Wall clock time and date at job start Mon Mar 8 2021 04:37:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35989 * 117.00593 * 2 1 4 4 C 1.38560 * 120.06184 * 0.02562 * 3 2 1 5 5 C 1.38278 * 120.01613 * 179.97438 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38209 * 120.15800 * 0.25593 * 5 4 3 10 10 C 1.38378 * 120.12953 * 359.48492 * 9 5 4 11 11 Cl 1.73602 * 120.01189 * 180.25798 * 10 9 5 12 12 C 1.38624 * 119.97880 * 0.51481 * 10 9 5 13 13 O 1.36022 * 120.07722 * 179.72569 * 12 10 9 14 14 C 1.42900 * 116.99852 * 270.02047 * 13 12 10 15 15 C 1.53000 * 109.47401 * 89.99800 * 14 13 12 16 16 C 1.50701 * 109.47247 * 210.00082 * 14 13 12 17 17 O 1.21277 * 119.99908 * 359.97438 * 16 14 13 18 18 N 1.34772 * 119.99941 * 179.97438 * 16 14 13 19 19 C 1.46504 * 119.99898 * 179.97438 * 18 16 14 20 20 H 1.09001 * 112.85000 * 334.67140 * 19 18 16 21 21 C 1.53783 * 113.61344 * 105.86690 * 19 18 16 22 22 C 1.54052 * 86.98476 * 89.16147 * 21 19 18 23 23 H 1.08993 * 113.61732 * 270.88360 * 22 21 19 24 24 C 1.50704 * 113.69502 * 139.98937 * 22 21 19 25 25 C 1.38201 * 119.98019 * 142.46340 * 24 22 21 26 26 C 1.38348 * 119.99611 * 179.97438 * 25 24 22 27 27 Cl 1.73612 * 120.01461 * 179.97438 * 26 25 24 28 28 C 1.38445 * 119.96604 * 0.02562 * 26 25 24 29 29 Cl 1.73600 * 120.02014 * 179.97438 * 28 26 25 30 30 C 1.38340 * 119.95775 * 359.97438 * 28 26 25 31 31 C 1.38209 * 120.00238 * 359.72267 * 30 28 26 32 32 C 1.53781 * 113.61628 * 203.47515 * 19 18 16 33 33 H 1.09004 * 109.47169 * 299.99817 * 1 2 3 34 34 H 1.08997 * 109.47068 * 59.99262 * 1 2 3 35 35 H 1.08995 * 109.47544 * 179.97438 * 1 2 3 36 36 H 1.07991 * 119.99260 * 359.97438 * 4 3 2 37 37 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 38 38 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 39 39 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 40 40 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 41 41 H 1.07994 * 119.93816 * 179.72644 * 9 5 4 42 42 H 1.09000 * 109.47180 * 329.99894 * 14 13 12 43 43 H 1.08997 * 109.47254 * 180.02562 * 15 14 13 44 44 H 1.09002 * 109.46996 * 300.00561 * 15 14 13 45 45 H 1.09000 * 109.46878 * 59.99908 * 15 14 13 46 46 H 0.97004 * 120.00571 * 0.02562 * 18 16 14 47 47 H 1.09002 * 113.61405 * 203.66502 * 21 19 18 48 48 H 1.08995 * 113.61347 * 334.56631 * 21 19 18 49 49 H 1.07993 * 120.00155 * 0.03057 * 25 24 22 50 50 H 1.08004 * 119.99834 * 180.02562 * 30 28 26 51 51 H 1.08005 * 119.98274 * 180.29457 * 31 30 28 52 52 H 1.09003 * 113.61573 * 25.43100 * 32 19 18 53 53 H 1.08995 * 113.61752 * 156.25004 * 32 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 0.0005 5 6 1.9221 3.6061 0.0011 6 6 1.1007 4.8696 0.0011 7 8 0.2767 4.9020 -1.1660 8 14 2.2349 6.3475 0.0011 9 6 3.3021 3.6810 -0.0043 10 6 4.0606 2.5236 0.0006 11 17 5.7939 2.6212 0.0006 12 6 3.4359 1.2861 0.0000 13 8 4.1795 0.1471 -0.0008 14 6 4.5342 -0.3951 -1.2745 15 6 5.8686 0.1999 -1.7285 16 6 4.6634 -1.8926 -1.1647 17 8 4.4711 -2.4414 -0.1004 18 7 4.9925 -2.6219 -2.2492 19 6 5.1186 -4.0775 -2.1423 20 1 5.3605 -4.4084 -1.1323 21 6 3.9480 -4.8456 -2.7784 22 6 4.7513 -4.8191 -4.0927 23 1 4.5571 -3.9389 -4.7055 24 6 4.6753 -6.1050 -4.8750 25 6 4.6151 -6.0711 -6.2553 26 6 4.5459 -7.2513 -6.9737 27 17 4.4695 -7.2093 -8.7077 28 6 4.5364 -8.4659 -6.3093 29 17 4.4489 -9.9477 -7.2094 30 6 4.5967 -8.4979 -4.9275 31 6 4.6722 -7.3181 -4.2116 32 6 6.0157 -4.6994 -3.2256 33 1 -0.3634 0.5138 0.8900 34 1 -0.3633 0.5139 -0.8899 35 1 -0.3634 -1.0276 -0.0005 36 1 0.2147 2.3192 0.0005 37 1 0.4715 4.8939 0.8908 38 1 0.7709 4.8830 -1.9970 39 1 1.4370 7.6000 0.0004 40 1 3.1195 6.3089 1.1931 41 1 3.7896 4.6446 -0.0083 42 1 3.7606 -0.1496 -2.0021 43 1 6.1389 -0.2133 -2.7002 44 1 5.7752 1.2830 -1.8079 45 1 6.6422 -0.0456 -1.0009 46 1 5.1467 -2.1829 -3.1004 47 1 3.8102 -5.8472 -2.3711 48 1 3.0214 -4.2732 -2.8198 49 1 4.6230 -5.1234 -6.7730 50 1 4.5898 -9.4450 -4.4085 51 1 4.7241 -7.3436 -3.1331 52 1 6.7571 -4.0090 -3.6278 53 1 6.4433 -5.6603 -2.9397 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:47 Heat of formation + Delta-G solvation = -63.152351 kcal Electronic energy + Delta-G solvation = -41860.246902 eV Core-core repulsion = 36164.572418 eV Total energy + Delta-G solvation = -5695.674483 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 486.065 amu Computer time = 2.02 seconds Orbital eigenvalues (eV) -42.03048 -41.60887 -40.67383 -39.54551 -39.21269 -38.70913 -37.76350 -37.56240 -37.41316 -36.89662 -34.82087 -33.06244 -32.12333 -31.63823 -31.38385 -31.06881 -28.58719 -26.88296 -26.68517 -26.44309 -25.19443 -24.06780 -23.68838 -22.98828 -22.63029 -21.77025 -20.26997 -19.62462 -18.80216 -18.72305 -18.39604 -18.26488 -17.50755 -17.34308 -17.04413 -16.85078 -16.59527 -16.39750 -16.26361 -16.13701 -15.92001 -15.75274 -15.74799 -15.48659 -15.22012 -15.06144 -14.83892 -14.60376 -14.39866 -14.32785 -14.19536 -13.85749 -13.72270 -13.56592 -13.53966 -13.35567 -13.26688 -12.94474 -12.91544 -12.78465 -12.68874 -12.63645 -12.40884 -12.35168 -12.31540 -12.03970 -11.95270 -11.92830 -11.82096 -11.64733 -11.57255 -11.34192 -11.26127 -10.74416 -10.53499 -10.12128 -9.98430 -9.83342 -9.59479 -9.43302 -5.01517 -0.34493 -0.12590 -0.03470 0.06836 0.80511 0.83891 1.20185 1.25425 1.47636 1.61831 1.66381 1.96028 2.15096 2.22198 2.35806 2.68208 3.33851 3.43508 3.53538 3.55383 3.58638 3.68250 3.70367 3.74474 3.81739 3.84334 3.91373 3.98957 4.00742 4.01134 4.07094 4.10550 4.20212 4.26294 4.29216 4.38798 4.43540 4.59080 4.63583 4.66611 4.69097 4.70261 4.72161 4.78913 4.83199 4.84938 4.89916 4.97422 5.03451 5.08070 5.08866 5.15514 5.17538 5.22561 5.38399 5.59462 5.61122 5.91072 6.31707 6.49769 6.74440 7.17130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.322 6.322 3 C 0.118 3.882 4 C -0.165 4.165 5 C -0.063 4.063 6 C -0.067 4.067 7 O -0.548 6.548 8 Si 0.767 3.233 9 C -0.133 4.133 10 C -0.017 4.017 11 Cl -0.036 7.036 12 C 0.055 3.945 13 O -0.311 6.311 14 C 0.076 3.924 15 C -0.176 4.176 16 C 0.520 3.480 17 O -0.564 6.564 18 N -0.693 5.693 19 C 0.114 3.886 20 H 0.083 0.917 21 C -0.142 4.142 22 C -0.065 4.065 23 H 0.120 0.880 24 C -0.050 4.050 25 C -0.098 4.098 26 C -0.044 4.044 27 Cl -0.061 7.061 28 C -0.053 4.053 29 Cl -0.063 7.063 30 C -0.099 4.099 31 C -0.098 4.098 32 C -0.122 4.122 33 H 0.065 0.935 34 H 0.076 0.924 35 H 0.113 0.887 36 H 0.157 0.843 37 H 0.119 0.881 38 H 0.398 0.602 39 H -0.293 1.293 40 H -0.285 1.285 41 H 0.160 0.840 42 H 0.106 0.894 43 H 0.104 0.896 44 H 0.084 0.916 45 H 0.059 0.941 46 H 0.418 0.582 47 H 0.101 0.899 48 H 0.068 0.932 49 H 0.157 0.843 50 H 0.155 0.845 51 H 0.160 0.840 52 H 0.093 0.907 53 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.006 4.402 -4.693 6.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.235 6.235 3 C 0.071 3.929 4 C -0.183 4.183 5 C -0.064 4.064 6 C -0.177 4.177 7 O -0.356 6.356 8 Si 0.673 3.327 9 C -0.151 4.151 10 C -0.044 4.044 11 Cl -0.007 7.007 12 C 0.009 3.991 13 O -0.227 6.227 14 C 0.017 3.983 15 C -0.234 4.234 16 C 0.306 3.694 17 O -0.442 6.442 18 N -0.347 5.347 19 C 0.009 3.991 20 H 0.102 0.898 21 C -0.180 4.180 22 C -0.083 4.083 23 H 0.138 0.862 24 C -0.050 4.050 25 C -0.116 4.116 26 C -0.071 4.071 27 Cl -0.032 7.032 28 C -0.080 4.080 29 Cl -0.035 7.035 30 C -0.118 4.118 31 C -0.116 4.116 32 C -0.160 4.160 33 H 0.084 0.916 34 H 0.094 0.906 35 H 0.131 0.869 36 H 0.175 0.825 37 H 0.136 0.864 38 H 0.248 0.752 39 H -0.220 1.220 40 H -0.212 1.212 41 H 0.177 0.823 42 H 0.124 0.876 43 H 0.122 0.878 44 H 0.103 0.897 45 H 0.078 0.922 46 H 0.256 0.744 47 H 0.120 0.880 48 H 0.087 0.913 49 H 0.175 0.825 50 H 0.172 0.828 51 H 0.177 0.823 52 H 0.112 0.888 53 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -0.056 4.308 -3.166 5.347 hybrid contribution -0.530 -0.594 -0.221 0.825 sum -0.585 3.715 -3.387 5.061 Atomic orbital electron populations 1.23419 0.76010 1.05632 1.02755 1.86217 1.23581 1.25784 1.87907 1.19377 0.90928 0.85940 0.96663 1.21277 1.01565 0.90196 1.05301 1.20217 0.92832 0.95862 0.97519 1.25131 0.99676 1.00913 0.91992 1.86495 1.36176 1.96754 1.16158 0.93780 0.78247 0.73700 0.87018 1.20921 0.92837 0.97385 1.03967 1.20975 0.86245 0.93151 1.04042 1.98392 1.07809 1.98311 1.96196 1.17810 0.86995 0.85674 1.08587 1.86237 1.69844 1.38203 1.28417 1.22332 1.00174 0.90086 0.85701 1.22593 0.94333 1.03479 1.02948 1.20563 0.75769 0.89090 0.83949 1.90738 1.50016 1.73529 1.29889 1.45419 1.70496 1.06799 1.12024 1.21867 0.97737 0.79313 1.00206 0.89832 1.23628 0.97678 1.01675 0.95065 1.21707 0.97457 0.94739 0.94382 0.86247 1.19901 0.97057 0.95752 0.92291 1.21167 0.99703 0.96895 0.93850 1.20984 1.06430 0.94123 0.85580 1.98405 1.96627 1.98830 1.09313 1.21030 1.07158 0.86518 0.93325 1.98402 1.96608 1.33318 1.75125 1.21291 0.99039 1.01057 0.90420 1.21384 0.97954 0.90530 1.01773 1.23392 0.96000 1.02591 0.93990 0.91622 0.90596 0.86892 0.82550 0.86392 0.75151 1.22032 1.21152 0.82297 0.87597 0.87759 0.89729 0.92164 0.74416 0.88047 0.91273 0.82510 0.82760 0.82298 0.88843 0.87622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.07 16 2 O -0.32 -1.72 10.28 -79.56 -0.82 -2.54 16 3 C 0.12 0.45 6.70 22.56 0.15 0.60 16 4 C -0.16 0.12 8.60 22.36 0.19 0.31 16 5 C -0.06 0.16 5.39 -19.86 -0.11 0.05 16 6 C -0.07 0.29 2.82 71.24 0.20 0.49 16 7 O -0.55 2.56 12.76 -148.98 -1.90 0.66 16 8 Si 0.77 -3.67 29.78 68.60 2.04 -1.63 16 9 C -0.13 0.25 8.45 22.30 0.19 0.44 16 10 C -0.02 -0.03 6.24 22.40 0.14 0.11 16 11 Cl -0.04 -0.05 24.90 -2.72 -0.07 -0.12 16 12 C 0.05 0.29 5.56 22.58 0.13 0.42 16 13 O -0.31 -2.75 8.55 -67.39 -0.58 -3.33 16 14 C 0.08 0.10 3.20 29.85 0.10 0.20 16 15 C -0.18 0.65 8.29 71.98 0.60 1.25 16 16 C 0.52 2.35 7.23 87.66 0.63 2.98 16 17 O -0.56 -8.81 16.12 16.02 0.26 -8.55 16 18 N -0.69 2.94 5.16 -440.04 -2.27 0.67 16 19 C 0.11 -0.48 4.29 45.52 0.20 -0.28 16 20 H 0.08 0.11 7.50 -2.39 -0.02 0.09 16 21 C -0.14 0.85 7.27 31.21 0.23 1.07 16 22 C -0.06 0.59 3.87 -10.92 -0.04 0.55 16 23 H 0.12 -1.44 8.09 -2.39 -0.02 -1.46 16 24 C -0.05 0.28 5.29 -19.87 -0.11 0.17 16 25 C -0.10 0.31 9.49 22.29 0.21 0.52 16 26 C -0.04 -0.06 6.32 22.35 0.14 0.08 16 27 Cl -0.06 -0.19 27.96 -2.72 -0.08 -0.27 16 28 C -0.05 -0.09 6.32 22.34 0.14 0.05 16 29 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 30 C -0.10 0.22 9.83 22.29 0.22 0.44 16 31 C -0.10 0.52 8.60 22.27 0.19 0.72 16 32 C -0.12 1.12 7.28 31.12 0.23 1.35 16 33 H 0.07 -0.28 7.66 -2.38 -0.02 -0.30 16 34 H 0.08 -0.49 7.66 -2.39 -0.02 -0.51 16 35 H 0.11 -0.55 8.14 -2.39 -0.02 -0.57 16 36 H 0.16 -0.56 6.30 -2.92 -0.02 -0.58 16 37 H 0.12 -0.44 7.96 -2.39 -0.02 -0.46 16 38 H 0.40 -5.09 8.70 -74.05 -0.64 -5.73 16 39 H -0.29 -0.74 7.11 99.48 0.71 -0.03 16 40 H -0.28 -0.18 7.11 99.48 0.71 0.53 16 41 H 0.16 -0.91 4.86 -2.91 -0.01 -0.93 16 42 H 0.11 -0.28 7.91 -2.39 -0.02 -0.30 16 43 H 0.10 -1.09 7.57 -2.39 -0.02 -1.11 16 44 H 0.08 -0.32 5.45 -2.39 -0.01 -0.34 16 45 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 46 H 0.42 -4.72 8.12 -92.71 -0.75 -5.47 16 47 H 0.10 -0.69 6.34 -2.39 -0.02 -0.70 16 48 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 49 H 0.16 -1.08 8.05 -2.91 -0.02 -1.10 16 50 H 0.15 -0.78 8.06 -2.91 -0.02 -0.80 16 51 H 0.16 -1.50 6.68 -2.91 -0.02 -1.52 16 52 H 0.09 -1.03 8.14 -2.39 -0.02 -1.05 16 53 H 0.11 -1.01 7.72 -2.39 -0.02 -1.02 16 Total: 0.00 -27.39 475.76 0.92 -26.48 By element: Atomic # 1 Polarization: -23.31 SS G_CDS: -0.34 Total: -23.64 kcal Atomic # 6 Polarization: 7.85 SS G_CDS: 4.74 Total: 12.59 kcal Atomic # 7 Polarization: 2.94 SS G_CDS: -2.27 Total: 0.67 kcal Atomic # 8 Polarization: -10.72 SS G_CDS: -3.04 Total: -13.75 kcal Atomic # 14 Polarization: -3.67 SS G_CDS: 2.04 Total: -1.63 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -0.22 Total: -0.72 kcal Total: -27.39 0.92 -26.48 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.677 kcal (2) G-P(sol) polarization free energy of solvation -27.392 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.916 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.475 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.02 seconds