Wall clock time and date at job start Mon Mar 8 2021 04:37:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46902 * 111.00252 * 2 1 4 4 C 1.39045 * 111.00040 * 123.95389 * 2 1 3 5 5 C 1.39197 * 119.93421 * 119.72035 * 4 2 1 6 6 C 1.50705 * 119.96468 * 0.02562 * 5 4 2 7 7 O 1.42901 * 109.46710 * 74.99779 * 6 5 4 8 8 Si 1.86296 * 109.46977 * 194.99964 * 6 5 4 9 9 C 1.37633 * 120.07201 * 179.76606 * 5 4 2 10 10 C 1.39775 * 119.92695 * 0.49433 * 9 5 4 11 11 C 1.47516 * 120.06824 * 179.74610 * 10 9 5 12 12 O 1.21592 * 120.00169 * 0.02562 * 11 10 9 13 13 N 1.34777 * 120.00034 * 180.02562 * 11 10 9 14 14 C 1.46505 * 120.00282 * 179.97438 * 13 11 10 15 15 H 1.09006 * 112.84244 * 336.19319 * 14 13 11 16 16 C 1.53781 * 113.61464 * 107.49745 * 14 13 11 17 17 C 1.53785 * 87.07954 * 89.11782 * 16 14 13 18 18 H 1.08991 * 113.61455 * 270.88066 * 17 16 14 19 19 C 1.50695 * 113.68798 * 139.98872 * 17 16 14 20 20 C 1.38208 * 119.98398 * 322.19304 * 19 17 16 21 21 C 1.38349 * 119.99852 * 179.72678 * 20 19 17 22 22 Cl 1.73605 * 120.01722 * 180.26966 * 21 20 19 23 23 C 1.38440 * 119.96409 * 0.54556 * 21 20 19 24 24 Cl 1.73597 * 120.02313 * 179.74577 * 23 21 20 25 25 C 1.38345 * 119.96020 * 359.72784 * 23 21 20 26 26 C 1.38206 * 119.99946 * 359.97438 * 25 23 21 27 27 C 1.53777 * 113.61576 * 204.99757 * 14 13 11 28 28 C 1.39822 * 119.86412 * 359.75953 * 10 9 5 29 29 C 1.37591 * 119.92807 * 0.02562 * 28 10 9 30 30 H 1.09002 * 109.47411 * 296.05070 * 1 2 3 31 31 H 1.09007 * 109.47071 * 56.04643 * 1 2 3 32 32 H 1.08996 * 109.47424 * 176.04443 * 1 2 3 33 33 H 1.09000 * 109.46807 * 183.95307 * 3 2 1 34 34 H 1.08997 * 109.46913 * 303.94937 * 3 2 1 35 35 H 1.09005 * 109.47092 * 63.95447 * 3 2 1 36 36 H 1.09000 * 109.46707 * 315.00354 * 6 5 4 37 37 H 0.96700 * 113.99997 * 60.00406 * 7 6 5 38 38 H 1.48489 * 110.00368 * 58.68431 * 8 6 5 39 39 H 1.48507 * 109.99808 * 180.02562 * 8 6 5 40 40 H 1.07994 * 120.03800 * 180.23359 * 9 5 4 41 41 H 0.96998 * 120.00047 * 359.97438 * 13 11 10 42 42 H 1.09000 * 113.61093 * 203.66840 * 16 14 13 43 43 H 1.08995 * 113.61440 * 334.57121 * 16 14 13 44 44 H 1.08000 * 120.00038 * 359.97438 * 20 19 17 45 45 H 1.08007 * 120.00003 * 180.02562 * 25 23 21 46 46 H 1.08006 * 119.97850 * 179.97438 * 26 25 23 47 47 H 1.09003 * 113.61675 * 25.43395 * 27 14 13 48 48 H 1.08998 * 113.61544 * 156.24909 * 27 14 13 49 49 H 1.07996 * 120.03398 * 179.97438 * 28 10 9 50 50 H 1.08004 * 119.96170 * 179.97438 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9673 -0.7250 1.0768 5 6 2.7745 -1.8365 0.8518 6 6 3.1076 -2.2519 -0.5581 7 8 4.0790 -1.3558 -1.1017 8 14 3.7957 -3.9830 -0.5492 9 6 3.2732 -2.5533 1.9156 10 6 2.9598 -2.1703 3.2228 11 6 3.4881 -2.9398 4.3651 12 8 4.1973 -3.9080 4.1702 13 7 3.1846 -2.5695 5.6250 14 6 3.7088 -3.3340 6.7596 15 1 3.9610 -4.3615 6.4972 16 6 4.8185 -2.6038 7.5343 17 6 3.7033 -1.9881 8.3959 18 1 3.3119 -1.0514 7.9992 19 6 4.0460 -1.9053 9.8610 20 6 4.7592 -2.9252 10.4622 21 6 5.0788 -2.8469 11.8060 22 17 5.9806 -4.1244 12.5601 23 6 4.6743 -1.7519 12.5503 24 17 5.0689 -1.6552 14.2381 25 6 3.9557 -0.7346 11.9482 26 6 3.6425 -0.8115 10.6043 27 6 2.8517 -3.2154 8.0309 28 6 2.1444 -1.0566 3.4454 29 6 1.6526 -0.3415 2.3778 30 1 -0.3634 0.4513 0.9233 31 1 -0.3633 0.5740 -0.8525 32 1 -0.3634 -1.0252 -0.0709 33 1 3.0828 1.3431 -0.0708 34 1 1.5899 1.9163 -0.8525 35 1 1.7044 1.8724 0.9233 36 1 2.2048 -2.2228 -1.1682 37 1 4.9100 -1.3300 -0.6080 38 1 2.8073 -4.9195 0.0431 39 1 4.1288 -4.4043 -1.9338 40 1 3.9025 -3.4133 1.7404 41 1 2.6192 -1.7969 5.7806 42 1 5.4780 -3.2730 8.0869 43 1 5.3611 -1.8729 6.9349 44 1 5.0703 -3.7814 9.8822 45 1 3.6401 0.1201 12.5282 46 1 3.0811 -0.0173 10.1346 47 1 1.8065 -2.9783 7.8323 48 1 2.9724 -4.0525 8.7185 49 1 1.9002 -0.7584 4.4543 50 1 1.0223 0.5187 2.5491 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:41 Heat of formation + Delta-G solvation = 23.855772 kcal Electronic energy + Delta-G solvation = -34506.707334 eV Core-core repulsion = 29746.544072 eV Total energy + Delta-G solvation = -4760.163263 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.100 amu Computer time = 1.75 seconds Orbital eigenvalues (eV) -41.88987 -41.28313 -40.33694 -39.06613 -37.80391 -37.56180 -37.45005 -37.15770 -34.70873 -32.76726 -31.93823 -31.79416 -31.01553 -28.53009 -26.89638 -26.81465 -26.68183 -25.65943 -24.08851 -23.38613 -22.88145 -22.59901 -21.32116 -20.26959 -19.09804 -18.52478 -17.88572 -17.62458 -17.23138 -17.05177 -16.70977 -16.49688 -16.27277 -16.10610 -15.95661 -15.57127 -15.55174 -15.44219 -15.18066 -15.01019 -14.85796 -14.69563 -14.48583 -14.19484 -13.97214 -13.78697 -13.57853 -13.50184 -13.40650 -13.08232 -12.97454 -12.93664 -12.89002 -12.64427 -12.53043 -12.39691 -12.26748 -12.24672 -12.04758 -12.02524 -11.81092 -11.55639 -11.23406 -11.08878 -10.38959 -10.18411 -10.07881 -9.97122 -9.74712 -9.58854 -9.48738 -5.02969 -0.35958 -0.10770 0.06872 0.18138 0.81033 1.21126 1.27817 1.56404 1.69118 1.89933 2.02378 2.37160 2.66018 2.81367 3.43192 3.52326 3.57115 3.61721 3.64817 3.69893 3.72407 3.84157 3.94173 4.05476 4.08092 4.12934 4.17226 4.26076 4.28019 4.28825 4.37493 4.46241 4.51391 4.60437 4.62345 4.67810 4.73645 4.78259 4.80552 4.88190 4.89139 4.94830 4.99154 5.02185 5.04657 5.05730 5.07361 5.14347 5.18732 5.28554 5.40415 5.56305 5.59993 5.64854 5.86716 6.31081 6.47634 6.82634 7.15674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.525 5.525 3 C 0.034 3.966 4 C 0.137 3.863 5 C -0.118 4.118 6 C -0.037 4.037 7 O -0.542 6.542 8 Si 0.735 3.265 9 C -0.058 4.058 10 C -0.148 4.148 11 C 0.561 3.439 12 O -0.573 6.573 13 N -0.693 5.693 14 C 0.114 3.886 15 H 0.087 0.913 16 C -0.144 4.144 17 C -0.063 4.063 18 H 0.128 0.872 19 C -0.051 4.051 20 C -0.102 4.102 21 C -0.045 4.045 22 Cl -0.063 7.063 23 C -0.054 4.054 24 Cl -0.064 7.064 25 C -0.100 4.100 26 C -0.092 4.092 27 C -0.127 4.127 28 C -0.054 4.054 29 C -0.157 4.157 30 H 0.045 0.955 31 H 0.082 0.918 32 H 0.063 0.937 33 H 0.067 0.933 34 H 0.078 0.922 35 H 0.042 0.958 36 H 0.107 0.893 37 H 0.389 0.611 38 H -0.295 1.295 39 H -0.291 1.291 40 H 0.140 0.860 41 H 0.416 0.584 42 H 0.094 0.906 43 H 0.074 0.926 44 H 0.150 0.850 45 H 0.157 0.843 46 H 0.169 0.831 47 H 0.094 0.906 48 H 0.098 0.902 49 H 0.163 0.837 50 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.247 7.216 1.194 8.458 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.246 5.246 3 C -0.111 4.111 4 C 0.042 3.958 5 C -0.119 4.119 6 C -0.148 4.148 7 O -0.349 6.349 8 Si 0.642 3.358 9 C -0.077 4.077 10 C -0.151 4.151 11 C 0.350 3.650 12 O -0.453 6.453 13 N -0.345 5.345 14 C 0.008 3.992 15 H 0.105 0.895 16 C -0.183 4.183 17 C -0.081 4.081 18 H 0.146 0.854 19 C -0.052 4.052 20 C -0.120 4.120 21 C -0.072 4.072 22 Cl -0.034 7.034 23 C -0.081 4.081 24 Cl -0.035 7.035 25 C -0.119 4.119 26 C -0.110 4.110 27 C -0.164 4.164 28 C -0.074 4.074 29 C -0.177 4.177 30 H 0.064 0.936 31 H 0.100 0.900 32 H 0.081 0.919 33 H 0.086 0.914 34 H 0.097 0.903 35 H 0.061 0.939 36 H 0.124 0.876 37 H 0.238 0.762 38 H -0.222 1.222 39 H -0.218 1.218 40 H 0.157 0.843 41 H 0.255 0.745 42 H 0.112 0.888 43 H 0.093 0.907 44 H 0.168 0.832 45 H 0.174 0.826 46 H 0.186 0.814 47 H 0.112 0.888 48 H 0.117 0.883 49 H 0.180 0.820 50 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -4.052 5.497 0.138 6.830 hybrid contribution -0.638 0.475 1.053 1.320 sum -4.691 5.972 1.191 7.686 Atomic orbital electron populations 1.22529 0.84852 1.02652 1.02162 1.59351 1.09077 1.15373 1.40823 1.22421 1.01006 0.86102 1.01620 1.18987 0.94087 0.93095 0.89643 1.20238 0.99691 0.96221 0.95756 1.24674 0.95188 1.03179 0.91786 1.86519 1.27635 1.65224 1.55475 0.94257 0.87650 0.73892 0.80014 1.21074 0.97150 0.98167 0.91271 1.19843 1.03411 0.98986 0.92841 1.18346 0.79571 0.83405 0.83678 1.90803 1.39316 1.29308 1.85879 1.45424 1.52250 1.32750 1.04073 1.21868 0.95767 0.96153 0.85366 0.89515 1.23573 0.96628 1.00252 0.97800 1.21692 0.97363 1.00225 0.88833 0.85371 1.19928 0.95762 0.93076 0.96423 1.21073 0.98840 1.00795 0.91311 1.20960 1.00841 0.91130 0.94307 1.98405 1.73199 1.49682 1.82142 1.21053 1.03630 0.97074 0.86350 1.98402 1.92866 1.98137 1.14116 1.21349 0.96844 0.97617 0.96082 1.21501 0.98619 0.98514 0.92398 1.23402 0.99763 0.98138 0.95138 1.21449 0.93273 0.91955 1.00675 1.21849 1.01953 1.01667 0.92239 0.93637 0.89963 0.91860 0.91425 0.90344 0.93948 0.87605 0.76226 1.22218 1.21807 0.84328 0.74537 0.88778 0.90689 0.83222 0.82553 0.81372 0.88775 0.88323 0.81959 0.83376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.34 127.69 1.19 1.11 16 2 N -0.53 0.25 4.20 -745.10 -3.13 -2.88 16 3 C 0.03 -0.10 9.38 127.69 1.20 1.09 16 4 C 0.14 -0.09 4.70 38.47 0.18 0.09 16 5 C -0.12 -0.12 5.27 -19.78 -0.10 -0.22 16 6 C -0.04 -0.08 2.33 71.24 0.17 0.09 16 7 O -0.54 -0.99 12.88 -148.98 -1.92 -2.91 16 8 Si 0.73 1.99 29.92 68.60 2.05 4.05 16 9 C -0.06 -0.07 8.19 22.50 0.18 0.11 16 10 C -0.15 0.16 5.88 -20.08 -0.12 0.04 16 11 C 0.56 0.74 7.76 86.69 0.67 1.41 16 12 O -0.57 -5.70 15.94 -4.01 -0.06 -5.77 16 13 N -0.69 4.22 5.21 -443.21 -2.31 1.91 16 14 C 0.11 -0.61 4.32 45.52 0.20 -0.42 16 15 H 0.09 -0.01 7.46 -2.38 -0.02 -0.03 16 16 C -0.14 0.97 7.26 31.12 0.23 1.20 16 17 C -0.06 0.66 3.85 -11.01 -0.04 0.61 16 18 H 0.13 -1.91 8.09 -2.39 -0.02 -1.93 16 19 C -0.05 0.33 5.29 -19.87 -0.11 0.23 16 20 C -0.10 0.28 8.38 22.29 0.19 0.46 16 21 C -0.04 -0.07 6.32 22.34 0.14 0.07 16 22 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 23 C -0.05 -0.07 6.32 22.34 0.14 0.07 16 24 Cl -0.06 -0.24 27.96 -2.72 -0.08 -0.31 16 25 C -0.10 0.36 9.83 22.29 0.22 0.58 16 26 C -0.09 0.68 9.71 22.27 0.22 0.90 16 27 C -0.13 1.22 7.29 31.12 0.23 1.44 16 28 C -0.05 0.37 9.53 22.50 0.21 0.59 16 29 C -0.16 0.81 8.53 22.36 0.19 1.00 16 30 H 0.05 -0.27 7.10 -2.39 -0.02 -0.29 16 31 H 0.08 -0.36 8.12 -2.38 -0.02 -0.38 16 32 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 34 H 0.08 -0.29 8.12 -2.39 -0.02 -0.31 16 35 H 0.04 -0.24 7.32 -2.38 -0.02 -0.26 16 36 H 0.11 0.49 7.77 -2.39 -0.02 0.47 16 37 H 0.39 -2.26 8.70 -74.06 -0.64 -2.90 16 38 H -0.30 -2.65 7.11 99.48 0.71 -1.94 16 39 H -0.29 -2.65 7.11 99.48 0.71 -1.95 16 40 H 0.14 0.23 4.70 -2.91 -0.01 0.22 16 41 H 0.42 -5.37 6.72 -92.71 -0.62 -5.99 16 42 H 0.09 -0.56 6.33 -2.39 -0.02 -0.57 16 43 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 44 H 0.15 -0.70 6.68 -2.91 -0.02 -0.72 16 45 H 0.16 -1.06 8.06 -2.91 -0.02 -1.08 16 46 H 0.17 -2.28 8.05 -2.91 -0.02 -2.31 16 47 H 0.09 -1.11 8.14 -2.39 -0.02 -1.13 16 48 H 0.10 -0.84 7.72 -2.39 -0.02 -0.86 16 49 H 0.16 -2.36 6.39 -2.91 -0.02 -2.38 16 50 H 0.15 -1.32 6.99 -2.91 -0.02 -1.34 16 Total: 0.00 -21.55 434.66 -0.55 -22.10 By element: Atomic # 1 Polarization: -26.12 SS G_CDS: -0.21 Total: -26.33 kcal Atomic # 6 Polarization: 5.28 SS G_CDS: 5.18 Total: 10.47 kcal Atomic # 7 Polarization: 4.47 SS G_CDS: -5.44 Total: -0.97 kcal Atomic # 8 Polarization: -6.69 SS G_CDS: -1.98 Total: -8.67 kcal Atomic # 14 Polarization: 1.99 SS G_CDS: 2.05 Total: 4.05 kcal Atomic # 17 Polarization: -0.49 SS G_CDS: -0.15 Total: -0.64 kcal Total: -21.55 -0.55 -22.10 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.953 kcal (2) G-P(sol) polarization free energy of solvation -21.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.551 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.097 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.856 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.75 seconds