Wall clock time and date at job start Mon Mar 8 2021 04:36:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47045 * 2 1 4 4 C 1.50698 * 109.47045 * 119.99927 * 2 1 3 5 5 C 1.38561 * 120.32726 * 245.02129 * 4 2 1 6 6 N 1.31516 * 120.90447 * 179.72056 * 5 4 2 7 7 C 1.32716 * 121.64027 * 0.53024 * 6 5 4 8 8 C 1.48180 * 119.72202 * 179.75223 * 7 6 5 9 9 O 1.21511 * 119.99834 * 179.72455 * 8 7 6 10 10 N 1.34779 * 119.99479 * 359.72353 * 8 7 6 11 11 C 1.46496 * 119.99390 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.91246 * 23.74616 * 11 10 8 13 13 C 1.53786 * 113.61518 * 154.99856 * 11 10 8 14 14 C 1.53781 * 87.17350 * 89.15486 * 13 11 10 15 15 H 1.08997 * 113.61223 * 270.84552 * 14 13 11 16 16 C 1.50703 * 113.61417 * 139.93966 * 14 13 11 17 17 C 1.38216 * 119.98054 * 299.72658 * 16 14 13 18 18 C 1.38247 * 120.03937 * 179.72702 * 17 16 14 19 19 C 1.38306 * 119.99627 * 0.54515 * 18 17 16 20 20 Cl 1.73604 * 120.01890 * 179.70662 * 19 18 17 21 21 C 1.38485 * 119.96251 * 359.72984 * 19 18 17 22 22 Cl 1.73603 * 120.02080 * 180.02562 * 21 19 18 23 23 C 1.38252 * 119.97838 * 120.00300 * 16 14 13 24 24 C 1.53782 * 87.08260 * 25.39213 * 14 13 11 25 25 C 1.39308 * 120.55685 * 359.46943 * 7 6 5 26 26 C 1.38586 * 119.05813 * 0.26312 * 25 7 6 27 27 H 0.96701 * 113.99736 * 299.99977 * 1 2 3 28 28 H 1.08997 * 109.46968 * 240.00204 * 2 1 3 29 29 H 1.48503 * 110.00155 * 178.68050 * 3 2 1 30 30 H 1.48499 * 110.00523 * 299.99869 * 3 2 1 31 31 H 1.08005 * 119.54373 * 359.97438 * 5 4 2 32 32 H 0.97001 * 120.00492 * 359.97438 * 10 8 7 33 33 H 1.09002 * 113.61357 * 334.56403 * 13 11 10 34 34 H 1.09002 * 113.61608 * 203.74565 * 13 11 10 35 35 H 1.08006 * 119.98258 * 0.02562 * 17 16 14 36 36 H 1.07998 * 120.00799 * 180.25717 * 18 17 16 37 37 H 1.07993 * 119.99932 * 359.97133 * 23 16 14 38 38 H 1.08997 * 113.61668 * 89.11298 * 24 14 13 39 39 H 1.08998 * 113.61674 * 219.93807 * 24 14 13 40 40 H 1.08003 * 120.46750 * 180.23462 * 25 7 6 41 41 H 1.07995 * 120.75923 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6407 -0.0171 2.1980 6 7 3.0796 -0.6245 3.2788 7 6 2.8725 -1.9195 3.4823 8 6 3.3908 -2.5620 4.7129 9 8 3.1997 -3.7462 4.9067 10 7 4.0742 -1.8327 5.6171 11 6 4.5871 -2.4679 6.8334 12 1 4.7289 -3.5430 6.7232 13 6 5.8013 -1.7455 7.4407 14 6 4.7999 -0.8987 8.2437 15 1 4.4765 0.0037 7.7249 16 6 5.2330 -0.6361 9.6630 17 6 5.4428 -1.6935 10.5280 18 6 5.8456 -1.4543 11.8287 19 6 6.0279 -0.1557 12.2683 20 17 6.5264 0.1456 13.9037 21 6 5.8123 0.9040 11.4033 22 17 6.0414 2.5346 11.9533 23 6 5.4147 0.6626 10.1008 24 6 3.8170 -2.0735 8.1069 25 6 2.1668 -2.6788 2.5515 26 6 1.6879 -2.0639 1.4056 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 3.5346 1.7703 0.0321 30 1 1.5616 2.4680 -1.2085 31 1 2.8323 1.0374 2.0646 32 1 4.2271 -0.8874 5.4622 33 1 6.3755 -1.1705 6.7142 34 1 6.4262 -2.3878 8.0612 35 1 5.2966 -2.7076 10.1862 36 1 6.0133 -2.2812 12.5029 37 1 5.2468 1.4885 9.4256 38 1 3.8984 -2.8066 8.9094 39 1 2.7890 -1.7632 7.9197 40 1 1.9958 -3.7317 2.7204 41 1 1.1370 -2.6261 0.6662 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:36:57 Heat of formation + Delta-G solvation = 16.702526 kcal Electronic energy + Delta-G solvation = -27888.147505 eV Core-core repulsion = 23594.286911 eV Total energy + Delta-G solvation = -4293.860594 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.053 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.01443 -41.35592 -40.27629 -39.04607 -37.85330 -37.55797 -37.42445 -34.78828 -33.62349 -32.96432 -32.12473 -31.44373 -28.00030 -26.68816 -26.18756 -25.02320 -24.20295 -23.86343 -22.72968 -22.01632 -20.24053 -19.34412 -18.61665 -18.43402 -17.70510 -17.17426 -16.86768 -16.66510 -16.55504 -16.37955 -16.18772 -15.95144 -15.62373 -15.38622 -15.18794 -14.91191 -14.65209 -14.50914 -14.33906 -14.21419 -13.71937 -13.58440 -13.53864 -13.34231 -12.93892 -12.91486 -12.54177 -12.41512 -12.35762 -12.18535 -11.94691 -11.84308 -11.57935 -11.47661 -11.26771 -11.05625 -10.69161 -10.56356 -10.34773 -10.06857 -9.97831 -9.59098 -5.00322 -0.60251 -0.11998 0.07356 0.07803 0.80992 1.20624 1.25379 1.52292 1.64805 1.91990 1.98885 2.36412 2.66033 2.93872 3.42969 3.43804 3.52637 3.54269 3.64656 3.68655 3.71809 3.79406 3.92396 3.94862 4.01619 4.11001 4.13100 4.20515 4.39087 4.41282 4.58079 4.61770 4.69553 4.77948 4.80707 4.88825 4.91386 4.96932 4.99924 5.03421 5.09288 5.15240 5.36420 5.39169 5.58908 5.60183 6.27317 6.60901 6.72075 7.04570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.070 4.070 3 Si 0.774 3.226 4 C -0.143 4.143 5 C 0.103 3.897 6 N -0.457 5.457 7 C 0.064 3.936 8 C 0.572 3.428 9 O -0.565 6.565 10 N -0.682 5.682 11 C 0.109 3.891 12 H 0.095 0.905 13 C -0.124 4.124 14 C -0.067 4.067 15 H 0.114 0.886 16 C -0.050 4.050 17 C -0.097 4.097 18 C -0.098 4.098 19 C -0.053 4.053 20 Cl -0.063 7.063 21 C -0.044 4.044 22 Cl -0.061 7.061 23 C -0.099 4.099 24 C -0.139 4.139 25 C -0.116 4.116 26 C -0.054 4.054 27 H 0.397 0.603 28 H 0.118 0.882 29 H -0.279 1.279 30 H -0.298 1.298 31 H 0.189 0.811 32 H 0.420 0.580 33 H 0.086 0.914 34 H 0.110 0.890 35 H 0.163 0.837 36 H 0.157 0.843 37 H 0.155 0.845 38 H 0.107 0.893 39 H 0.069 0.931 40 H 0.148 0.852 41 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.067 1.782 -2.306 3.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.180 4.180 3 Si 0.679 3.321 4 C -0.146 4.146 5 C -0.057 4.057 6 N -0.168 5.168 7 C -0.074 4.074 8 C 0.358 3.642 9 O -0.443 6.443 10 N -0.333 5.333 11 C 0.004 3.996 12 H 0.113 0.887 13 C -0.162 4.162 14 C -0.085 4.085 15 H 0.132 0.868 16 C -0.050 4.050 17 C -0.115 4.115 18 C -0.117 4.117 19 C -0.081 4.081 20 Cl -0.034 7.034 21 C -0.071 4.071 22 Cl -0.032 7.032 23 C -0.117 4.117 24 C -0.177 4.177 25 C -0.137 4.137 26 C -0.080 4.080 27 H 0.248 0.752 28 H 0.136 0.864 29 H -0.205 1.205 30 H -0.225 1.225 31 H 0.205 0.795 32 H 0.259 0.741 33 H 0.105 0.895 34 H 0.128 0.872 35 H 0.180 0.820 36 H 0.174 0.826 37 H 0.172 0.828 38 H 0.126 0.874 39 H 0.088 0.912 40 H 0.166 0.834 41 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -0.085 1.847 -2.234 2.900 hybrid contribution -0.229 -0.441 -0.544 0.737 sum -0.314 1.406 -2.778 3.129 Atomic orbital electron populations 1.86516 1.16684 1.82116 1.50588 1.25163 0.85606 1.10957 0.96272 0.93824 0.78141 0.74528 0.85613 1.21766 0.98815 0.95597 0.98372 1.23011 0.93601 1.00791 0.88253 1.67500 1.18398 1.08929 1.21992 1.21085 0.99597 0.90885 0.95788 1.18054 0.77953 0.85573 0.82636 1.90794 1.59249 1.16378 1.77902 1.45460 1.54065 1.14021 1.19728 1.22024 0.95686 0.98404 0.83463 0.88733 1.23408 0.95536 0.98343 0.98885 1.21642 0.97155 0.99072 0.90654 0.86807 1.19887 0.97066 0.91774 0.96275 1.21392 0.97374 1.00922 0.91834 1.21305 0.98643 0.94281 0.97469 1.21040 1.05410 0.94657 0.86951 1.98401 1.89612 1.96336 1.19060 1.20974 1.05444 0.85550 0.95166 1.98403 1.95427 1.19454 1.89918 1.21163 0.99074 0.98610 0.92884 1.23613 0.98742 0.97814 0.97581 1.22280 0.95657 1.02301 0.93476 1.21734 0.95608 0.94208 0.96455 0.75222 0.86443 1.20524 1.22534 0.79461 0.74149 0.89541 0.87182 0.82003 0.82584 0.82750 0.87440 0.91190 0.83388 0.82353 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.52 12.84 -148.98 -1.91 0.61 16 2 C -0.07 0.40 2.82 71.24 0.20 0.60 16 3 Si 0.77 -5.39 29.83 68.60 2.05 -3.35 16 4 C -0.14 0.62 5.37 -19.69 -0.11 0.52 16 5 C 0.10 -0.46 9.84 84.82 0.83 0.38 16 6 N -0.46 0.33 9.54 -184.90 -1.76 -1.43 16 7 C 0.06 0.14 6.75 41.91 0.28 0.42 16 8 C 0.57 2.52 7.81 86.89 0.68 3.20 16 9 O -0.56 -6.25 15.92 -3.75 -0.06 -6.31 16 10 N -0.68 1.09 5.25 -442.29 -2.32 -1.23 16 11 C 0.11 -0.41 4.33 45.58 0.20 -0.21 16 12 H 0.09 -0.02 7.47 -2.39 -0.02 -0.04 16 13 C -0.12 0.97 7.29 31.12 0.23 1.20 16 14 C -0.07 0.51 3.86 -11.01 -0.04 0.47 16 15 H 0.11 -1.05 8.10 -2.39 -0.02 -1.07 16 16 C -0.05 0.24 5.29 -19.87 -0.11 0.13 16 17 C -0.10 0.51 8.62 22.27 0.19 0.71 16 18 C -0.10 0.22 9.83 22.29 0.22 0.44 16 19 C -0.05 -0.11 6.32 22.34 0.14 0.03 16 20 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 21 C -0.04 -0.09 6.32 22.34 0.14 0.05 16 22 Cl -0.06 -0.23 27.96 -2.72 -0.08 -0.31 16 23 C -0.10 0.21 9.49 22.29 0.21 0.42 16 24 C -0.14 0.81 7.26 31.18 0.23 1.04 16 25 C -0.12 -0.11 9.63 22.61 0.22 0.11 16 26 C -0.05 0.13 9.83 22.45 0.22 0.35 16 27 H 0.40 -4.96 8.70 -74.06 -0.64 -5.61 16 28 H 0.12 -0.60 7.96 -2.39 -0.02 -0.62 16 29 H -0.28 0.68 7.11 99.48 0.71 1.38 16 30 H -0.30 -0.41 7.11 99.48 0.71 0.30 16 31 H 0.19 -1.92 4.92 -2.91 -0.01 -1.93 16 32 H 0.42 -2.06 8.03 -92.71 -0.74 -2.81 16 33 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 34 H 0.11 -1.01 7.73 -2.39 -0.02 -1.03 16 35 H 0.16 -1.62 6.64 -2.91 -0.02 -1.64 16 36 H 0.16 -0.83 8.06 -2.91 -0.02 -0.86 16 37 H 0.15 -0.81 8.05 -2.91 -0.02 -0.84 16 38 H 0.11 -0.83 6.29 -2.39 -0.02 -0.84 16 39 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 40 H 0.15 0.19 7.64 -2.91 -0.02 0.17 16 41 H 0.16 -0.82 8.06 -2.91 -0.02 -0.84 16 Total: 0.00 -19.10 378.14 -0.66 -19.75 By element: Atomic # 1 Polarization: -17.03 SS G_CDS: -0.23 Total: -17.25 kcal Atomic # 6 Polarization: 6.13 SS G_CDS: 3.74 Total: 9.86 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -4.09 Total: -2.66 kcal Atomic # 8 Polarization: -3.73 SS G_CDS: -1.97 Total: -5.71 kcal Atomic # 14 Polarization: -5.39 SS G_CDS: 2.05 Total: -3.35 kcal Atomic # 17 Polarization: -0.49 SS G_CDS: -0.15 Total: -0.65 kcal Total: -19.10 -0.66 -19.75 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.457 kcal (2) G-P(sol) polarization free energy of solvation -19.095 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.659 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.754 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.703 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds