Wall clock time and date at job start Mon Mar 8 2021 04:36:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.46942 * 2 1 4 4 C 1.50696 * 109.47347 * 120.00179 * 2 1 3 5 5 C 1.34709 * 125.66538 * 65.00321 * 4 2 1 6 6 C 1.40964 * 107.03104 * 180.02562 * 5 4 2 7 7 C 1.35943 * 106.74347 * 359.97438 * 6 5 4 8 8 C 1.47810 * 125.93173 * 180.02562 * 7 6 5 9 9 C 1.39805 * 120.00418 * 0.22942 * 8 7 6 10 10 C 1.37808 * 120.24856 * 180.27887 * 9 8 7 11 11 C 1.38777 * 120.24088 * 359.74584 * 10 9 8 12 12 O 1.35654 * 120.00114 * 180.02562 * 11 10 9 13 13 C 1.40250 * 120.00060 * 0.02562 * 11 10 9 14 14 C 1.47563 * 120.12485 * 180.02562 * 13 11 10 15 15 O 1.21582 * 119.99915 * 359.97438 * 14 13 11 16 16 N 1.34773 * 120.00107 * 179.97438 * 14 13 11 17 17 C 1.46502 * 120.00281 * 179.97438 * 16 14 13 18 18 H 1.08996 * 112.84481 * 334.67173 * 17 16 14 19 19 C 1.53778 * 113.61113 * 105.86549 * 17 16 14 20 20 C 1.54050 * 86.98671 * 89.16286 * 19 17 16 21 21 H 1.08996 * 113.69086 * 270.87399 * 20 19 17 22 22 C 1.50705 * 113.61687 * 139.97388 * 20 19 17 23 23 C 1.38199 * 119.97622 * 142.51140 * 22 20 19 24 24 C 1.38348 * 119.99848 * 179.97438 * 23 22 20 25 25 Cl 1.73600 * 120.01735 * 179.97438 * 24 23 22 26 26 C 1.38436 * 119.96405 * 359.97438 * 24 23 22 27 27 Cl 1.73599 * 120.02330 * 180.02562 * 26 24 23 28 28 C 1.38354 * 119.96074 * 0.02562 * 26 24 23 29 29 C 1.38211 * 119.99611 * 359.74316 * 28 26 24 30 30 C 1.53778 * 113.61508 * 203.47496 * 17 16 14 31 31 C 1.39214 * 119.99821 * 179.97438 * 8 7 6 32 32 O 1.34340 * 125.66707 * 245.33081 * 4 2 1 33 33 H 0.96698 * 113.99920 * 299.99361 * 1 2 3 34 34 H 1.08998 * 109.47058 * 240.00301 * 2 1 3 35 35 H 1.48497 * 110.00145 * 300.00199 * 3 2 1 36 36 H 1.48505 * 109.99679 * 61.32195 * 3 2 1 37 37 H 1.08002 * 126.48383 * 359.97438 * 5 4 2 38 38 H 1.08000 * 126.63514 * 180.02562 * 6 5 4 39 39 H 1.07999 * 119.87583 * 0.02845 * 9 8 7 40 40 H 1.07999 * 119.88362 * 179.77143 * 10 9 8 41 41 H 0.96696 * 114.00300 * 269.98175 * 12 11 10 42 42 H 0.97005 * 119.99754 * 0.02562 * 16 14 13 43 43 H 1.09007 * 113.61254 * 203.66607 * 19 17 16 44 44 H 1.09001 * 113.61609 * 334.57061 * 19 17 16 45 45 H 1.08000 * 120.00246 * 359.97438 * 23 22 20 46 46 H 1.07992 * 120.00247 * 179.97438 * 28 26 24 47 47 H 1.07997 * 119.97498 * 180.27695 * 29 28 26 48 48 H 1.08999 * 113.61612 * 25.42959 * 30 17 16 49 49 H 1.08999 * 113.61109 * 156.33804 * 30 17 16 50 50 H 1.08002 * 120.12473 * 0.02562 * 31 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7572 -2.0168 1.5092 6 6 2.3814 -2.2611 2.7492 7 6 2.9080 -1.0779 3.1625 8 6 3.6584 -0.8530 4.4159 9 6 3.8838 -1.9157 5.2960 10 6 4.5778 -1.7105 6.4688 11 6 5.0627 -0.4486 6.7823 12 8 5.7457 -0.2522 7.9378 13 6 4.8467 0.6237 5.9046 14 6 5.3616 1.9666 6.2350 15 8 5.9740 2.1451 7.2701 16 7 5.1529 2.9951 5.3895 17 6 5.6636 4.3285 5.7178 18 1 5.7880 4.4819 6.7897 19 6 6.8932 4.7381 4.8901 20 6 5.9052 5.3126 3.8571 21 1 5.5905 4.5907 3.1035 22 6 6.3485 6.6243 3.2622 23 6 6.1116 6.8922 1.9273 24 6 6.5179 8.0964 1.3807 25 17 6.2211 8.4332 -0.2962 26 6 7.1613 9.0327 2.1718 27 17 7.6713 10.5446 1.4877 28 6 7.3978 8.7628 3.5080 29 6 6.9869 7.5612 4.0535 30 6 4.9063 5.4682 5.0161 31 6 4.1453 0.4158 4.7176 32 8 2.6220 -0.1448 2.2343 33 1 -0.3933 0.4416 0.7651 34 1 1.7923 -0.5138 -0.8900 35 1 1.5614 2.4679 -1.2084 36 1 1.5878 2.4585 1.2243 37 1 1.2369 -2.7399 0.8986 38 1 2.4324 -3.2059 3.2701 39 1 3.5091 -2.9002 5.0579 40 1 4.7454 -2.5348 7.1461 41 1 5.1871 -0.0075 8.6882 42 1 4.6640 2.8528 4.5639 43 1 7.5111 5.4960 5.3718 44 1 7.4717 3.8919 4.5193 45 1 5.6092 6.1615 1.3107 46 1 7.9000 9.4926 4.1257 47 1 7.1676 7.3528 5.0976 48 1 3.8819 5.2110 4.7470 49 1 4.9820 6.4252 5.5322 50 1 3.9756 1.2374 4.0374 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:43 Heat of formation + Delta-G solvation = -12.784692 kcal Electronic energy + Delta-G solvation = -39576.052882 eV Core-core repulsion = 34168.759113 eV Total energy + Delta-G solvation = -5407.293769 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 460.072 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -43.68332 -41.86195 -41.09717 -39.94172 -38.83625 -38.19070 -37.81396 -37.56475 -37.40871 -34.74152 -34.13357 -32.77956 -32.49961 -32.04855 -31.25931 -30.02709 -26.70079 -26.54623 -26.37523 -25.17939 -24.08635 -23.60468 -23.05051 -22.62452 -21.87596 -21.20691 -20.30078 -19.54468 -19.17361 -18.61165 -18.28827 -17.69800 -17.45767 -17.17599 -17.03315 -16.77463 -16.57886 -16.36644 -16.28487 -15.97654 -15.78570 -15.60619 -15.39614 -15.20889 -15.07937 -14.77796 -14.50350 -14.35353 -14.31339 -13.94296 -13.80004 -13.75034 -13.56687 -13.52967 -13.34233 -13.19061 -13.10130 -12.94607 -12.91671 -12.87357 -12.41426 -12.35462 -12.12108 -11.95710 -11.90028 -11.80011 -11.58351 -11.26531 -11.05200 -10.91389 -10.77781 -10.46994 -10.30326 -10.04797 -9.98478 -9.59806 -8.89230 -4.95363 -0.54550 -0.19462 -0.12766 0.06639 0.78499 0.80323 1.16917 1.19983 1.48344 1.50439 1.71610 1.87805 1.93895 2.00342 2.35566 2.64209 3.12870 3.22742 3.31662 3.41264 3.50686 3.54031 3.65089 3.69529 3.70854 3.90308 3.92443 4.00365 4.03333 4.08130 4.10046 4.19886 4.22572 4.36552 4.38285 4.46346 4.62276 4.65959 4.67407 4.70305 4.77648 4.80270 4.84855 4.88380 4.90636 4.96411 5.02190 5.03984 5.08664 5.13455 5.17243 5.22561 5.38006 5.45666 5.52215 5.59234 5.60611 5.99570 6.35765 6.42639 6.74323 7.13607 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.040 4.040 3 Si 0.769 3.231 4 C -0.053 4.053 5 C -0.182 4.182 6 C -0.191 4.191 7 C 0.025 3.975 8 C -0.041 4.041 9 C -0.045 4.045 10 C -0.148 4.148 11 C 0.164 3.836 12 O -0.495 6.495 13 C -0.179 4.179 14 C 0.561 3.439 15 O -0.556 6.556 16 N -0.700 5.700 17 C 0.115 3.885 18 H 0.091 0.909 19 C -0.141 4.141 20 C -0.068 4.068 21 H 0.117 0.883 22 C -0.050 4.050 23 C -0.099 4.099 24 C -0.044 4.044 25 Cl -0.061 7.061 26 C -0.053 4.053 27 Cl -0.063 7.063 28 C -0.099 4.099 29 C -0.098 4.098 30 C -0.125 4.125 31 C -0.050 4.050 32 O -0.171 6.171 33 H 0.390 0.610 34 H 0.151 0.849 35 H -0.288 1.288 36 H -0.279 1.279 37 H 0.160 0.840 38 H 0.173 0.827 39 H 0.164 0.836 40 H 0.163 0.837 41 H 0.410 0.590 42 H 0.411 0.589 43 H 0.104 0.896 44 H 0.068 0.932 45 H 0.157 0.843 46 H 0.156 0.844 47 H 0.161 0.839 48 H 0.087 0.913 49 H 0.108 0.892 50 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.373 -3.912 1.004 4.684 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.149 4.149 3 Si 0.672 3.328 4 C -0.103 4.103 5 C -0.201 4.201 6 C -0.210 4.210 7 C -0.025 4.025 8 C -0.042 4.042 9 C -0.063 4.063 10 C -0.166 4.166 11 C 0.118 3.882 12 O -0.308 6.308 13 C -0.183 4.183 14 C 0.349 3.651 15 O -0.435 6.435 16 N -0.352 5.352 17 C 0.010 3.990 18 H 0.109 0.891 19 C -0.180 4.180 20 C -0.086 4.086 21 H 0.135 0.865 22 C -0.050 4.050 23 C -0.117 4.117 24 C -0.071 4.071 25 Cl -0.032 7.032 26 C -0.081 4.081 27 Cl -0.034 7.034 28 C -0.117 4.117 29 C -0.116 4.116 30 C -0.162 4.162 31 C -0.068 4.068 32 O -0.069 6.069 33 H 0.240 0.760 34 H 0.168 0.832 35 H -0.215 1.215 36 H -0.205 1.205 37 H 0.178 0.822 38 H 0.191 0.809 39 H 0.181 0.819 40 H 0.180 0.820 41 H 0.271 0.729 42 H 0.249 0.751 43 H 0.123 0.877 44 H 0.087 0.913 45 H 0.175 0.825 46 H 0.173 0.827 47 H 0.178 0.822 48 H 0.106 0.894 49 H 0.127 0.873 50 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -1.485 -2.895 0.671 3.322 hybrid contribution -1.588 0.079 0.030 1.590 sum -3.073 -2.815 0.701 4.226 Atomic orbital electron populations 1.86646 1.17397 1.80463 1.50017 1.24555 0.83496 1.12735 0.94106 0.93732 0.90224 0.71457 0.77434 1.23012 1.01143 0.93952 0.92155 1.21794 1.03964 0.96025 0.98332 1.22153 1.02168 0.99151 0.97508 1.20423 1.03416 0.87659 0.90972 1.17686 1.00393 0.94542 0.91556 1.21412 0.94476 0.99217 0.91229 1.21572 0.98965 0.97005 0.99056 1.18889 0.89781 0.91738 0.87831 1.84710 1.36402 1.91150 1.18576 1.20256 1.05758 0.93751 0.98530 1.18204 0.79024 0.84566 0.83317 1.90813 1.41687 1.84635 1.26398 1.45530 1.57516 1.08058 1.24125 1.21882 0.95523 0.81521 1.00101 0.89095 1.23630 0.96503 1.01343 0.96484 1.21731 0.97255 0.93090 0.96569 0.86469 1.19889 0.96547 0.96330 0.92254 1.21181 0.99947 0.94819 0.95801 1.20976 1.03293 0.96406 0.86444 1.98404 1.94579 1.95299 1.14889 1.21038 1.03262 0.88959 0.94798 1.98402 1.89490 1.30402 1.85137 1.21298 0.99704 0.98833 0.91910 1.21384 0.96677 0.91836 1.01663 1.23412 0.98935 0.98634 0.95258 1.21410 0.93608 0.97258 0.94562 1.83898 1.58284 1.38043 1.26657 0.76045 0.83207 1.21472 1.20524 0.82203 0.80938 0.81880 0.81991 0.72884 0.75095 0.87738 0.91300 0.82513 0.82674 0.82154 0.89430 0.87329 0.83178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.47 12.88 -148.98 -1.92 -1.44 16 2 C -0.04 0.15 2.98 71.23 0.21 0.36 16 3 Si 0.77 -3.43 32.11 68.60 2.20 -1.23 16 4 C -0.05 0.09 6.20 24.87 0.15 0.24 16 5 C -0.18 0.24 10.78 22.13 0.24 0.48 16 6 C -0.19 0.48 10.26 22.40 0.23 0.71 16 7 C 0.02 -0.03 7.03 24.27 0.17 0.14 16 8 C -0.04 0.11 5.87 -20.13 -0.12 -0.01 16 9 C -0.05 0.23 9.54 22.55 0.22 0.44 16 10 C -0.15 0.50 9.96 22.30 0.22 0.73 16 11 C 0.16 0.23 6.72 22.89 0.15 0.39 16 12 O -0.49 -1.86 11.55 -68.71 -0.79 -2.65 16 13 C -0.18 -0.19 5.88 -20.04 -0.12 -0.31 16 14 C 0.56 2.03 7.76 86.70 0.67 2.71 16 15 O -0.56 -6.28 14.76 17.01 0.25 -6.03 16 16 N -0.70 2.21 5.21 -443.19 -2.31 -0.10 16 17 C 0.12 -0.48 4.30 45.52 0.20 -0.28 16 18 H 0.09 -0.01 7.50 -2.39 -0.02 -0.03 16 19 C -0.14 0.80 7.27 31.21 0.23 1.03 16 20 C -0.07 0.56 3.87 -10.92 -0.04 0.52 16 21 H 0.12 -1.25 8.09 -2.39 -0.02 -1.27 16 22 C -0.05 0.25 5.29 -19.87 -0.11 0.15 16 23 C -0.10 0.26 9.49 22.29 0.21 0.47 16 24 C -0.04 -0.08 6.32 22.34 0.14 0.06 16 25 Cl -0.06 -0.22 27.96 -2.72 -0.08 -0.29 16 26 C -0.05 -0.11 6.32 22.34 0.14 0.03 16 27 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 28 C -0.10 0.21 9.83 22.29 0.22 0.43 16 29 C -0.10 0.51 8.59 22.27 0.19 0.70 16 30 C -0.12 1.06 7.29 31.12 0.23 1.28 16 31 C -0.05 0.13 9.20 22.79 0.21 0.34 16 32 O -0.17 0.19 8.80 -6.53 -0.06 0.13 16 33 H 0.39 -2.39 8.70 -74.06 -0.64 -3.04 16 34 H 0.15 -0.99 7.96 -2.39 -0.02 -1.01 16 35 H -0.29 -0.63 7.11 99.48 0.71 0.08 16 36 H -0.28 0.09 7.11 99.48 0.71 0.80 16 37 H 0.16 -0.50 8.06 -2.91 -0.02 -0.53 16 38 H 0.17 -1.25 7.24 -2.91 -0.02 -1.27 16 39 H 0.16 -1.66 6.96 -2.91 -0.02 -1.68 16 40 H 0.16 -1.17 8.06 -2.91 -0.02 -1.19 16 41 H 0.41 -1.38 9.06 -74.06 -0.67 -2.05 16 42 H 0.41 -3.39 6.73 -92.70 -0.62 -4.01 16 43 H 0.10 -0.74 6.33 -2.38 -0.02 -0.75 16 44 H 0.07 -0.21 8.14 -2.39 -0.02 -0.22 16 45 H 0.16 -0.98 8.05 -2.91 -0.02 -1.00 16 46 H 0.16 -0.79 8.06 -2.91 -0.02 -0.82 16 47 H 0.16 -1.55 6.67 -2.91 -0.02 -1.57 16 48 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 49 H 0.11 -1.02 7.71 -2.39 -0.02 -1.04 16 50 H 0.15 -1.05 6.24 -2.91 -0.02 -1.07 16 Total: 0.00 -23.93 453.92 0.04 -23.89 By element: Atomic # 1 Polarization: -21.69 SS G_CDS: -0.83 Total: -22.52 kcal Atomic # 6 Polarization: 6.95 SS G_CDS: 3.65 Total: 10.60 kcal Atomic # 7 Polarization: 2.21 SS G_CDS: -2.31 Total: -0.10 kcal Atomic # 8 Polarization: -7.48 SS G_CDS: -2.52 Total: -10.00 kcal Atomic # 14 Polarization: -3.43 SS G_CDS: 2.20 Total: -1.23 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -0.15 Total: -0.63 kcal Total: -23.93 0.04 -23.89 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.105 kcal (2) G-P(sol) polarization free energy of solvation -23.934 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.889 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.785 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds