Wall clock time and date at job start Mon Mar 8 2021 04:37:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86295 * 109.46779 * 2 1 4 4 C 1.50698 * 109.46983 * 119.99847 * 2 1 3 5 5 C 1.38350 * 120.35257 * 65.00007 * 4 2 1 6 6 C 1.40027 * 118.29580 * 180.02562 * 5 4 2 7 7 C 1.47839 * 120.56247 * 179.97438 * 6 5 4 8 8 O 1.21544 * 119.99993 * 359.97438 * 7 6 5 9 9 N 1.34776 * 119.99564 * 180.02562 * 7 6 5 10 10 C 1.46504 * 119.99581 * 180.02562 * 9 7 6 11 11 H 1.08997 * 112.84817 * 336.18259 * 10 9 7 12 12 C 1.53776 * 113.61892 * 107.49869 * 10 9 7 13 13 C 1.53775 * 87.08380 * 89.11110 * 12 10 9 14 14 H 1.08996 * 113.69638 * 270.87247 * 13 12 10 15 15 C 1.50706 * 113.61422 * 139.97826 * 13 12 10 16 16 C 1.38220 * 119.97979 * 142.50250 * 15 13 12 17 17 C 1.38245 * 120.03780 * 179.97438 * 16 15 13 18 18 C 1.38309 * 120.00110 * 359.97438 * 17 16 15 19 19 Cl 1.73600 * 120.01731 * 180.02562 * 18 17 16 20 20 C 1.38487 * 119.95831 * 0.02562 * 18 17 16 21 21 Cl 1.73599 * 120.01454 * 180.02562 * 20 18 17 22 22 C 1.38250 * 119.98128 * 322.23068 * 15 13 12 23 23 C 1.53781 * 87.08212 * 25.43316 * 13 12 10 24 24 C 1.39524 * 118.87421 * 0.25332 * 6 5 4 25 25 N 1.31694 * 120.56922 * 359.50068 * 24 6 5 26 26 C 1.31930 * 121.87785 * 0.49259 * 25 24 6 27 27 H 0.96693 * 113.99986 * 299.99692 * 1 2 3 28 28 H 1.08994 * 109.47283 * 239.99570 * 2 1 3 29 29 H 1.48506 * 109.99804 * 178.68021 * 3 2 1 30 30 H 1.48499 * 110.00153 * 299.99686 * 3 2 1 31 31 H 1.08008 * 120.85369 * 359.97438 * 5 4 2 32 32 H 0.96995 * 120.00482 * 359.97438 * 9 7 6 33 33 H 1.09007 * 113.61205 * 334.56074 * 12 10 9 34 34 H 1.08996 * 113.61321 * 203.66483 * 12 10 9 35 35 H 1.08005 * 119.97918 * 359.96036 * 16 15 13 36 36 H 1.08001 * 119.99776 * 179.97438 * 17 16 15 37 37 H 1.08004 * 119.99773 * 0.02562 * 22 15 13 38 38 H 1.09003 * 113.61408 * 89.11340 * 23 13 12 39 39 H 1.08993 * 113.61520 * 219.93410 * 23 13 12 40 40 H 1.07999 * 119.71408 * 179.74584 * 24 6 5 41 41 H 1.07997 * 119.45681 * 179.75322 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6887 -2.0611 1.4060 6 6 2.1747 -2.6776 2.5655 7 6 1.9436 -4.1182 2.8041 8 8 1.3269 -4.7777 1.9906 9 7 2.4161 -4.6999 3.9244 10 6 2.1876 -6.1276 4.1606 11 1 1.3202 -6.5118 3.6240 12 6 3.4499 -6.9896 3.9927 13 6 3.7282 -6.7329 5.4831 14 1 4.3195 -5.8366 5.6703 15 6 4.2495 -7.9417 6.2168 16 6 5.2153 -7.7930 7.1943 17 6 5.6939 -8.9009 7.8685 18 6 5.2060 -10.1591 7.5653 19 17 5.8063 -11.5506 8.4121 20 6 4.2383 -10.3080 6.5859 21 17 3.6243 -11.8865 6.2047 22 6 3.7573 -9.1980 5.9157 23 6 2.2144 -6.5178 5.6479 24 6 2.8755 -1.9080 3.4946 25 7 3.0852 -0.6257 3.2801 26 6 2.6395 -0.0185 2.1969 27 1 -0.3933 0.4416 0.7650 28 1 1.7924 -0.5139 -0.8899 29 1 3.5346 1.7703 0.0321 30 1 1.5615 2.4679 -1.2085 31 1 1.1378 -2.6253 0.6679 32 1 2.9079 -4.1735 4.5738 33 1 4.1935 -6.5501 3.3276 34 1 3.2382 -8.0334 3.7614 35 1 5.5964 -6.8106 7.4314 36 1 6.4489 -8.7840 8.6319 37 1 2.9997 -9.3130 5.1545 38 1 1.6649 -7.4328 5.8692 39 1 1.9605 -5.6984 6.3203 40 1 3.2528 -2.3688 4.3955 41 1 2.8305 1.0359 2.0626 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:19 Heat of formation + Delta-G solvation = 14.332966 kcal Electronic energy + Delta-G solvation = -27963.394769 eV Core-core repulsion = 23669.431423 eV Total energy + Delta-G solvation = -4293.963345 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.053 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.15219 -41.51687 -40.34958 -39.09965 -38.02421 -37.55055 -37.46456 -34.91102 -33.83474 -33.11861 -32.06808 -31.64761 -27.40211 -26.97484 -26.92700 -25.51916 -24.17594 -23.92473 -22.89305 -21.90885 -20.48871 -19.38947 -18.67431 -18.22373 -17.93590 -17.76294 -17.30301 -16.88616 -16.69976 -16.54771 -16.16962 -15.94882 -15.65594 -15.47571 -15.25069 -15.01544 -14.76575 -14.61706 -14.42791 -14.28015 -13.89825 -13.80300 -13.65199 -13.56503 -13.03121 -12.89866 -12.80772 -12.53108 -12.41328 -12.19542 -12.09068 -11.85202 -11.76230 -11.48395 -11.42183 -11.11420 -10.68372 -10.64064 -10.43947 -10.25765 -10.07798 -9.68432 -5.19915 -0.65984 -0.21423 -0.09628 -0.06623 0.79902 1.07889 1.16595 1.47994 1.62300 1.77395 1.86152 2.22734 2.54944 2.93061 3.17856 3.24659 3.30637 3.35125 3.43428 3.48345 3.52569 3.59231 3.66812 3.67740 3.84577 3.89126 4.01852 4.05342 4.10519 4.15400 4.35934 4.38666 4.48322 4.55896 4.60431 4.67620 4.74835 4.77004 4.81546 4.82329 4.86965 4.93068 5.19334 5.23249 5.36163 5.43340 6.20980 6.38628 6.54414 6.96573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.065 4.065 3 Si 0.687 3.313 4 C -0.179 4.179 5 C 0.012 3.988 6 C -0.189 4.189 7 C 0.569 3.431 8 O -0.524 6.524 9 N -0.708 5.708 10 C 0.120 3.880 11 H 0.110 0.890 12 C -0.145 4.145 13 C -0.075 4.075 14 H 0.104 0.896 15 C -0.055 4.055 16 C -0.099 4.099 17 C -0.095 4.095 18 C -0.036 4.036 19 Cl -0.047 7.047 20 C -0.028 4.028 21 Cl -0.046 7.046 22 C -0.098 4.098 23 C -0.135 4.135 24 C 0.140 3.860 25 N -0.477 5.477 26 C 0.130 3.870 27 H 0.381 0.619 28 H 0.120 0.880 29 H -0.253 1.253 30 H -0.248 1.248 31 H 0.152 0.848 32 H 0.401 0.599 33 H 0.078 0.922 34 H 0.098 0.902 35 H 0.139 0.861 36 H 0.144 0.856 37 H 0.144 0.856 38 H 0.101 0.899 39 H 0.081 0.919 40 H 0.161 0.839 41 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.722 5.090 3.480 6.208 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.587 3.413 4 C -0.181 4.181 5 C -0.014 4.014 6 C -0.194 4.194 7 C 0.355 3.645 8 O -0.400 6.400 9 N -0.360 5.360 10 C 0.015 3.985 11 H 0.128 0.872 12 C -0.183 4.183 13 C -0.094 4.094 14 H 0.122 0.878 15 C -0.055 4.055 16 C -0.117 4.117 17 C -0.114 4.114 18 C -0.064 4.064 19 Cl -0.018 7.018 20 C -0.055 4.055 21 Cl -0.016 7.016 22 C -0.116 4.116 23 C -0.173 4.173 24 C -0.019 4.019 25 N -0.185 5.185 26 C -0.026 4.026 27 H 0.228 0.772 28 H 0.137 0.863 29 H -0.177 1.177 30 H -0.172 1.172 31 H 0.170 0.830 32 H 0.237 0.763 33 H 0.097 0.903 34 H 0.116 0.884 35 H 0.157 0.843 36 H 0.162 0.838 37 H 0.161 0.839 38 H 0.120 0.880 39 H 0.100 0.900 40 H 0.178 0.822 41 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 1.305 5.100 2.570 5.858 hybrid contribution 0.040 -1.234 -0.290 1.268 sum 1.345 3.866 2.280 4.685 Atomic orbital electron populations 1.86555 1.16597 1.81646 1.49267 1.25034 0.85612 1.10330 0.96616 0.94884 0.81185 0.77146 0.88055 1.21441 1.01980 0.95438 0.99253 1.21646 0.91573 0.93271 0.94895 1.21011 1.05048 0.94934 0.98423 1.17994 0.78682 0.86343 0.81476 1.90830 1.39997 1.64490 1.44682 1.45547 1.57727 1.10070 1.22665 1.21881 0.99364 0.80198 0.97092 0.87174 1.23599 0.98212 1.01311 0.95202 1.21669 0.96519 0.95737 0.95429 0.87754 1.19722 0.95816 0.93917 0.96079 1.21150 0.96351 0.98958 0.95272 1.21097 1.00103 0.89857 1.00340 1.20857 0.98442 0.90105 0.96953 1.98416 1.86745 1.40639 1.75995 1.20796 0.98031 0.88378 0.98333 1.98419 1.86211 1.23690 1.93328 1.20901 1.00629 0.90130 0.99966 1.23456 0.94932 1.03210 0.95720 1.23021 0.92108 0.89539 0.97213 1.67722 1.19358 1.10512 1.20880 1.22887 0.91414 0.99876 0.88400 0.77199 0.86266 1.17726 1.17236 0.82993 0.76320 0.90288 0.88376 0.84339 0.83845 0.83876 0.88013 0.89994 0.82197 0.81974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.47 12.84 -35.23 -0.45 0.02 16 2 C -0.06 0.10 2.82 36.00 0.10 0.20 16 3 Si 0.69 -1.78 29.83 -169.99 -5.07 -6.86 16 4 C -0.18 0.19 5.35 -104.54 -0.56 -0.37 16 5 C 0.01 0.00 9.38 -38.87 -0.36 -0.36 16 6 C -0.19 0.05 5.89 -104.82 -0.62 -0.57 16 7 C 0.57 0.40 7.78 -12.33 -0.10 0.30 16 8 O -0.52 -2.45 16.02 5.33 0.09 -2.36 16 9 N -0.71 1.78 5.22 -53.96 -0.28 1.50 16 10 C 0.12 -0.29 4.32 -67.12 -0.29 -0.58 16 11 H 0.11 -0.07 7.46 -51.93 -0.39 -0.45 16 12 C -0.14 0.41 7.25 -25.92 -0.19 0.22 16 13 C -0.08 0.30 3.86 -90.96 -0.35 -0.05 16 14 H 0.10 -0.55 8.09 -51.93 -0.42 -0.97 16 15 C -0.05 0.12 5.29 -104.62 -0.55 -0.43 16 16 C -0.10 0.23 9.71 -39.59 -0.38 -0.15 16 17 C -0.10 0.10 9.83 -39.55 -0.39 -0.29 16 18 C -0.04 -0.03 6.32 -39.46 -0.25 -0.28 16 19 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 20 C -0.03 -0.02 6.32 -39.47 -0.25 -0.27 16 21 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 22 C -0.10 0.11 8.38 -39.55 -0.33 -0.22 16 23 C -0.14 0.54 7.29 -25.92 -0.19 0.35 16 24 C 0.14 -0.23 10.71 -17.13 -0.18 -0.41 16 25 N -0.48 0.11 10.35 -12.91 -0.13 -0.02 16 26 C 0.13 -0.17 9.84 -17.47 -0.17 -0.35 16 27 H 0.38 -1.84 8.70 45.56 0.40 -1.45 16 28 H 0.12 -0.14 7.96 -51.93 -0.41 -0.56 16 29 H -0.25 0.09 7.11 56.52 0.40 0.49 16 30 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 31 H 0.15 0.16 7.74 -52.48 -0.41 -0.24 16 32 H 0.40 -2.12 6.77 -40.82 -0.28 -2.39 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.10 -0.28 6.32 -51.93 -0.33 -0.61 16 35 H 0.14 -0.64 8.05 -52.48 -0.42 -1.06 16 36 H 0.14 -0.37 8.06 -52.49 -0.42 -0.79 16 37 H 0.14 -0.34 6.67 -52.48 -0.35 -0.69 16 38 H 0.10 -0.39 7.71 -51.93 -0.40 -0.79 16 39 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 40 H 0.16 -0.80 6.42 -52.49 -0.34 -1.14 16 41 H 0.16 -0.59 4.91 -52.49 -0.26 -0.85 16 LS Contribution 375.90 15.07 5.66 5.66 Total: 0.00 -8.80 375.90 -12.22 -21.03 By element: Atomic # 1 Polarization: -8.62 SS G_CDS: -4.07 Total: -12.68 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -5.07 Total: -3.25 kcal Atomic # 7 Polarization: 1.89 SS G_CDS: -0.42 Total: 1.48 kcal Atomic # 8 Polarization: -1.98 SS G_CDS: -0.37 Total: -2.34 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.07 Total: -6.86 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -2.90 Total: -3.04 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -8.80 -12.22 -21.03 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.358 kcal (2) G-P(sol) polarization free energy of solvation -8.801 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.557 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.025 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.333 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds