Wall clock time and date at job start Mon Mar 8 2021 04:37:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86307 * 109.46898 * 2 1 4 4 C 1.50702 * 109.47035 * 240.00423 * 2 1 3 5 5 C 1.33740 * 125.11723 * 299.99442 * 4 2 1 6 6 C 1.37798 * 115.07826 * 179.97438 * 5 4 2 7 7 C 1.34974 * 114.70293 * 0.02562 * 6 5 4 8 8 C 1.47571 * 125.27378 * 180.02562 * 7 6 5 9 9 C 1.39823 * 119.99682 * 179.97438 * 8 7 6 10 10 C 1.36556 * 119.99839 * 179.97438 * 9 8 7 11 11 C 1.39825 * 120.00224 * 359.97438 * 10 9 8 12 12 C 1.47557 * 120.00250 * 179.97438 * 11 10 9 13 13 O 1.21592 * 120.00415 * 0.27146 * 12 11 10 14 14 N 1.34784 * 119.99905 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99971 * 179.97438 * 14 12 11 16 16 H 1.09000 * 112.84831 * 336.19762 * 15 14 12 17 17 C 1.53784 * 113.61633 * 107.50076 * 15 14 12 18 18 C 1.53778 * 87.07731 * 89.11577 * 17 15 14 19 19 H 1.08998 * 113.61801 * 270.88556 * 18 17 15 20 20 C 1.50700 * 113.68595 * 139.99416 * 18 17 15 21 21 C 1.38206 * 119.98181 * 142.46489 * 20 18 17 22 22 C 1.38340 * 120.00443 * 180.02562 * 21 20 18 23 23 Cl 1.73599 * 120.02423 * 179.97438 * 22 21 20 24 24 C 1.38446 * 119.95882 * 359.97438 * 22 21 20 25 25 Cl 1.73603 * 120.01906 * 179.97438 * 24 22 21 26 26 C 1.38350 * 119.96413 * 0.02562 * 24 22 21 27 27 C 1.38199 * 119.99584 * 359.72504 * 26 24 22 28 28 C 1.53776 * 113.61726 * 205.00181 * 15 14 12 29 29 C 1.39836 * 119.99507 * 0.25403 * 11 10 9 30 30 C 1.36557 * 119.99728 * 359.48917 * 29 11 10 31 31 S 1.75858 * 125.12157 * 120.27608 * 4 2 1 32 32 H 0.96702 * 114.00022 * 299.99383 * 1 2 3 33 33 H 1.09002 * 109.47641 * 120.00035 * 2 1 3 34 34 H 1.48499 * 110.00183 * 178.68568 * 3 2 1 35 35 H 1.48503 * 109.99895 * 300.00158 * 3 2 1 36 36 H 1.07998 * 122.46260 * 0.02562 * 5 4 2 37 37 H 1.08006 * 122.64718 * 179.97438 * 6 5 4 38 38 H 1.08002 * 119.99962 * 359.95118 * 9 8 7 39 39 H 1.08004 * 119.99608 * 180.02562 * 10 9 8 40 40 H 0.96999 * 120.00044 * 359.97438 * 14 12 11 41 41 H 1.08996 * 113.61761 * 203.66784 * 17 15 14 42 42 H 1.09003 * 113.61097 * 334.57240 * 17 15 14 43 43 H 1.08006 * 119.99759 * 0.02562 * 21 20 18 44 44 H 1.07992 * 120.00039 * 179.97438 * 26 24 22 45 45 H 1.08001 * 119.98207 * 180.29628 * 27 26 24 46 46 H 1.09001 * 113.61142 * 25.42617 * 28 15 14 47 47 H 1.08997 * 113.61750 * 156.33781 * 28 15 14 48 48 H 1.08000 * 119.99919 * 179.74591 * 29 11 10 49 49 H 1.08008 * 119.99937 * 180.25496 * 30 29 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.6721 -1.9846 -1.5429 6 6 2.2372 -2.4239 -2.7205 7 6 2.9666 -1.4967 -3.3764 8 6 3.6709 -1.7146 -4.6547 9 6 4.3969 -0.6723 -5.2393 10 6 5.0491 -0.8740 -6.4220 11 6 4.9915 -2.1229 -7.0481 12 6 5.6958 -2.3407 -8.3263 13 8 6.3304 -1.4356 -8.8327 14 7 5.6398 -3.5445 -8.9300 15 6 6.3386 -3.7606 -10.1993 16 1 6.5064 -2.8366 -10.7527 17 6 7.5936 -4.6398 -10.0697 18 6 6.6748 -5.8495 -10.3083 19 1 6.2467 -6.2599 -9.3938 20 6 7.2823 -6.9056 -11.1953 21 6 7.0556 -8.2432 -10.9314 22 6 7.6135 -9.2130 -11.7450 23 17 7.3296 -10.8933 -11.4137 24 6 8.3984 -8.8428 -12.8237 25 17 9.0999 -10.0586 -13.8453 26 6 8.6244 -7.5034 -13.0864 27 6 8.0620 -6.5358 -12.2756 28 6 5.7328 -4.8879 -11.0519 29 6 4.2615 -3.1638 -6.4657 30 6 3.6136 -2.9636 -5.2805 31 16 2.9523 0.0095 -2.4683 32 1 -0.3933 0.4416 0.7651 33 1 1.7924 -0.5138 0.8900 34 1 3.5345 1.7705 0.0320 35 1 1.5613 2.4680 -1.2085 36 1 1.0639 -2.6224 -0.9186 37 1 2.1073 -3.4307 -3.0891 38 1 4.4414 0.2923 -4.7557 39 1 5.6102 -0.0690 -6.8733 40 1 5.1368 -4.2677 -8.5240 41 1 8.3220 -4.4811 -10.8649 42 1 8.0399 -4.6199 -9.0754 43 1 6.4428 -8.5313 -10.0900 44 1 9.2369 -7.2140 -13.9274 45 1 8.2346 -5.4902 -12.4838 46 1 4.6769 -5.0684 -10.8505 47 1 5.9525 -4.7971 -12.1156 48 1 4.2136 -4.1273 -6.9514 49 1 3.0532 -3.7687 -4.8286 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:26 Heat of formation + Delta-G solvation = 42.613256 kcal Electronic energy + Delta-G solvation = -34987.512444 eV Core-core repulsion = 30025.373781 eV Total energy + Delta-G solvation = -4962.138663 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 460.045 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -41.84585 -41.01050 -40.05020 -39.22894 -38.76695 -37.57273 -37.45678 -37.39120 -34.84519 -33.52736 -32.39539 -32.10732 -31.48519 -30.52546 -27.47703 -26.70281 -26.21910 -24.74131 -24.13477 -23.97720 -23.44810 -22.72296 -21.87388 -20.29146 -20.18608 -19.14049 -18.64114 -18.48556 -18.27300 -17.31530 -17.10314 -17.02426 -16.62866 -16.25750 -16.18905 -16.06600 -15.77088 -15.59108 -15.47046 -15.21692 -15.07685 -14.95996 -14.73619 -14.66661 -14.41578 -14.29918 -14.15147 -13.80245 -13.56783 -13.46470 -13.34362 -13.25539 -13.15052 -12.95431 -12.92376 -12.69135 -12.42999 -12.38641 -12.35904 -12.17504 -11.96250 -11.84676 -11.83493 -11.58803 -11.28101 -11.17370 -10.87357 -10.36348 -10.25943 -10.15658 -9.99526 -9.72667 -9.60648 -9.10740 -5.26727 -0.97363 -0.13685 0.05796 0.16058 0.26980 0.31907 0.67716 0.79548 1.16546 1.19252 1.45971 1.55189 1.87405 1.89428 1.98329 2.34743 2.76067 3.31340 3.40117 3.41375 3.52796 3.62236 3.64348 3.68310 3.70813 3.76775 3.82369 3.91404 3.99581 4.09196 4.12761 4.19044 4.24313 4.33967 4.37041 4.43287 4.48669 4.54546 4.62329 4.68106 4.77250 4.82163 4.85124 4.88046 4.92949 4.95495 5.01822 5.02720 5.07661 5.12712 5.15475 5.20785 5.25019 5.36419 5.40708 5.57995 5.58603 5.66750 6.41939 6.83652 7.09457 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.035 4.035 3 Si 0.747 3.253 4 C -0.186 4.186 5 C -0.103 4.103 6 C -0.113 4.113 7 C -0.152 4.152 8 C 0.004 3.996 9 C -0.133 4.133 10 C -0.063 4.063 11 C -0.148 4.148 12 C 0.561 3.439 13 O -0.579 6.579 14 N -0.692 5.692 15 C 0.112 3.888 16 H 0.088 0.912 17 C -0.142 4.142 18 C -0.066 4.066 19 H 0.119 0.881 20 C -0.050 4.050 21 C -0.098 4.098 22 C -0.044 4.044 23 Cl -0.061 7.061 24 C -0.053 4.053 25 Cl -0.063 7.063 26 C -0.099 4.099 27 C -0.098 4.098 28 C -0.123 4.123 29 C -0.064 4.064 30 C -0.105 4.105 31 S 0.056 5.944 32 H 0.407 0.593 33 H 0.111 0.889 34 H -0.273 1.273 35 H -0.286 1.286 36 H 0.165 0.835 37 H 0.177 0.823 38 H 0.123 0.877 39 H 0.128 0.872 40 H 0.416 0.584 41 H 0.103 0.897 42 H 0.069 0.931 43 H 0.157 0.843 44 H 0.155 0.845 45 H 0.160 0.840 46 H 0.091 0.909 47 H 0.106 0.894 48 H 0.169 0.831 49 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.400 -1.151 5.999 7.528 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.148 4.148 3 Si 0.652 3.348 4 C -0.303 4.303 5 C -0.133 4.133 6 C -0.143 4.143 7 C -0.269 4.269 8 C 0.001 3.999 9 C -0.152 4.152 10 C -0.082 4.082 11 C -0.152 4.152 12 C 0.350 3.650 13 O -0.459 6.459 14 N -0.344 5.344 15 C 0.006 3.994 16 H 0.106 0.894 17 C -0.180 4.180 18 C -0.084 4.084 19 H 0.137 0.863 20 C -0.050 4.050 21 C -0.116 4.116 22 C -0.071 4.071 23 Cl -0.032 7.032 24 C -0.080 4.080 25 Cl -0.035 7.035 26 C -0.118 4.118 27 C -0.116 4.116 28 C -0.161 4.161 29 C -0.082 4.082 30 C -0.125 4.125 31 S 0.322 5.678 32 H 0.259 0.741 33 H 0.129 0.871 34 H -0.200 1.200 35 H -0.212 1.212 36 H 0.183 0.817 37 H 0.195 0.805 38 H 0.141 0.859 39 H 0.146 0.854 40 H 0.255 0.745 41 H 0.121 0.879 42 H 0.088 0.912 43 H 0.175 0.825 44 H 0.173 0.827 45 H 0.178 0.822 46 H 0.110 0.890 47 H 0.125 0.875 48 H 0.186 0.814 49 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -2.717 0.950 4.426 5.280 hybrid contribution -0.384 -2.047 -0.016 2.083 sum -3.101 -1.097 4.410 5.502 Atomic orbital electron populations 1.86452 1.16549 1.82333 1.51627 1.24016 0.86145 1.09433 0.95235 0.94132 0.78747 0.76415 0.85548 1.24090 1.06601 0.98327 1.01317 1.20293 1.00610 0.94669 0.97742 1.20738 0.97343 1.01444 0.94783 1.23188 1.06935 0.97123 0.99615 1.18481 0.95204 0.94926 0.91244 1.20972 0.98796 0.99062 0.96375 1.20914 0.96552 0.96820 0.93944 1.20031 1.02973 0.96003 0.96162 1.18387 0.79683 0.82528 0.84412 1.90790 1.44284 1.44098 1.66746 1.45445 1.52786 1.12769 1.23440 1.21914 0.93708 0.98952 0.84808 0.89382 1.23591 0.96762 0.94210 1.03486 1.21668 0.96950 0.91552 0.98229 0.86265 1.19900 0.96338 0.93125 0.95668 1.21169 0.99764 0.91160 0.99551 1.20981 1.01802 0.86772 0.97584 1.98404 1.95041 1.14932 1.94801 1.21039 1.00841 0.91506 0.94654 1.98402 1.82802 1.55319 1.66927 1.21293 1.00101 0.89310 1.01090 1.21387 0.95816 1.00836 0.93591 1.23412 1.00289 0.92342 1.00072 1.21303 0.93473 0.98791 0.94650 1.21219 0.99930 0.96034 0.95313 1.84469 1.50577 1.15863 1.16899 0.74145 0.87113 1.19955 1.21242 0.81718 0.80548 0.85918 0.85379 0.74495 0.87868 0.91200 0.82523 0.82729 0.82213 0.89001 0.87522 0.81351 0.81778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.14 12.83 -148.98 -1.91 -0.77 16 2 C -0.04 0.06 2.95 71.24 0.21 0.27 16 3 Si 0.75 -1.09 30.96 68.60 2.12 1.03 16 4 C -0.19 -0.66 5.76 24.66 0.14 -0.52 16 5 C -0.10 -0.11 10.00 21.14 0.21 0.10 16 6 C -0.11 0.02 9.64 21.41 0.21 0.22 16 7 C -0.15 -0.52 6.37 23.98 0.15 -0.37 16 8 C 0.00 0.01 5.88 -20.05 -0.12 -0.11 16 9 C -0.13 -0.61 9.54 22.26 0.21 -0.40 16 10 C -0.06 -0.33 9.53 22.26 0.21 -0.12 16 11 C -0.15 -0.28 5.88 -20.05 -0.12 -0.40 16 12 C 0.56 2.24 7.76 86.70 0.67 2.91 16 13 O -0.58 -7.57 15.93 -4.00 -0.06 -7.63 16 14 N -0.69 2.89 5.21 -443.17 -2.31 0.58 16 15 C 0.11 -0.50 4.32 45.52 0.20 -0.30 16 16 H 0.09 0.04 7.47 -2.39 -0.02 0.02 16 17 C -0.14 0.88 7.26 31.12 0.23 1.11 16 18 C -0.07 0.60 3.85 -11.01 -0.04 0.56 16 19 H 0.12 -1.44 8.09 -2.39 -0.02 -1.46 16 20 C -0.05 0.28 5.29 -19.86 -0.11 0.17 16 21 C -0.10 0.30 9.49 22.29 0.21 0.51 16 22 C -0.04 -0.06 6.32 22.34 0.14 0.08 16 23 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.28 16 24 C -0.05 -0.10 6.32 22.35 0.14 0.04 16 25 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 26 C -0.10 0.22 9.83 22.29 0.22 0.44 16 27 C -0.10 0.53 8.60 22.27 0.19 0.72 16 28 C -0.12 1.13 7.29 31.12 0.23 1.36 16 29 C -0.06 0.31 9.48 22.26 0.21 0.52 16 30 C -0.11 0.37 9.48 22.26 0.21 0.58 16 31 S 0.06 0.35 19.46 -56.49 -1.10 -0.75 16 32 H 0.41 -5.16 8.74 -74.06 -0.65 -5.81 16 33 H 0.11 -0.76 7.96 -2.39 -0.02 -0.77 16 34 H -0.27 -1.10 7.11 99.48 0.71 -0.39 16 35 H -0.29 -1.92 7.11 99.48 0.71 -1.21 16 36 H 0.17 -0.45 8.06 -2.91 -0.02 -0.47 16 37 H 0.18 -1.21 6.88 -2.91 -0.02 -1.23 16 38 H 0.12 0.56 7.26 -2.91 -0.02 0.54 16 39 H 0.13 0.88 7.64 -2.91 -0.02 0.86 16 40 H 0.42 -4.56 6.71 -92.71 -0.62 -5.18 16 41 H 0.10 -0.75 6.33 -2.39 -0.02 -0.76 16 42 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 43 H 0.16 -1.06 8.05 -2.91 -0.02 -1.08 16 44 H 0.16 -0.78 8.06 -2.91 -0.02 -0.81 16 45 H 0.16 -1.55 6.68 -2.91 -0.02 -1.57 16 46 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 47 H 0.11 -1.03 7.71 -2.39 -0.02 -1.05 16 48 H 0.17 -2.22 6.38 -2.91 -0.02 -2.24 16 49 H 0.16 -1.59 6.74 -2.91 -0.02 -1.61 16 Total: 0.00 -26.33 450.44 0.02 -26.30 By element: Atomic # 1 Polarization: -25.34 SS G_CDS: -0.18 Total: -25.51 kcal Atomic # 6 Polarization: 3.76 SS G_CDS: 3.61 Total: 7.37 kcal Atomic # 7 Polarization: 2.89 SS G_CDS: -2.31 Total: 0.58 kcal Atomic # 8 Polarization: -6.43 SS G_CDS: -1.98 Total: -8.40 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: 2.12 Total: 1.03 kcal Atomic # 16 Polarization: 0.35 SS G_CDS: -1.10 Total: -0.75 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -0.15 Total: -0.62 kcal Total: -26.33 0.02 -26.30 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.915 kcal (2) G-P(sol) polarization free energy of solvation -26.327 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.588 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.302 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds