.08 0.26 3.87 -90.81 -0.35 -0.09 16 21 H 0.10 -0.45 8.09 -51.93 -0.42 -0.87 16 22 C -0.05 0.10 5.29 -104.63 -0.55 -0.45 16 23 C -0.10 0.09 9.49 -39.56 -0.38 -0.28 16 24 C -0.03 -0.02 6.32 -39.47 -0.25 -0.27 16 25 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 26 C -0.04 -0.03 6.32 -39.47 -0.25 -0.28 16 27 Cl -0.05 -0.08 27.96 -51.86 -1.45 -1.53 16 28 C -0.09 0.08 9.83 -39.55 -0.39 -0.31 16 29 C -0.10 0.21 8.59 -39.58 -0.34 -0.13 16 30 C -0.14 0.49 7.29 -25.92 -0.19 0.30 16 31 C -0.05 0.06 9.20 -38.77 -0.36 -0.30 16 32 O -0.17 0.02 8.80 4.58 0.04 0.06 16 33 H 0.38 -1.13 8.70 45.56 0.40 -0.74 16 34 H 0.14 -0.39 7.96 -51.93 -0.41 -0.80 16 35 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 36 H -0.25 0.01 7.11 56.52 0.40 0.41 16 37 H 0.15 -0.18 8.06 -52.49 -0.42 -0.60 16 38 H 0.15 -0.41 7.24 -52.49 -0.38 -0.79 16 39 H 0.14 -0.56 6.96 -52.49 -0.37 -0.92 16 40 H 0.15 -0.46 8.06 -52.49 -0.42 -0.88 16 41 H 0.40 -1.00 9.06 45.56 0.41 -0.59 16 42 H 0.40 -1.49 6.73 -40.82 -0.27 -1.76 16 43 H 0.10 -0.30 6.33 -51.92 -0.33 -0.63 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.14 -0.37 8.05 -52.49 -0.42 -0.79 16 46 H 0.14 -0.34 8.06 -52.49 -0.42 -0.76 16 47 H 0.14 -0.55 6.67 -52.49 -0.35 -0.91 16 48 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 49 H 0.10 -0.40 7.71 -51.93 -0.40 -0.80 16 50 H 0.13 -0.41 6.24 -52.49 -0.33 -0.74 16 LS Contribution 453.92 15.07 6.84 6.84 Total: 0.00 -9.74 453.92 -14.59 -24.34 By element: Atomic # 1 Polarization: -9.08 SS G_CDS: -4.58 Total: -13.66 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: -7.09 Total: -4.37 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.28 Total: 0.83 kcal Atomic # 8 Polarization: -2.90 SS G_CDS: -1.13 Total: -4.03 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.46 Total: -6.91 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -2.90 Total: -3.04 kcal Total LS contribution 6.84 Total: 6.84 kcal Total: -9.74 -14.59 -24.34 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.168 kcal (2) G-P(sol) polarization free energy of solvation -9.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.576 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.592 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.337 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds