Wall clock time and date at job start Mon Mar 8 2021 04:37:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.37792 * 119.85114 * 2 1 4 4 C 1.39703 * 119.91174 * 179.97438 * 3 2 1 5 5 C 1.47533 * 120.19092 * 179.97438 * 4 3 2 6 6 O 1.21588 * 120.00025 * 179.97438 * 5 4 3 7 7 N 1.34784 * 120.00117 * 359.97438 * 5 4 3 8 8 C 1.46493 * 119.99864 * 179.72963 * 7 5 4 9 9 H 1.09000 * 112.85483 * 334.66378 * 8 7 5 10 10 C 1.53777 * 113.61833 * 105.86275 * 8 7 5 11 11 C 1.54054 * 86.98542 * 89.15903 * 10 8 7 12 12 H 1.09000 * 113.68870 * 270.87285 * 11 10 8 13 13 C 1.50706 * 113.61760 * 139.98265 * 11 10 8 14 14 C 1.38202 * 119.97634 * 142.50622 * 13 11 10 15 15 C 1.38351 * 119.99374 * 179.97438 * 14 13 11 16 16 Cl 1.73606 * 120.01525 * 180.02562 * 15 14 13 17 17 C 1.38435 * 119.96597 * 0.02562 * 15 14 13 18 18 Cl 1.73601 * 120.02123 * 180.02562 * 17 15 14 19 19 C 1.38349 * 119.95955 * 359.97438 * 17 15 14 20 20 C 1.38206 * 120.00087 * 359.75071 * 19 17 15 21 21 C 1.53777 * 87.07820 * 25.43361 * 11 10 8 22 22 C 1.40140 * 119.61883 * 0.24982 * 4 3 2 23 23 O 1.35650 * 120.15097 * 179.72729 * 22 4 3 24 24 C 1.38713 * 119.69215 * 359.51498 * 22 4 3 25 25 C 1.50706 * 119.95057 * 180.24798 * 24 22 4 26 26 O 1.42902 * 109.46630 * 75.23943 * 25 24 22 27 27 Si 1.86299 * 109.46868 * 195.23576 * 25 24 22 28 28 C 1.38054 * 120.08806 * 0.49114 * 24 22 4 29 29 H 1.08998 * 109.46942 * 90.00512 * 1 2 3 30 30 H 1.09003 * 109.46933 * 210.00104 * 1 2 3 31 31 H 1.08995 * 109.47517 * 330.00052 * 1 2 3 32 32 H 1.08006 * 120.03785 * 0.02562 * 3 2 1 33 33 H 0.97000 * 119.99339 * 0.02562 * 7 5 4 34 34 H 1.09001 * 113.61733 * 203.66099 * 10 8 7 35 35 H 1.09003 * 113.61313 * 334.56504 * 10 8 7 36 36 H 1.08001 * 120.00587 * 359.95296 * 14 13 11 37 37 H 1.08001 * 119.99748 * 180.02562 * 19 17 15 38 38 H 1.08001 * 119.98409 * 180.27662 * 20 19 17 39 39 H 1.08998 * 113.61800 * 220.02412 * 21 11 10 40 40 H 1.08999 * 113.61311 * 89.11809 * 21 11 10 41 41 H 0.96695 * 114.00304 * 90.00181 * 23 22 4 42 42 H 1.08998 * 109.47598 * 315.24075 * 25 24 22 43 43 H 0.96700 * 113.99688 * 179.97438 * 26 25 24 44 44 H 1.48501 * 110.00099 * 178.68508 * 27 25 24 45 45 H 1.48497 * 110.00100 * 300.00440 * 27 25 24 46 46 H 1.08000 * 119.79906 * 179.76467 * 28 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1966 0.0005 5 6 4.3304 2.4726 0.0000 6 8 5.5463 2.4698 0.0009 7 7 3.6591 3.6414 -0.0016 8 6 4.3945 4.9083 0.0038 9 1 5.3901 4.8181 0.4384 10 6 4.3773 5.6365 -1.3505 11 6 3.0840 6.3237 -0.8726 12 1 2.1778 5.7690 -1.1159 13 6 2.9984 7.7798 -1.2517 14 6 1.7849 8.3261 -1.6243 15 6 1.7058 9.6629 -1.9719 16 17 0.1816 10.3500 -2.4394 17 6 2.8428 10.4524 -1.9467 18 17 2.7451 12.1301 -2.3819 19 6 4.0567 9.9037 -1.5734 20 6 4.1329 8.5695 -1.2211 21 6 3.5832 6.0891 0.5628 22 6 4.2837 -0.0210 -0.0042 23 8 5.6402 -0.0321 -0.0093 24 6 3.5771 -1.2146 0.0008 25 6 4.3174 -2.5273 0.0013 26 8 4.8546 -2.7705 1.3030 27 14 3.1448 -3.9017 -0.4534 28 6 2.1966 -1.2016 0.0001 29 1 -0.3633 -0.0001 -1.0277 30 1 -0.3633 -0.8900 0.5139 31 1 -0.3634 0.8899 0.5138 32 1 1.6509 2.1294 0.0004 33 1 2.6891 3.6435 -0.0020 34 1 5.2121 6.3239 -1.4873 35 1 4.2313 4.9716 -2.2019 36 1 0.8984 7.7096 -1.6445 37 1 4.9440 10.5191 -1.5532 38 1 5.0799 8.1425 -0.9254 39 1 2.7965 5.7894 1.2552 40 1 4.2012 6.9001 0.9481 41 1 6.0368 -0.0369 0.8725 42 1 5.1291 -2.4870 -0.7250 43 1 5.3450 -3.6006 1.3773 44 1 3.8696 -5.1973 -0.4873 45 1 2.0334 -3.9671 0.5294 46 1 1.6511 -2.1337 0.0002 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:36 Heat of formation + Delta-G solvation = -37.626840 kcal Electronic energy + Delta-G solvation = -32591.750382 eV Core-core repulsion = 27886.739990 eV Total energy + Delta-G solvation = -4705.010392 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.073 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -41.93092 -41.24473 -40.12499 -38.94435 -38.04509 -37.72532 -37.56282 -37.39965 -34.71168 -33.18622 -32.79441 -32.08609 -31.31826 -27.54547 -26.80458 -26.69485 -26.51996 -24.97891 -24.04169 -22.75111 -21.82677 -21.61471 -20.26210 -19.45273 -18.70053 -18.59074 -18.18345 -17.61312 -17.16078 -16.86726 -16.63880 -16.49946 -16.03837 -16.00087 -15.64469 -15.36725 -15.28420 -15.18881 -14.99002 -14.80996 -14.48494 -14.40188 -14.08880 -13.79865 -13.70181 -13.55140 -13.36661 -13.19428 -12.97137 -12.94302 -12.91304 -12.52838 -12.45447 -12.38325 -12.35144 -11.95396 -11.88457 -11.82348 -11.73003 -11.57629 -11.25982 -10.93217 -10.49197 -10.25337 -10.00253 -9.97977 -9.59752 -9.49456 -4.95980 -0.34369 -0.12728 0.06718 0.07128 0.80425 1.20068 1.23951 1.55603 1.70325 1.87333 2.02673 2.35571 2.52848 3.17891 3.28605 3.42427 3.52942 3.55805 3.66381 3.69416 3.71445 3.82733 3.92189 4.00364 4.10077 4.11580 4.16576 4.20282 4.32967 4.38733 4.52433 4.61108 4.64520 4.68929 4.78048 4.81250 4.85407 4.89241 4.91633 4.96683 4.99241 5.02896 5.08683 5.14461 5.20675 5.24663 5.38579 5.42548 5.59229 5.61241 5.67871 6.46635 6.51879 6.68048 7.16927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.094 4.094 3 C -0.060 4.060 4 C -0.179 4.179 5 C 0.560 3.440 6 O -0.562 6.562 7 N -0.696 5.696 8 C 0.114 3.886 9 H 0.086 0.914 10 C -0.143 4.143 11 C -0.065 4.065 12 H 0.119 0.881 13 C -0.050 4.050 14 C -0.097 4.097 15 C -0.044 4.044 16 Cl -0.060 7.060 17 C -0.053 4.053 18 Cl -0.063 7.063 19 C -0.099 4.099 20 C -0.098 4.098 21 C -0.123 4.123 22 C 0.162 3.838 23 O -0.491 6.491 24 C -0.118 4.118 25 C -0.087 4.087 26 O -0.556 6.556 27 Si 0.773 3.227 28 C -0.081 4.081 29 H 0.090 0.910 30 H 0.073 0.927 31 H 0.085 0.915 32 H 0.164 0.836 33 H 0.414 0.586 34 H 0.102 0.898 35 H 0.067 0.933 36 H 0.158 0.842 37 H 0.155 0.845 38 H 0.160 0.840 39 H 0.092 0.908 40 H 0.106 0.894 41 H 0.401 0.599 42 H 0.079 0.921 43 H 0.395 0.605 44 H -0.286 1.286 45 H -0.279 1.279 46 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.895 -2.934 0.400 5.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.094 4.094 3 C -0.078 4.078 4 C -0.183 4.183 5 C 0.348 3.652 6 O -0.441 6.441 7 N -0.348 5.348 8 C 0.009 3.991 9 H 0.104 0.896 10 C -0.181 4.181 11 C -0.083 4.083 12 H 0.137 0.863 13 C -0.050 4.050 14 C -0.116 4.116 15 C -0.071 4.071 16 Cl -0.031 7.031 17 C -0.080 4.080 18 Cl -0.034 7.034 19 C -0.118 4.118 20 C -0.116 4.116 21 C -0.160 4.160 22 C 0.115 3.885 23 O -0.303 6.303 24 C -0.119 4.119 25 C -0.195 4.195 26 O -0.366 6.366 27 Si 0.676 3.324 28 C -0.099 4.099 29 H 0.109 0.891 30 H 0.092 0.908 31 H 0.104 0.896 32 H 0.182 0.818 33 H 0.253 0.747 34 H 0.120 0.880 35 H 0.086 0.914 36 H 0.175 0.825 37 H 0.173 0.827 38 H 0.177 0.823 39 H 0.110 0.890 40 H 0.125 0.875 41 H 0.260 0.740 42 H 0.097 0.903 43 H 0.245 0.755 44 H -0.213 1.213 45 H -0.206 1.206 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -4.876 -2.863 0.085 5.655 hybrid contribution 0.874 0.067 1.091 1.400 sum -4.002 -2.796 1.176 5.022 Atomic orbital electron populations 1.20917 0.87930 1.04332 1.04130 1.20111 0.98168 0.91675 0.99490 1.21437 0.90943 0.99824 0.95592 1.20400 0.95073 0.92529 1.10308 1.18237 0.86856 0.84262 0.75799 1.90809 1.14963 1.87855 1.50474 1.45447 1.10677 1.04140 1.74581 1.21872 0.96822 0.82614 0.97825 0.89578 1.23634 0.98000 0.99165 0.97305 1.21705 0.99631 0.90118 0.96845 0.86311 1.19901 0.92013 0.96304 0.96830 1.21169 0.99820 0.91828 0.98775 1.20983 0.86718 0.94599 1.04840 1.98404 1.29268 1.84967 1.90499 1.21033 0.94962 0.86440 1.05601 1.98402 1.98593 1.15006 1.91428 1.21295 0.95921 0.96405 0.98190 1.21382 0.99953 0.92211 0.98087 1.23399 1.00127 0.96822 0.95684 1.18518 0.83632 0.90823 0.95506 1.84640 1.15283 1.96075 1.34260 1.19739 0.94132 0.93506 1.04529 1.25012 1.04483 1.02108 0.87873 1.86500 1.74088 1.45874 1.30158 0.93927 0.77299 0.73488 0.87659 1.21362 0.92261 0.99769 0.96519 0.89130 0.90842 0.89610 0.81833 0.74750 0.87952 0.91402 0.82487 0.82730 0.82281 0.88991 0.87524 0.74008 0.90291 0.75479 1.21344 1.20629 0.83449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.10 10.00 71.23 0.71 1.81 16 2 C -0.09 0.37 5.87 -19.90 -0.12 0.25 16 3 C -0.06 0.23 9.18 22.52 0.21 0.44 16 4 C -0.18 -0.58 5.89 -20.01 -0.12 -0.69 16 5 C 0.56 2.90 7.76 86.69 0.67 3.57 16 6 O -0.56 -7.76 14.78 16.93 0.25 -7.51 16 7 N -0.70 2.23 5.21 -443.20 -2.31 -0.09 16 8 C 0.11 -0.43 4.29 45.52 0.20 -0.24 16 9 H 0.09 0.09 7.50 -2.39 -0.02 0.07 16 10 C -0.14 0.77 7.27 31.21 0.23 0.99 16 11 C -0.06 0.56 3.87 -10.92 -0.04 0.52 16 12 H 0.12 -1.37 8.09 -2.39 -0.02 -1.39 16 13 C -0.05 0.26 5.29 -19.87 -0.11 0.16 16 14 C -0.10 0.29 9.49 22.29 0.21 0.50 16 15 C -0.04 -0.07 6.32 22.34 0.14 0.07 16 16 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.28 16 17 C -0.05 -0.11 6.32 22.34 0.14 0.04 16 18 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 19 C -0.10 0.20 9.83 22.29 0.22 0.42 16 20 C -0.10 0.50 8.60 22.27 0.19 0.69 16 21 C -0.12 1.08 7.29 31.12 0.23 1.31 16 22 C 0.16 1.05 6.69 22.85 0.15 1.21 16 23 O -0.49 -4.62 10.90 -68.73 -0.75 -5.36 16 24 C -0.12 -0.39 5.30 -19.79 -0.10 -0.49 16 25 C -0.09 -0.11 2.37 71.24 0.17 0.06 16 26 O -0.56 -1.54 12.86 -148.98 -1.92 -3.45 16 27 Si 0.77 -1.99 30.19 68.60 2.07 0.08 16 28 C -0.08 0.07 8.30 22.30 0.19 0.26 16 29 H 0.09 -1.02 8.14 -2.39 -0.02 -1.04 16 30 H 0.07 -0.68 8.08 -2.39 -0.02 -0.70 16 31 H 0.09 -1.02 8.08 -2.39 -0.02 -1.04 16 32 H 0.16 -1.89 6.40 -2.91 -0.02 -1.91 16 33 H 0.41 -4.05 6.73 -92.71 -0.62 -4.67 16 34 H 0.10 -0.66 6.33 -2.39 -0.02 -0.67 16 35 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 36 H 0.16 -1.05 8.05 -2.91 -0.02 -1.07 16 37 H 0.16 -0.76 8.06 -2.91 -0.02 -0.78 16 38 H 0.16 -1.47 6.67 -2.91 -0.02 -1.49 16 39 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 40 H 0.11 -1.00 7.71 -2.39 -0.02 -1.02 16 41 H 0.40 2.12 9.06 -74.06 -0.67 1.45 16 42 H 0.08 0.10 7.82 -2.39 -0.02 0.08 16 43 H 0.39 -1.91 8.74 -74.06 -0.65 -2.55 16 44 H -0.29 -0.55 7.11 99.48 0.71 0.15 16 45 H -0.28 -0.47 6.74 99.48 0.67 0.21 16 46 H 0.15 -0.58 4.87 -2.91 -0.01 -0.60 16 Total: 0.00 -23.74 410.31 -0.49 -24.23 By element: Atomic # 1 Polarization: -17.29 SS G_CDS: -0.85 Total: -18.14 kcal Atomic # 6 Polarization: 7.69 SS G_CDS: 3.17 Total: 10.86 kcal Atomic # 7 Polarization: 2.23 SS G_CDS: -2.31 Total: -0.09 kcal Atomic # 8 Polarization: -13.91 SS G_CDS: -2.41 Total: -16.33 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: 2.07 Total: 0.08 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -0.15 Total: -0.61 kcal Total: -23.74 -0.49 -24.23 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.394 kcal (2) G-P(sol) polarization free energy of solvation -23.742 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.136 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.233 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.627 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds