Wall clock time and date at job start Mon Mar 8 2021 04:37:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86295 * 109.46779 * 2 1 4 4 C 1.50698 * 109.46983 * 119.99847 * 2 1 3 5 5 C 1.38350 * 120.35257 * 65.00007 * 4 2 1 6 6 C 1.40027 * 118.29580 * 180.02562 * 5 4 2 7 7 C 1.47839 * 120.56247 * 179.97438 * 6 5 4 8 8 O 1.21544 * 119.99993 * 359.97438 * 7 6 5 9 9 N 1.34776 * 119.99564 * 180.02562 * 7 6 5 10 10 C 1.46504 * 119.99581 * 180.02562 * 9 7 6 11 11 H 1.08997 * 112.84817 * 336.18259 * 10 9 7 12 12 C 1.53776 * 113.61892 * 107.49869 * 10 9 7 13 13 C 1.53775 * 87.08380 * 89.11110 * 12 10 9 14 14 H 1.08996 * 113.69638 * 270.87247 * 13 12 10 15 15 C 1.50706 * 113.61422 * 139.97826 * 13 12 10 16 16 C 1.38220 * 119.97979 * 142.50250 * 15 13 12 17 17 C 1.38245 * 120.03780 * 179.97438 * 16 15 13 18 18 C 1.38309 * 120.00110 * 359.97438 * 17 16 15 19 19 Cl 1.73600 * 120.01731 * 180.02562 * 18 17 16 20 20 C 1.38487 * 119.95831 * 0.02562 * 18 17 16 21 21 Cl 1.73599 * 120.01454 * 180.02562 * 20 18 17 22 22 C 1.38250 * 119.98128 * 322.23068 * 15 13 12 23 23 C 1.53781 * 87.08212 * 25.43316 * 13 12 10 24 24 C 1.39524 * 118.87421 * 0.25332 * 6 5 4 25 25 N 1.31694 * 120.56922 * 359.50068 * 24 6 5 26 26 C 1.31930 * 121.87785 * 0.49259 * 25 24 6 27 27 H 0.96693 * 113.99986 * 299.99692 * 1 2 3 28 28 H 1.08994 * 109.47283 * 239.99570 * 2 1 3 29 29 H 1.48506 * 109.99804 * 178.68021 * 3 2 1 30 30 H 1.48499 * 110.00153 * 299.99686 * 3 2 1 31 31 H 1.08008 * 120.85369 * 359.97438 * 5 4 2 32 32 H 0.96995 * 120.00482 * 359.97438 * 9 7 6 33 33 H 1.09007 * 113.61205 * 334.56074 * 12 10 9 34 34 H 1.08996 * 113.61321 * 203.66483 * 12 10 9 35 35 H 1.08005 * 119.97918 * 359.96036 * 16 15 13 36 36 H 1.08001 * 119.99776 * 179.97438 * 17 16 15 37 37 H 1.08004 * 119.99773 * 0.02562 * 22 15 13 38 38 H 1.09003 * 113.61408 * 89.11340 * 23 13 12 39 39 H 1.08993 * 113.61520 * 219.93410 * 23 13 12 40 40 H 1.07999 * 119.71408 * 179.74584 * 24 6 5 41 41 H 1.07997 * 119.45681 * 179.75322 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6887 -2.0611 1.4060 6 6 2.1747 -2.6776 2.5655 7 6 1.9436 -4.1182 2.8041 8 8 1.3269 -4.7777 1.9906 9 7 2.4161 -4.6999 3.9244 10 6 2.1876 -6.1276 4.1606 11 1 1.3202 -6.5118 3.6240 12 6 3.4499 -6.9896 3.9927 13 6 3.7282 -6.7329 5.4831 14 1 4.3195 -5.8366 5.6703 15 6 4.2495 -7.9417 6.2168 16 6 5.2153 -7.7930 7.1943 17 6 5.6939 -8.9009 7.8685 18 6 5.2060 -10.1591 7.5653 19 17 5.8063 -11.5506 8.4121 20 6 4.2383 -10.3080 6.5859 21 17 3.6243 -11.8865 6.2047 22 6 3.7573 -9.1980 5.9157 23 6 2.2144 -6.5178 5.6479 24 6 2.8755 -1.9080 3.4946 25 7 3.0852 -0.6257 3.2801 26 6 2.6395 -0.0185 2.1969 27 1 -0.3933 0.4416 0.7650 28 1 1.7924 -0.5139 -0.8899 29 1 3.5346 1.7703 0.0321 30 1 1.5615 2.4679 -1.2085 31 1 1.1378 -2.6253 0.6679 32 1 2.9079 -4.1735 4.5738 33 1 4.1935 -6.5501 3.3276 34 1 3.2382 -8.0334 3.7614 35 1 5.5964 -6.8106 7.4314 36 1 6.4489 -8.7840 8.6319 37 1 2.9997 -9.3130 5.1545 38 1 1.6649 -7.4328 5.8692 39 1 1.9605 -5.6984 6.3203 40 1 3.2528 -2.3688 4.3955 41 1 2.8305 1.0359 2.0626 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:18 Heat of formation + Delta-G solvation = 16.372409 kcal Electronic energy + Delta-G solvation = -27963.306332 eV Core-core repulsion = 23669.431423 eV Total energy + Delta-G solvation = -4293.874909 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.053 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.06221 -41.36663 -40.30080 -39.03919 -37.92665 -37.57418 -37.45565 -34.87582 -33.76857 -33.01363 -31.94607 -31.52806 -27.29319 -26.80848 -26.71456 -25.40734 -24.05324 -23.83663 -22.76122 -21.84878 -20.31408 -19.30306 -18.56648 -18.10140 -17.84005 -17.67276 -17.16077 -16.79615 -16.56379 -16.47655 -16.13608 -15.86418 -15.56668 -15.35140 -15.19155 -14.89074 -14.66490 -14.49079 -14.37192 -14.21103 -13.75611 -13.63082 -13.47409 -13.44251 -12.95241 -12.90681 -12.71968 -12.43368 -12.29257 -12.18856 -12.04748 -11.83614 -11.58963 -11.46343 -11.27135 -11.08112 -10.60327 -10.56927 -10.35755 -10.12764 -9.97800 -9.60260 -5.02515 -0.57544 -0.11889 -0.03054 0.05691 0.79912 1.19989 1.22782 1.61917 1.64144 1.88444 1.98572 2.35980 2.63064 3.11299 3.38310 3.40477 3.45510 3.56307 3.62382 3.65879 3.66939 3.73434 3.76203 3.90771 4.06193 4.10586 4.11655 4.24129 4.26581 4.28235 4.47066 4.59306 4.71547 4.77335 4.80098 4.83991 4.86964 4.94735 4.97554 5.02051 5.04977 5.13807 5.31823 5.37840 5.55102 5.61874 6.35634 6.64725 6.71130 7.03761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.074 4.074 3 Si 0.784 3.216 4 C -0.177 4.177 5 C -0.004 4.004 6 C -0.197 4.197 7 C 0.567 3.433 8 O -0.575 6.575 9 N -0.689 5.689 10 C 0.113 3.887 11 H 0.086 0.914 12 C -0.146 4.146 13 C -0.063 4.063 14 H 0.130 0.870 15 C -0.052 4.052 16 C -0.092 4.092 17 C -0.100 4.100 18 C -0.053 4.053 19 Cl -0.064 7.064 20 C -0.045 4.045 21 Cl -0.063 7.063 22 C -0.102 4.102 23 C -0.124 4.124 24 C 0.149 3.851 25 N -0.492 5.492 26 C 0.132 3.868 27 H 0.397 0.603 28 H 0.110 0.890 29 H -0.277 1.277 30 H -0.296 1.296 31 H 0.134 0.866 32 H 0.418 0.582 33 H 0.072 0.928 34 H 0.094 0.906 35 H 0.170 0.830 36 H 0.157 0.843 37 H 0.150 0.850 38 H 0.099 0.901 39 H 0.098 0.902 40 H 0.196 0.804 41 H 0.185 0.815 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.667 7.133 5.153 8.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.184 4.184 3 Si 0.688 3.312 4 C -0.180 4.180 5 C -0.030 4.030 6 C -0.202 4.202 7 C 0.355 3.645 8 O -0.454 6.454 9 N -0.341 5.341 10 C 0.008 3.992 11 H 0.104 0.896 12 C -0.184 4.184 13 C -0.081 4.081 14 H 0.148 0.852 15 C -0.052 4.052 16 C -0.110 4.110 17 C -0.119 4.119 18 C -0.081 4.081 19 Cl -0.035 7.035 20 C -0.073 4.073 21 Cl -0.034 7.034 22 C -0.121 4.121 23 C -0.162 4.162 24 C -0.009 4.009 25 N -0.200 5.200 26 C -0.024 4.024 27 H 0.247 0.753 28 H 0.127 0.873 29 H -0.203 1.203 30 H -0.224 1.224 31 H 0.152 0.848 32 H 0.257 0.743 33 H 0.091 0.909 34 H 0.112 0.888 35 H 0.187 0.813 36 H 0.175 0.825 37 H 0.167 0.833 38 H 0.118 0.882 39 H 0.116 0.884 40 H 0.212 0.788 41 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges 2.258 7.131 4.308 8.632 hybrid contribution -0.273 -1.835 -0.868 2.048 sum 1.985 5.296 3.440 6.620 Atomic orbital electron populations 1.86515 1.17009 1.82194 1.50546 1.25243 0.85492 1.11500 0.96160 0.93793 0.78000 0.73852 0.85514 1.21431 1.02128 0.94841 0.99563 1.21651 0.92169 0.94015 0.95185 1.20987 1.05918 0.94530 0.98810 1.18197 0.78117 0.86617 0.81597 1.90807 1.42517 1.65574 1.46548 1.45400 1.56668 1.10157 1.21885 1.21893 0.98844 0.80136 0.98323 0.89550 1.23586 0.97680 1.00977 0.96201 1.21709 0.96741 0.95862 0.93832 0.85206 1.19922 0.95494 0.93840 0.95972 1.21508 0.95431 0.99824 0.94212 1.21357 1.00311 0.89441 1.00764 1.21056 0.99202 0.90340 0.97474 1.98402 1.86972 1.41757 1.76370 1.20955 0.98890 0.88105 0.99311 1.98405 1.86486 1.25065 1.93494 1.21069 1.00784 0.90291 0.99922 1.23401 0.94851 1.03615 0.94357 1.23489 0.90770 0.89029 0.97621 1.67816 1.19879 1.11032 1.21252 1.23220 0.90494 1.00823 0.87844 0.75284 0.87281 1.20337 1.22388 0.84829 0.74329 0.90912 0.88762 0.81300 0.82515 0.83273 0.88220 0.88393 0.78770 0.79820 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.62 12.84 -148.98 -1.91 -1.30 16 2 C -0.07 0.19 2.82 71.24 0.20 0.40 16 3 Si 0.78 -4.28 29.83 68.60 2.05 -2.24 16 4 C -0.18 0.34 5.35 -19.81 -0.11 0.24 16 5 C 0.00 -0.01 9.38 22.73 0.21 0.21 16 6 C -0.20 0.09 5.89 -19.99 -0.12 -0.03 16 7 C 0.57 1.12 7.78 86.78 0.68 1.79 16 8 O -0.57 -6.61 16.02 -3.85 -0.06 -6.67 16 9 N -0.69 4.08 5.22 -442.92 -2.31 1.77 16 10 C 0.11 -0.58 4.32 45.52 0.20 -0.38 16 11 H 0.09 0.02 7.46 -2.39 -0.02 0.01 16 12 C -0.15 0.90 7.25 31.12 0.23 1.12 16 13 C -0.06 0.64 3.86 -11.01 -0.04 0.60 16 14 H 0.13 -1.91 8.09 -2.39 -0.02 -1.93 16 15 C -0.05 0.32 5.29 -19.86 -0.11 0.22 16 16 C -0.09 0.65 9.71 22.27 0.22 0.87 16 17 C -0.10 0.33 9.83 22.29 0.22 0.55 16 18 C -0.05 -0.09 6.32 22.35 0.14 0.05 16 19 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 20 C -0.05 -0.09 6.32 22.34 0.14 0.06 16 21 Cl -0.06 -0.27 27.96 -2.72 -0.08 -0.35 16 22 C -0.10 0.24 8.38 22.29 0.19 0.43 16 23 C -0.12 1.21 7.29 31.12 0.23 1.43 16 24 C 0.15 -0.74 10.71 85.02 0.91 0.17 16 25 N -0.49 1.08 10.35 -194.75 -2.01 -0.94 16 26 C 0.13 -0.50 9.84 84.71 0.83 0.34 16 27 H 0.40 -3.84 8.70 -74.06 -0.64 -4.49 16 28 H 0.11 -0.11 7.96 -2.39 -0.02 -0.13 16 29 H -0.28 0.38 7.11 99.48 0.71 1.08 16 30 H -0.30 -0.77 7.11 99.48 0.71 -0.07 16 31 H 0.13 0.67 7.74 -2.91 -0.02 0.65 16 32 H 0.42 -5.48 6.77 -92.71 -0.63 -6.11 16 33 H 0.07 -0.33 8.14 -2.38 -0.02 -0.34 16 34 H 0.09 -0.50 6.32 -2.39 -0.02 -0.51 16 35 H 0.17 -2.24 8.05 -2.91 -0.02 -2.27 16 36 H 0.16 -1.02 8.06 -2.91 -0.02 -1.04 16 37 H 0.15 -0.65 6.67 -2.91 -0.02 -0.67 16 38 H 0.10 -0.86 7.71 -2.39 -0.02 -0.88 16 39 H 0.10 -1.20 8.14 -2.39 -0.02 -1.22 16 40 H 0.20 -2.57 6.42 -2.91 -0.02 -2.59 16 41 H 0.19 -1.67 4.91 -2.91 -0.01 -1.69 16 Total: 0.00 -23.66 375.90 -0.50 -24.16 By element: Atomic # 1 Polarization: -22.08 SS G_CDS: -0.11 Total: -22.19 kcal Atomic # 6 Polarization: 4.05 SS G_CDS: 4.02 Total: 8.07 kcal Atomic # 7 Polarization: 5.16 SS G_CDS: -4.33 Total: 0.83 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -1.97 Total: -7.97 kcal Atomic # 14 Polarization: -4.28 SS G_CDS: 2.05 Total: -2.24 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -0.15 Total: -0.68 kcal Total: -23.66 -0.50 -24.16 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.533 kcal (2) G-P(sol) polarization free energy of solvation -23.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.498 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.161 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds