Wall clock time and date at job start Mon Mar 8 2021 04:37:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.47316 * 2 1 4 4 C 1.50703 * 109.47194 * 120.00177 * 2 1 3 5 5 C 1.38059 * 119.80651 * 64.96960 * 4 2 1 6 6 C 1.38711 * 120.08376 * 179.76685 * 5 4 2 7 7 O 1.35655 * 120.14741 * 180.28251 * 6 5 4 8 8 C 1.40137 * 119.69562 * 0.48726 * 6 5 4 9 9 C 1.47540 * 120.18669 * 179.78719 * 8 6 5 10 10 O 1.21590 * 120.00144 * 359.73148 * 9 8 6 11 11 N 1.34772 * 120.00103 * 179.72226 * 9 8 6 12 12 C 1.46500 * 120.00149 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.90649 * 23.75701 * 12 11 9 14 14 C 1.53777 * 113.61088 * 155.00452 * 12 11 9 15 15 C 1.53781 * 87.08336 * 89.11940 * 14 12 11 16 16 H 1.09002 * 113.61228 * 270.88201 * 15 14 12 17 17 C 1.50701 * 113.61772 * 140.06093 * 15 14 12 18 18 C 1.38223 * 119.97855 * 121.52727 * 17 15 14 19 19 C 1.38250 * 120.03499 * 179.97438 * 18 17 15 20 20 C 1.38306 * 120.00225 * 0.02562 * 19 18 17 21 21 Cl 1.73595 * 120.02018 * 180.02562 * 20 19 18 22 22 C 1.38482 * 119.96057 * 359.97438 * 20 19 18 23 23 Cl 1.73603 * 120.02137 * 180.02562 * 22 20 19 24 24 C 1.38243 * 119.98162 * 301.25770 * 17 15 14 25 25 C 1.53775 * 113.61823 * 252.50051 * 12 11 9 26 26 C 1.39702 * 119.61883 * 359.52180 * 8 6 5 27 27 C 1.37786 * 119.91058 * 0.24597 * 26 8 6 28 28 H 0.96695 * 113.99646 * 59.99747 * 1 2 3 29 29 H 1.08998 * 109.46908 * 239.99562 * 2 1 3 30 30 H 1.48498 * 110.00019 * 298.68245 * 3 2 1 31 31 H 1.48500 * 109.99950 * 60.00017 * 3 2 1 32 32 H 1.07998 * 119.95273 * 0.02562 * 5 4 2 33 33 H 0.96696 * 113.99846 * 270.20437 * 7 6 5 34 34 H 0.96999 * 120.00148 * 0.02562 * 11 9 8 35 35 H 1.08997 * 113.61941 * 334.56647 * 14 12 11 36 36 H 1.09005 * 113.61136 * 203.66812 * 14 12 11 37 37 H 1.08000 * 119.98487 * 359.96252 * 18 17 15 38 38 H 1.08007 * 119.99788 * 179.97438 * 19 18 17 39 39 H 1.08000 * 119.99881 * 359.97438 * 24 17 15 40 40 H 1.08993 * 113.61636 * 156.33149 * 25 12 11 41 41 H 1.09008 * 113.61006 * 25.43391 * 25 12 11 42 42 H 1.08003 * 120.04076 * 180.22890 * 26 8 6 43 43 H 1.08001 * 119.84931 * 180.02562 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 1.6823 -2.0585 1.3943 6 6 2.1461 -2.7192 2.5223 7 8 1.9071 -4.0449 2.6819 8 6 2.8591 -2.0099 3.4983 9 6 3.3535 -2.7009 4.7045 10 8 3.1384 -3.8879 4.8564 11 7 4.0436 -2.0163 5.6381 12 6 4.5349 -2.7025 6.8355 13 1 4.6572 -3.7757 6.6894 14 6 5.7578 -2.0247 7.4757 15 6 4.7645 -1.1871 8.2984 16 1 4.4617 -0.2623 7.8073 17 6 5.1907 -0.9779 9.7286 18 6 5.3603 0.3035 10.2184 19 6 5.7508 0.4968 11.5304 20 6 5.9725 -0.5923 12.3536 21 17 6.4621 -0.3502 14.0014 22 6 5.8026 -1.8761 11.8629 23 17 6.0798 -3.2442 12.8950 24 6 5.4065 -2.0675 10.5516 25 6 3.7624 -2.3390 8.1145 26 6 3.1039 -0.6461 3.3197 27 6 2.6399 -0.0068 2.1908 28 1 -0.3932 0.4417 -0.7650 29 1 1.7923 -0.5139 -0.8899 30 1 1.5880 2.4585 -1.2242 31 1 1.5616 2.4679 1.2085 32 1 1.1291 -2.6001 0.6413 33 1 1.0816 -4.2427 3.1451 34 1 4.2150 -1.0693 5.5171 35 1 6.3484 -1.4363 6.7736 36 1 6.3648 -2.6994 8.0794 37 1 5.1879 1.1541 9.5757 38 1 5.8835 1.4983 11.9124 39 1 5.2692 -3.0683 10.1696 40 1 3.8237 -3.0996 8.8927 41 1 2.7419 -2.0043 7.9279 42 1 3.6559 -0.0937 4.0658 43 1 2.8301 1.0474 2.0536 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:32 Heat of formation + Delta-G solvation = -33.545842 kcal Electronic energy + Delta-G solvation = -30260.828602 eV Core-core repulsion = 25711.532794 eV Total energy + Delta-G solvation = -4549.295807 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.057 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.88492 -41.16728 -40.04741 -38.96650 -38.32989 -37.56649 -37.42805 -37.27927 -34.69321 -32.86011 -31.93563 -31.47970 -31.09566 -27.69205 -26.69116 -26.13313 -24.16935 -23.84121 -23.52407 -22.65700 -21.71335 -20.27584 -19.29241 -18.79401 -18.59497 -18.40947 -17.56912 -17.12350 -16.74556 -16.63598 -16.46117 -16.24510 -15.95769 -15.63011 -15.54980 -15.34772 -15.15938 -15.02328 -14.74571 -14.33114 -14.07224 -13.97640 -13.75259 -13.57820 -13.44908 -13.27561 -12.94887 -12.94135 -12.89047 -12.54218 -12.39696 -12.27056 -12.13100 -12.03157 -11.81160 -11.62680 -11.55842 -11.23982 -10.91055 -10.55560 -10.20887 -9.99904 -9.95050 -9.76064 -9.59156 -4.89118 -0.40006 -0.10996 0.06558 0.16853 0.80650 1.20710 1.28576 1.64013 1.71071 1.97602 2.02346 2.36851 2.55518 3.15102 3.28304 3.42979 3.56660 3.61079 3.64006 3.69891 3.75511 3.82615 3.93752 4.07214 4.12491 4.12873 4.25654 4.28198 4.29522 4.32581 4.59935 4.64710 4.73506 4.77464 4.79064 4.85277 4.89065 4.99541 5.02900 5.03719 5.05937 5.13957 5.19205 5.28193 5.40718 5.58303 5.60666 5.64415 6.49483 6.55097 6.70743 7.19178 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.099 4.099 3 Si 0.777 3.223 4 C -0.035 4.035 5 C -0.142 4.142 6 C 0.152 3.848 7 O -0.497 6.497 8 C -0.180 4.180 9 C 0.559 3.441 10 O -0.564 6.564 11 N -0.693 5.693 12 C 0.115 3.885 13 H 0.082 0.918 14 C -0.125 4.125 15 C -0.062 4.062 16 H 0.130 0.870 17 C -0.052 4.052 18 C -0.092 4.092 19 C -0.100 4.100 20 C -0.053 4.053 21 Cl -0.064 7.064 22 C -0.045 4.045 23 Cl -0.064 7.064 24 C -0.102 4.102 25 C -0.145 4.145 26 C -0.050 4.050 27 C -0.134 4.134 28 H 0.397 0.603 29 H 0.095 0.905 30 H -0.291 1.291 31 H -0.284 1.284 32 H 0.134 0.866 33 H 0.406 0.594 34 H 0.416 0.584 35 H 0.097 0.903 36 H 0.098 0.902 37 H 0.170 0.830 38 H 0.158 0.842 39 H 0.149 0.851 40 H 0.092 0.908 41 H 0.072 0.928 42 H 0.174 0.826 43 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.814 8.569 -4.698 9.940 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.207 4.207 3 Si 0.681 3.319 4 C -0.036 4.036 5 C -0.161 4.161 6 C 0.105 3.895 7 O -0.310 6.310 8 C -0.184 4.184 9 C 0.348 3.652 10 O -0.443 6.443 11 N -0.346 5.346 12 C 0.009 3.991 13 H 0.101 0.899 14 C -0.163 4.163 15 C -0.080 4.080 16 H 0.148 0.852 17 C -0.052 4.052 18 C -0.110 4.110 19 C -0.118 4.118 20 C -0.081 4.081 21 Cl -0.035 7.035 22 C -0.073 4.073 23 Cl -0.035 7.035 24 C -0.121 4.121 25 C -0.184 4.184 26 C -0.069 4.069 27 C -0.152 4.152 28 H 0.248 0.752 29 H 0.113 0.887 30 H -0.219 1.219 31 H -0.211 1.211 32 H 0.152 0.848 33 H 0.266 0.734 34 H 0.255 0.745 35 H 0.115 0.885 36 H 0.116 0.884 37 H 0.187 0.813 38 H 0.175 0.825 39 H 0.166 0.834 40 H 0.111 0.889 41 H 0.090 0.910 42 H 0.191 0.809 43 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 2.147 8.047 -4.069 9.269 hybrid contribution -1.689 -0.495 0.160 1.768 sum 0.458 7.552 -3.909 8.516 Atomic orbital electron populations 1.86536 1.18244 1.80921 1.51140 1.25245 0.84404 1.12857 0.98168 0.93986 0.89957 0.71049 0.76899 1.19611 0.95673 0.92951 0.95327 1.21354 1.01439 0.94747 0.98536 1.18744 0.94831 0.83281 0.92611 1.84711 1.47022 1.19007 1.80288 1.20433 1.06462 0.95584 0.95897 1.18268 0.77927 0.86169 0.82855 1.90816 1.58135 1.16673 1.78664 1.45405 1.55599 1.13654 1.19972 1.21836 0.95760 0.97559 0.83950 0.89942 1.23400 0.95510 0.98819 0.98569 1.21691 0.96556 0.99567 0.90200 0.85219 1.19924 0.97083 0.92243 0.95957 1.21510 0.96998 0.97934 0.94508 1.21358 0.98537 0.98232 0.93713 1.21053 1.05517 0.93763 0.87756 1.98401 1.89880 1.97047 1.18163 1.20954 1.05561 0.87339 0.93399 1.98404 1.94724 1.42961 1.67374 1.21063 0.99253 1.01377 0.90378 1.23574 0.98992 0.98400 0.97390 1.21487 0.96346 0.91310 0.97735 1.21237 0.99280 1.01104 0.93552 0.75232 0.88699 1.21858 1.21136 0.84832 0.73422 0.74485 0.88481 0.88359 0.81258 0.82473 0.83365 0.88916 0.90962 0.80897 0.82226 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.26 12.81 -148.98 -1.91 -1.65 16 2 C -0.10 0.37 2.78 71.24 0.20 0.57 16 3 Si 0.78 -5.10 29.83 68.60 2.05 -3.05 16 4 C -0.04 0.03 5.39 -19.83 -0.11 -0.08 16 5 C -0.14 -0.40 9.60 22.34 0.21 -0.18 16 6 C 0.15 0.78 6.72 22.84 0.15 0.93 16 7 O -0.50 -3.96 11.58 -68.79 -0.80 -4.76 16 8 C -0.18 -0.30 5.89 -20.01 -0.12 -0.41 16 9 C 0.56 2.28 7.76 86.70 0.67 2.95 16 10 O -0.56 -7.45 14.76 16.92 0.25 -7.20 16 11 N -0.69 2.98 5.21 -443.22 -2.31 0.67 16 12 C 0.11 -0.42 4.32 45.51 0.20 -0.23 16 13 H 0.08 0.18 7.47 -2.39 -0.02 0.16 16 14 C -0.13 1.08 7.29 31.12 0.23 1.31 16 15 C -0.06 0.59 3.85 -11.01 -0.04 0.55 16 16 H 0.13 -1.84 8.09 -2.39 -0.02 -1.86 16 17 C -0.05 0.30 5.29 -19.87 -0.11 0.19 16 18 C -0.09 0.63 9.71 22.27 0.22 0.85 16 19 C -0.10 0.32 9.83 22.29 0.22 0.54 16 20 C -0.05 -0.10 6.32 22.34 0.14 0.04 16 21 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.33 16 22 C -0.05 -0.10 6.32 22.34 0.14 0.04 16 23 Cl -0.06 -0.29 27.96 -2.72 -0.08 -0.37 16 24 C -0.10 0.20 8.33 22.29 0.19 0.38 16 25 C -0.14 0.76 7.26 31.12 0.23 0.99 16 26 C -0.05 0.29 9.54 22.52 0.21 0.50 16 27 C -0.13 0.67 8.64 22.24 0.19 0.87 16 28 H 0.40 -3.26 8.74 -74.06 -0.65 -3.91 16 29 H 0.10 -0.63 7.96 -2.39 -0.02 -0.65 16 30 H -0.29 0.37 7.11 99.48 0.71 1.07 16 31 H -0.28 0.34 7.04 99.48 0.70 1.04 16 32 H 0.13 0.35 8.06 -2.91 -0.02 0.33 16 33 H 0.41 0.59 9.06 -74.06 -0.67 -0.08 16 34 H 0.42 -4.88 6.73 -92.71 -0.62 -5.51 16 35 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 36 H 0.10 -0.74 7.66 -2.38 -0.02 -0.76 16 37 H 0.17 -2.24 8.05 -2.91 -0.02 -2.27 16 38 H 0.16 -1.02 8.06 -2.91 -0.02 -1.05 16 39 H 0.15 -0.54 6.72 -2.91 -0.02 -0.56 16 40 H 0.09 -0.40 6.38 -2.39 -0.02 -0.42 16 41 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 42 H 0.17 -2.51 6.40 -2.91 -0.02 -2.53 16 43 H 0.16 -1.63 4.83 -2.91 -0.01 -1.64 16 Total: 0.00 -26.07 389.62 -0.83 -26.90 By element: Atomic # 1 Polarization: -19.23 SS G_CDS: -0.79 Total: -20.02 kcal Atomic # 6 Polarization: 6.98 SS G_CDS: 2.83 Total: 9.81 kcal Atomic # 7 Polarization: 2.98 SS G_CDS: -2.31 Total: 0.67 kcal Atomic # 8 Polarization: -11.16 SS G_CDS: -2.45 Total: -13.61 kcal Atomic # 14 Polarization: -5.10 SS G_CDS: 2.05 Total: -3.05 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -0.15 Total: -0.70 kcal Total: -26.07 -0.83 -26.90 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.647 kcal (2) G-P(sol) polarization free energy of solvation -26.069 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.829 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.899 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds