Wall clock time and date at job start Mon Mar 8 2021 04:37:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86296 * 109.47440 * 2 1 4 4 C 1.50698 * 109.47258 * 239.99600 * 2 1 3 5 5 C 1.32695 * 124.68712 * 300.00587 * 4 2 1 6 6 C 1.44509 * 113.09940 * 180.30234 * 5 4 2 7 7 C 1.47041 * 123.49190 * 179.70815 * 6 5 4 8 8 O 1.21648 * 120.00235 * 179.97438 * 7 6 5 9 9 N 1.34781 * 119.99728 * 0.02562 * 7 6 5 10 10 C 1.46504 * 119.99599 * 179.97438 * 9 7 6 11 11 H 1.08994 * 112.85317 * 336.19949 * 10 9 7 12 12 C 1.53786 * 113.61228 * 107.50674 * 10 9 7 13 13 C 1.53781 * 87.08132 * 89.11424 * 12 10 9 14 14 H 1.09006 * 113.68954 * 270.87258 * 13 12 10 15 15 C 1.50698 * 113.61314 * 139.98247 * 13 12 10 16 16 C 1.38218 * 119.97931 * 322.22941 * 15 13 12 17 17 C 1.38255 * 120.03416 * 179.72696 * 16 15 13 18 18 C 1.38293 * 120.00139 * 0.54639 * 17 16 15 19 19 Cl 1.73606 * 120.02025 * 179.70362 * 18 17 16 20 20 C 1.38487 * 119.96442 * 359.72483 * 18 17 16 21 21 Cl 1.73597 * 120.02452 * 180.02562 * 20 18 17 22 22 C 1.38252 * 119.98247 * 142.50039 * 15 13 12 23 23 C 1.53777 * 87.08275 * 25.43239 * 13 12 10 24 24 C 1.36226 * 113.01407 * 359.50709 * 6 5 4 25 25 Cl 1.73598 * 124.60190 * 180.21941 * 24 6 5 26 26 S 1.70443 * 110.78833 * 0.47600 * 24 6 5 27 27 H 0.96708 * 113.99607 * 60.00071 * 1 2 3 28 28 H 1.09005 * 109.46900 * 119.99883 * 2 1 3 29 29 H 1.48504 * 110.00088 * 59.99478 * 3 2 1 30 30 H 1.48506 * 110.00349 * 181.31750 * 3 2 1 31 31 H 1.08002 * 123.44619 * 0.02956 * 5 4 2 32 32 H 0.97002 * 120.00254 * 359.97438 * 9 7 6 33 33 H 1.09001 * 113.61257 * 203.66700 * 12 10 9 34 34 H 1.08999 * 113.61142 * 334.56615 * 12 10 9 35 35 H 1.07997 * 119.98741 * 0.02562 * 16 15 13 36 36 H 1.08001 * 119.99561 * 180.24838 * 17 16 15 37 37 H 1.07997 * 119.99400 * 359.97438 * 22 15 13 38 38 H 1.08995 * 113.61622 * 220.02122 * 23 13 12 39 39 H 1.08997 * 113.69363 * 89.12575 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6686 -1.9757 -1.5320 6 6 2.2831 -2.4033 -2.7680 7 6 2.1469 -3.7615 -3.3145 8 8 2.6919 -4.0531 -4.3623 9 7 1.4173 -4.6832 -2.6551 10 6 1.2811 -6.0363 -3.1999 11 1 1.4363 -6.0762 -4.2780 12 6 2.0775 -7.0968 -2.4214 13 6 0.8312 -7.2699 -1.5371 14 1 0.8084 -6.6011 -0.6767 15 6 0.5448 -8.7036 -1.1717 16 6 0.7560 -9.7078 -2.0976 17 6 0.4989 -11.0241 -1.7617 18 6 0.0196 -11.3354 -0.5024 19 17 -0.3107 -12.9872 -0.0826 20 6 -0.1973 -10.3286 0.4235 21 17 -0.7984 -10.7177 2.0050 22 6 0.0657 -9.0131 0.0877 23 6 0.0086 -6.7630 -2.7334 24 6 2.9980 -1.4163 -3.3767 25 17 3.8526 -1.5996 -4.8766 26 16 2.9454 0.0209 -2.4619 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5615 2.4679 1.2085 30 1 3.5347 1.7702 -0.0321 31 1 1.0616 -2.6212 -0.9144 32 1 0.9824 -4.4506 -1.8198 33 1 2.3205 -7.9806 -3.0113 34 1 2.9381 -6.6925 -1.8886 35 1 1.1265 -9.4647 -3.0825 36 1 0.6680 -11.8087 -2.4843 37 1 -0.1028 -8.2274 0.8093 38 1 -0.8008 -6.0893 -2.4526 39 1 -0.3148 -7.5545 -3.4094 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:55 Heat of formation + Delta-G solvation = 4.242573 kcal Electronic energy + Delta-G solvation = -28705.185048 eV Core-core repulsion = 24205.562515 eV Total energy + Delta-G solvation = -4499.622533 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.975 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.82784 -40.75048 -39.50508 -38.78439 -37.91883 -37.53284 -37.41643 -37.01751 -34.52702 -32.26835 -31.83253 -31.47015 -27.23327 -26.91655 -26.83235 -25.39722 -24.15387 -22.82257 -22.36000 -20.92093 -20.34971 -19.50302 -18.63396 -18.07533 -17.83335 -17.31809 -16.96173 -16.65902 -16.56169 -16.12496 -15.93715 -15.80058 -15.70093 -15.25664 -15.09174 -14.90255 -14.68015 -14.50463 -14.32354 -14.16080 -13.79935 -13.72775 -13.48439 -13.07055 -13.00807 -12.88372 -12.57997 -12.47770 -12.45512 -12.42140 -12.11369 -11.98841 -11.92610 -11.90218 -11.71004 -11.43022 -10.91637 -10.73331 -10.19696 -10.06823 -9.95849 -9.75066 -9.64941 -5.33406 -0.65321 -0.26067 -0.19515 -0.03459 0.37915 0.63010 0.81567 0.99769 1.04305 1.18362 1.40687 1.73935 2.04205 2.19053 2.25898 3.09261 3.23471 3.34397 3.39125 3.49686 3.54966 3.69686 3.77144 3.80451 3.81845 3.92767 4.06923 4.17745 4.25663 4.29153 4.45884 4.53157 4.53972 4.61463 4.69732 4.73003 4.81473 4.83617 4.84733 4.93845 4.95940 5.25212 5.44910 5.47246 6.27361 6.36344 7.13545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.024 4.024 3 Si 0.649 3.351 4 C -0.236 4.236 5 C -0.071 4.071 6 C -0.161 4.161 7 C 0.580 3.420 8 O -0.515 6.515 9 N -0.708 5.708 10 C 0.122 3.878 11 H 0.110 0.890 12 C -0.144 4.144 13 C -0.076 4.076 14 H 0.102 0.898 15 C -0.054 4.054 16 C -0.101 4.101 17 C -0.094 4.094 18 C -0.036 4.036 19 Cl -0.048 7.048 20 C -0.028 4.028 21 Cl -0.047 7.047 22 C -0.096 4.096 23 C -0.135 4.135 24 C -0.114 4.114 25 Cl 0.028 6.972 26 S 0.239 5.761 27 H 0.383 0.617 28 H 0.128 0.872 29 H -0.228 1.228 30 H -0.233 1.233 31 H 0.157 0.843 32 H 0.401 0.599 33 H 0.098 0.902 34 H 0.077 0.923 35 H 0.140 0.860 36 H 0.144 0.856 37 H 0.142 0.858 38 H 0.080 0.920 39 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.597 4.541 -0.075 4.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.548 3.452 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.365 3.635 8 O -0.391 6.391 9 N -0.360 5.360 10 C 0.017 3.983 11 H 0.128 0.872 12 C -0.182 4.182 13 C -0.094 4.094 14 H 0.120 0.880 15 C -0.054 4.054 16 C -0.119 4.119 17 C -0.113 4.113 18 C -0.064 4.064 19 Cl -0.018 7.018 20 C -0.056 4.056 21 Cl -0.018 7.018 22 C -0.115 4.115 23 C -0.173 4.173 24 C -0.261 4.261 25 Cl 0.057 6.943 26 S 0.504 5.496 27 H 0.231 0.769 28 H 0.145 0.855 29 H -0.151 1.151 30 H -0.157 1.157 31 H 0.174 0.826 32 H 0.236 0.764 33 H 0.116 0.884 34 H 0.096 0.904 35 H 0.158 0.842 36 H 0.162 0.838 37 H 0.159 0.841 38 H 0.099 0.901 39 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -0.004 5.858 -0.009 5.858 hybrid contribution -0.765 -2.270 0.844 2.539 sum -0.769 3.588 0.835 3.764 Atomic orbital electron populations 1.86539 1.16295 1.81631 1.49307 1.24425 0.85397 1.09133 0.94819 0.95062 0.82408 0.77427 0.90343 1.24812 1.07874 0.99333 1.03273 1.20984 0.99285 0.95014 0.94710 1.20195 1.04772 0.95350 0.97611 1.17382 0.78735 0.83395 0.83978 1.90884 1.45990 1.80148 1.22054 1.45482 1.52954 1.10881 1.26658 1.21835 0.96175 0.80646 0.99657 0.87247 1.23593 0.96908 0.99582 0.98127 1.21659 0.97653 0.92063 0.98011 0.87990 1.19738 0.97345 0.95563 0.92769 1.21110 0.99285 0.91363 1.00160 1.21084 0.98269 0.97664 0.94287 1.20850 1.04259 0.86212 0.95074 1.98414 1.93650 1.16342 1.93432 1.20815 1.02941 0.93771 0.88062 1.98415 1.85996 1.94373 1.22982 1.20955 0.99377 0.94040 0.97114 1.23445 0.96644 1.00248 0.96945 1.25543 1.02876 1.00895 0.96771 1.98446 1.73197 1.97054 1.25628 1.83367 1.46639 1.08606 1.11031 0.76930 0.85496 1.15066 1.15741 0.82569 0.76408 0.88412 0.90381 0.84192 0.83819 0.84062 0.90127 0.88064 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.40 12.85 -35.23 -0.45 0.95 16 2 C -0.02 0.07 2.94 36.00 0.11 0.18 16 3 Si 0.65 -1.92 30.91 -169.99 -5.25 -7.18 16 4 C -0.24 0.53 5.68 -36.20 -0.21 0.33 16 5 C -0.07 0.14 9.71 -39.00 -0.38 -0.24 16 6 C -0.16 -0.07 5.98 -104.58 -0.63 -0.70 16 7 C 0.58 0.92 7.79 -12.69 -0.10 0.82 16 8 O -0.51 -2.59 14.51 5.23 0.08 -2.52 16 9 N -0.71 1.13 5.24 -54.20 -0.28 0.85 16 10 C 0.12 -0.24 4.33 -67.11 -0.29 -0.53 16 11 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 12 C -0.14 0.36 7.25 -25.92 -0.19 0.17 16 13 C -0.08 0.25 3.86 -90.96 -0.35 -0.10 16 14 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 15 C -0.05 0.10 5.29 -104.63 -0.55 -0.46 16 16 C -0.10 0.19 8.60 -39.58 -0.34 -0.15 16 17 C -0.09 0.07 9.83 -39.55 -0.39 -0.32 16 18 C -0.04 -0.04 6.32 -39.47 -0.25 -0.29 16 19 Cl -0.05 -0.08 27.96 -51.86 -1.45 -1.53 16 20 C -0.03 -0.03 6.32 -39.47 -0.25 -0.28 16 21 Cl -0.05 -0.08 27.96 -51.86 -1.45 -1.53 16 22 C -0.10 0.07 9.49 -39.55 -0.38 -0.31 16 23 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 24 C -0.11 -0.11 6.87 30.01 0.21 0.09 16 25 Cl 0.03 0.07 27.20 -51.86 -1.41 -1.34 16 26 S 0.24 -0.38 20.17 -107.50 -2.17 -2.54 16 27 H 0.38 -2.37 8.70 45.56 0.40 -1.97 16 28 H 0.13 -0.39 7.96 -51.93 -0.41 -0.80 16 29 H -0.23 0.03 7.11 56.52 0.40 0.43 16 30 H -0.23 0.21 7.11 56.52 0.40 0.61 16 31 H 0.16 -0.63 7.10 -52.49 -0.37 -1.00 16 32 H 0.40 -1.59 7.24 -40.82 -0.30 -1.89 16 33 H 0.10 -0.29 6.32 -51.93 -0.33 -0.62 16 34 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.14 -0.54 6.67 -52.49 -0.35 -0.89 16 36 H 0.14 -0.32 8.06 -52.49 -0.42 -0.75 16 37 H 0.14 -0.31 8.05 -52.49 -0.42 -0.73 16 38 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 39 H 0.10 -0.38 7.72 -51.93 -0.40 -0.78 16 LS Contribution 388.23 15.07 5.85 5.85 Total: 0.00 -7.22 388.23 -14.17 -21.39 By element: Atomic # 1 Polarization: -7.45 SS G_CDS: -3.46 Total: -10.91 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -4.17 Total: -1.49 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -0.28 Total: 0.85 kcal Atomic # 8 Polarization: -1.19 SS G_CDS: -0.38 Total: -1.57 kcal Atomic # 14 Polarization: -1.92 SS G_CDS: -5.25 Total: -7.18 kcal Atomic # 16 Polarization: -0.38 SS G_CDS: -2.17 Total: -2.54 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -4.31 Total: -4.40 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -7.22 -14.17 -21.39 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.636 kcal (2) G-P(sol) polarization free energy of solvation -7.218 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.417 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.393 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.243 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds