Wall clock time and date at job start Mon Mar 8 2021 04:37:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86307 * 109.46819 * 2 1 4 4 C 1.50698 * 109.47046 * 119.99582 * 2 1 3 5 5 C 1.34849 * 125.90543 * 218.40515 * 4 2 1 6 6 C 1.40936 * 107.47205 * 180.23584 * 5 4 2 7 7 C 1.34854 * 107.46806 * 359.75536 * 6 5 4 8 8 N 1.36569 * 108.19707 * 0.02562 * 7 6 5 9 9 C 1.40201 * 125.66388 * 179.97438 * 8 7 6 10 10 C 1.38829 * 120.07041 * 56.09111 * 9 8 7 11 11 C 1.38113 * 119.93626 * 180.02562 * 10 9 8 12 12 C 1.38277 * 120.06500 * 0.02562 * 11 10 9 13 13 C 1.50707 * 119.93492 * 179.97438 * 12 11 10 14 14 C 1.50700 * 109.47297 * 89.99813 * 13 12 11 15 15 O 1.21279 * 119.99639 * 0.02562 * 14 13 12 16 16 N 1.34773 * 119.99788 * 179.97438 * 14 13 12 17 17 C 1.46507 * 119.99672 * 180.02562 * 16 14 13 18 18 H 1.09003 * 112.84951 * 336.20292 * 17 16 14 19 19 C 1.53779 * 113.61000 * 107.50570 * 17 16 14 20 20 C 1.53776 * 87.08022 * 89.11809 * 19 17 16 21 21 H 1.09003 * 113.68807 * 270.86752 * 20 19 17 22 22 C 1.50705 * 113.61419 * 139.98172 * 20 19 17 23 23 C 1.38201 * 119.97966 * 142.50251 * 22 20 19 24 24 C 1.38345 * 120.00071 * 179.97438 * 23 22 20 25 25 Cl 1.73594 * 120.02368 * 179.97438 * 24 23 22 26 26 C 1.38449 * 119.95839 * 359.97438 * 24 23 22 27 27 Cl 1.73603 * 120.01687 * 179.97438 * 26 24 23 28 28 C 1.38339 * 119.96199 * 0.02562 * 26 24 23 29 29 C 1.38209 * 120.00263 * 359.97438 * 28 26 24 30 30 C 1.53779 * 113.61545 * 205.00343 * 17 16 14 31 31 C 1.38276 * 120.13459 * 0.23723 * 12 11 10 32 32 C 1.38123 * 120.06076 * 359.48703 * 31 12 11 33 33 H 0.96705 * 114.00214 * 305.22200 * 1 2 3 34 34 H 1.08995 * 109.46848 * 239.99771 * 2 1 3 35 35 H 1.48501 * 109.99405 * 178.68291 * 3 2 1 36 36 H 1.48501 * 109.99748 * 299.99651 * 3 2 1 37 37 H 1.08007 * 126.25970 * 359.97438 * 5 4 2 38 38 H 1.07996 * 126.26781 * 179.72773 * 6 5 4 39 39 H 1.08000 * 125.90092 * 180.02562 * 7 6 5 40 40 H 1.08001 * 120.02734 * 0.03839 * 10 9 8 41 41 H 1.08004 * 119.96858 * 180.02562 * 11 10 9 42 42 H 1.09003 * 109.46590 * 330.00307 * 13 12 11 43 43 H 1.08993 * 109.47184 * 210.00450 * 13 12 11 44 44 H 0.96991 * 120.00235 * 0.02562 * 16 14 13 45 45 H 1.09000 * 113.61695 * 334.56572 * 19 17 16 46 46 H 1.09004 * 113.61415 * 203.66679 * 19 17 16 47 47 H 1.08006 * 120.00363 * 359.70023 * 23 22 20 48 48 H 1.08006 * 119.99969 * 180.02562 * 28 26 24 49 49 H 1.07998 * 119.98033 * 179.97438 * 29 28 26 50 50 H 1.08995 * 113.61659 * 156.33893 * 30 17 16 51 51 H 1.09001 * 113.68964 * 25.44095 * 30 17 16 52 52 H 1.07997 * 119.97054 * 179.73990 * 31 12 11 53 53 H 1.08007 * 120.03043 * 180.25008 * 32 31 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 3.0020 -0.3528 1.9684 6 6 3.1216 -1.2841 3.0194 7 6 2.1165 -2.1736 2.8884 8 7 1.3792 -1.8257 1.7927 9 6 0.2467 -2.5040 1.3206 10 6 -0.8401 -2.7112 2.1594 11 6 -1.9541 -3.3802 1.6916 12 6 -1.9876 -3.8440 0.3893 13 6 -3.2045 -4.5742 -0.1179 14 6 -4.1731 -3.5842 -0.7117 15 8 -3.9018 -2.4022 -0.7225 16 7 -5.3404 -4.0125 -1.2318 17 6 -6.2818 -3.0501 -1.8096 18 1 -6.1529 -2.0424 -1.4145 19 6 -6.3564 -3.1071 -3.3445 20 6 -7.4599 -4.1643 -3.1732 21 1 -7.0829 -5.1855 -3.1161 22 6 -8.5969 -4.0141 -4.1508 23 6 -9.2026 -5.1364 -4.6834 24 6 -10.2468 -4.9990 -5.5804 25 17 -11.0076 -6.4082 -6.2502 26 6 -10.6847 -3.7368 -5.9436 27 17 -11.9944 -3.5626 -7.0697 28 6 -10.0772 -2.6145 -5.4095 29 6 -9.0342 -2.7536 -4.5135 30 6 -7.7415 -3.5339 -1.7991 31 6 -0.9046 -3.6440 -0.4468 32 6 0.2100 -2.9706 0.0136 33 1 -0.3934 0.5095 0.7217 34 1 1.7923 -0.5139 -0.8899 35 1 3.5346 1.7703 0.0321 36 1 1.5615 2.4679 -1.2086 37 1 3.6516 0.4903 1.7848 38 1 3.8797 -1.2855 3.7885 39 1 1.9273 -3.0156 3.5378 40 1 -0.8143 -2.3493 3.1766 41 1 -2.8000 -3.5413 2.3435 42 1 -3.6832 -5.1000 0.7082 43 1 -2.9053 -5.2924 -0.8811 44 1 -5.5571 -4.9579 -1.2235 45 1 -5.4505 -3.4932 -3.8117 46 1 -6.7064 -2.1804 -3.7994 47 1 -8.8579 -6.1207 -4.4027 48 1 -10.4186 -1.6295 -5.6922 49 1 -8.5599 -1.8772 -4.0971 50 1 -8.4702 -2.7240 -1.8314 51 1 -7.9551 -4.2646 -1.0190 52 1 -0.9319 -4.0110 -1.4622 53 1 1.0540 -2.8111 -0.6412 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13287746.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:13 Heat of formation + Delta-G solvation = 65.464379 kcal Electronic energy + Delta-G solvation = -38374.773197 eV Core-core repulsion = 33231.735797 eV Total energy + Delta-G solvation = -5143.037399 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 457.100 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -42.67965 -41.66249 -40.73354 -39.80887 -38.89884 -37.71149 -37.57772 -37.43340 -34.84167 -34.45816 -32.24177 -32.13419 -31.89821 -31.27009 -31.03360 -27.96105 -26.67669 -26.11295 -26.03294 -24.12938 -23.94896 -23.54541 -22.65975 -21.63189 -21.43610 -20.61297 -20.16903 -19.24968 -18.65082 -18.01475 -17.49000 -17.22573 -17.05767 -17.04952 -16.64410 -16.38336 -16.15988 -15.86408 -15.79772 -15.55833 -15.39026 -15.25583 -15.15591 -14.84817 -14.68255 -14.51620 -14.46441 -14.38952 -14.21208 -13.92777 -13.75684 -13.56434 -13.41057 -13.35853 -13.22054 -12.96214 -12.93674 -12.90928 -12.60778 -12.39199 -12.34024 -12.17263 -12.03312 -11.96465 -11.94803 -11.82393 -11.55710 -11.25295 -10.97685 -10.74780 -10.23085 -10.03430 -9.99603 -9.97559 -9.60532 -9.22093 -9.08785 -4.99407 -0.13986 0.02791 0.05264 0.36501 0.79061 1.07191 1.18747 1.32445 1.62081 1.67176 1.84021 1.97315 2.09381 2.16209 2.34529 2.73720 3.38290 3.45482 3.53354 3.63696 3.67660 3.69383 3.70706 3.77596 3.89833 3.92693 3.99711 4.05626 4.09631 4.14732 4.18901 4.25740 4.33961 4.38494 4.39130 4.50124 4.53250 4.62908 4.65299 4.65975 4.68920 4.78809 4.83603 4.86972 4.91144 4.97864 4.99166 5.03277 5.08221 5.18100 5.20302 5.22975 5.23991 5.36876 5.40533 5.51776 5.58108 5.67130 5.81301 5.93296 6.17881 6.50981 6.60001 6.60334 7.32607 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.056 4.056 3 Si 0.804 3.196 4 C -0.020 4.020 5 C -0.203 4.203 6 C -0.200 4.200 7 C -0.014 4.014 8 N -0.395 5.395 9 C 0.119 3.881 10 C -0.120 4.120 11 C -0.094 4.094 12 C -0.066 4.066 13 C -0.098 4.098 14 C 0.515 3.485 15 O -0.575 6.575 16 N -0.703 5.703 17 C 0.116 3.884 18 H 0.083 0.917 19 C -0.144 4.144 20 C -0.065 4.065 21 H 0.119 0.881 22 C -0.050 4.050 23 C -0.098 4.098 24 C -0.044 4.044 25 Cl -0.061 7.061 26 C -0.053 4.053 27 Cl -0.063 7.063 28 C -0.100 4.100 29 C -0.099 4.099 30 C -0.124 4.124 31 C -0.099 4.099 32 C -0.111 4.111 33 H 0.387 0.613 34 H 0.099 0.901 35 H -0.277 1.277 36 H -0.292 1.292 37 H 0.150 0.850 38 H 0.155 0.845 39 H 0.181 0.819 40 H 0.136 0.864 41 H 0.148 0.852 42 H 0.136 0.864 43 H 0.130 0.870 44 H 0.418 0.582 45 H 0.068 0.932 46 H 0.098 0.902 47 H 0.157 0.843 48 H 0.155 0.845 49 H 0.159 0.841 50 H 0.101 0.899 51 H 0.091 0.909 52 H 0.136 0.864 53 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.344 -3.030 4.964 5.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.165 4.165 3 Si 0.707 3.293 4 C -0.130 4.130 5 C -0.228 4.228 6 C -0.224 4.224 7 C -0.142 4.142 8 N -0.068 5.068 9 C 0.029 3.971 10 C -0.139 4.139 11 C -0.113 4.113 12 C -0.067 4.067 13 C -0.138 4.138 14 C 0.302 3.698 15 O -0.453 6.453 16 N -0.355 5.355 17 C 0.010 3.990 18 H 0.101 0.899 19 C -0.182 4.182 20 C -0.083 4.083 21 H 0.137 0.863 22 C -0.051 4.051 23 C -0.117 4.117 24 C -0.071 4.071 25 Cl -0.032 7.032 26 C -0.081 4.081 27 Cl -0.034 7.034 28 C -0.118 4.118 29 C -0.117 4.117 30 C -0.162 4.162 31 C -0.117 4.117 32 C -0.130 4.130 33 H 0.235 0.765 34 H 0.116 0.884 35 H -0.203 1.203 36 H -0.220 1.220 37 H 0.168 0.832 38 H 0.173 0.827 39 H 0.198 0.802 40 H 0.154 0.846 41 H 0.166 0.834 42 H 0.154 0.846 43 H 0.148 0.852 44 H 0.255 0.745 45 H 0.087 0.913 46 H 0.116 0.884 47 H 0.175 0.825 48 H 0.172 0.828 49 H 0.177 0.823 50 H 0.120 0.880 51 H 0.110 0.890 52 H 0.154 0.846 53 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -1.055 -2.255 3.746 4.498 hybrid contribution -0.123 -1.035 -0.811 1.321 sum -1.178 -3.291 2.935 4.564 Atomic orbital electron populations 1.86539 1.17164 1.76727 1.54972 1.25009 0.85312 1.11479 0.94708 0.93037 0.78004 0.73945 0.84272 1.21213 0.99132 0.92220 1.00464 1.20977 0.99815 1.03606 0.98370 1.21180 1.01607 0.97488 1.02143 1.22367 0.95382 1.03541 0.92862 1.41563 1.21330 1.21172 1.22743 1.17726 0.87034 0.98088 0.94248 1.21150 0.92053 1.00381 1.00274 1.21113 0.97681 0.96776 0.95700 1.19578 0.94813 0.98511 0.93793 1.20770 0.91894 0.96930 1.04167 1.20972 0.82325 0.89382 0.77072 1.90774 1.76557 1.19796 1.58199 1.45581 1.18020 1.11477 1.60433 1.21784 0.89580 0.93830 0.93772 0.89886 1.23578 0.98618 0.99768 0.96250 1.21665 0.92376 1.00963 0.93331 0.86275 1.19934 0.96498 0.92035 0.96604 1.21171 0.93988 1.01123 0.95401 1.20988 0.98603 0.86987 1.00557 1.98404 1.80946 1.39345 1.84474 1.21031 0.94915 0.93989 0.98128 1.98402 1.47044 1.97939 1.60047 1.21295 0.95976 0.97812 0.96737 1.21381 0.95439 0.98568 0.96304 1.23386 0.94963 1.01604 0.96232 1.21016 0.92529 0.98228 0.99959 1.20930 0.99260 0.98286 0.94523 0.76459 0.88365 1.20310 1.21983 0.83230 0.82691 0.80229 0.84612 0.83430 0.84593 0.85196 0.74455 0.91295 0.88414 0.82542 0.82752 0.82338 0.88015 0.89022 0.84638 0.87165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.23 10.99 -148.98 -1.64 -4.86 16 2 C -0.06 -0.24 2.48 71.24 0.18 -0.06 16 3 Si 0.80 0.61 30.93 68.60 2.12 2.74 16 4 C -0.02 -0.12 6.12 41.04 0.25 0.13 16 5 C -0.20 -1.01 9.39 22.15 0.21 -0.80 16 6 C -0.20 -0.82 10.86 22.15 0.24 -0.58 16 7 C -0.01 -0.06 11.21 83.18 0.93 0.88 16 8 N -0.40 -2.35 2.84 -333.40 -0.95 -3.29 16 9 C 0.12 0.64 4.69 38.08 0.18 0.82 16 10 C -0.12 -0.28 9.77 22.38 0.22 -0.07 16 11 C -0.09 0.00 9.69 22.25 0.22 0.22 16 12 C -0.07 0.02 4.38 -19.84 -0.09 -0.07 16 13 C -0.10 0.72 5.83 29.10 0.17 0.89 16 14 C 0.51 -0.78 7.82 87.66 0.69 -0.10 16 15 O -0.57 -5.42 15.63 -3.03 -0.05 -5.47 16 16 N -0.70 5.29 5.26 -440.03 -2.32 2.97 16 17 C 0.12 -0.67 4.32 45.51 0.20 -0.48 16 18 H 0.08 -0.02 7.46 -2.39 -0.02 -0.04 16 19 C -0.14 0.95 7.25 31.12 0.23 1.18 16 20 C -0.07 0.62 3.86 -11.01 -0.04 0.57 16 21 H 0.12 -1.48 8.09 -2.39 -0.02 -1.50 16 22 C -0.05 0.28 5.29 -19.87 -0.11 0.17 16 23 C -0.10 0.30 9.49 22.29 0.21 0.51 16 24 C -0.04 -0.07 6.32 22.35 0.14 0.08 16 25 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.28 16 26 C -0.05 -0.10 6.32 22.34 0.14 0.04 16 27 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 28 C -0.10 0.21 9.83 22.29 0.22 0.43 16 29 C -0.10 0.51 8.61 22.27 0.19 0.71 16 30 C -0.12 1.21 7.29 31.12 0.23 1.44 16 31 C -0.10 -0.27 9.69 22.25 0.22 -0.05 16 32 C -0.11 -0.66 8.56 22.38 0.19 -0.47 16 33 H 0.39 -0.04 8.61 -74.05 -0.64 -0.67 16 34 H 0.10 0.57 7.96 -2.39 -0.02 0.55 16 35 H -0.28 -1.24 6.87 99.48 0.68 -0.56 16 36 H -0.29 -2.05 7.11 99.48 0.71 -1.34 16 37 H 0.15 0.37 6.43 -2.91 -0.02 0.35 16 38 H 0.16 0.05 8.06 -2.91 -0.02 0.03 16 39 H 0.18 -0.11 8.06 -2.91 -0.02 -0.14 16 40 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 41 H 0.15 -0.70 8.06 -2.91 -0.02 -0.72 16 42 H 0.14 -1.78 8.08 -2.39 -0.02 -1.80 16 43 H 0.13 -1.56 8.08 -2.39 -0.02 -1.58 16 44 H 0.42 -5.92 8.70 -92.71 -0.81 -6.72 16 45 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 46 H 0.10 -0.68 6.31 -2.39 -0.02 -0.69 16 47 H 0.16 -1.05 8.05 -2.91 -0.02 -1.07 16 48 H 0.15 -0.76 8.06 -2.91 -0.02 -0.79 16 49 H 0.16 -1.48 6.66 -2.91 -0.02 -1.50 16 50 H 0.10 -0.98 7.72 -2.39 -0.02 -1.00 16 51 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 52 H 0.14 -0.06 8.06 -2.91 -0.02 -0.09 16 53 H 0.11 0.78 8.06 -2.91 -0.02 0.76 16 Total: 0.00 -24.66 469.48 1.58 -23.07 By element: Atomic # 1 Polarization: -19.49 SS G_CDS: -0.45 Total: -19.94 kcal Atomic # 6 Polarization: 0.39 SS G_CDS: 5.00 Total: 5.39 kcal Atomic # 7 Polarization: 2.94 SS G_CDS: -3.26 Total: -0.32 kcal Atomic # 8 Polarization: -8.65 SS G_CDS: -1.68 Total: -10.33 kcal Atomic # 14 Polarization: 0.61 SS G_CDS: 2.12 Total: 2.74 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -0.15 Total: -0.62 kcal Total: -24.66 1.58 -23.07 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13287746.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.539 kcal (2) G-P(sol) polarization free energy of solvation -24.656 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.883 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.075 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds