Wall clock time and date at job start Mon Mar 8 2021 04:37:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86306 * 109.47236 * 2 1 4 4 C 1.50701 * 109.47556 * 240.00201 * 2 1 3 5 5 C 1.34186 * 125.43223 * 300.31430 * 4 2 1 6 6 C 1.47022 * 105.94989 * 180.14201 * 5 4 2 7 7 C 1.47382 * 127.19057 * 179.82815 * 6 5 4 8 8 O 1.21607 * 119.99913 * 359.71229 * 7 6 5 9 9 N 1.34771 * 119.99775 * 179.70800 * 7 6 5 10 10 C 1.46499 * 119.99903 * 180.02562 * 9 7 6 11 11 H 1.08997 * 112.90637 * 336.24925 * 10 9 7 12 12 C 1.53779 * 113.61746 * 107.50534 * 10 9 7 13 13 C 1.53779 * 87.08402 * 89.11614 * 12 10 9 14 14 H 1.09002 * 113.61557 * 270.88569 * 13 12 10 15 15 C 1.50699 * 113.61429 * 139.98140 * 13 12 10 16 16 C 1.38226 * 119.97842 * 142.50283 * 15 13 12 17 17 C 1.38250 * 120.03720 * 179.97438 * 16 15 13 18 18 C 1.38299 * 120.00052 * 0.02562 * 17 16 15 19 19 Cl 1.73600 * 120.02037 * 179.97438 * 18 17 16 20 20 C 1.38490 * 119.96463 * 0.02562 * 18 17 16 21 21 Cl 1.73599 * 120.02485 * 179.97438 * 20 18 17 22 22 C 1.38249 * 119.98245 * 322.22843 * 15 13 12 23 23 C 1.53784 * 87.08045 * 25.43458 * 13 12 10 24 24 C 1.36416 * 105.61650 * 359.57187 * 6 5 4 25 25 O 1.33650 * 108.39756 * 0.25963 * 24 6 5 26 26 H 0.96700 * 113.99996 * 60.00009 * 1 2 3 27 27 H 1.09006 * 109.47466 * 119.99982 * 2 1 3 28 28 H 1.48502 * 109.99842 * 298.68248 * 3 2 1 29 29 H 1.48501 * 109.99659 * 59.99852 * 3 2 1 30 30 H 1.07995 * 127.02266 * 359.97438 * 5 4 2 31 31 H 0.97001 * 120.00748 * 0.02562 * 9 7 6 32 32 H 1.09006 * 113.61280 * 203.66438 * 12 10 9 33 33 H 1.09007 * 113.61383 * 334.56407 * 12 10 9 34 34 H 1.07995 * 119.98262 * 0.02562 * 16 15 13 35 35 H 1.07998 * 120.00037 * 179.97438 * 17 16 15 36 36 H 1.08001 * 119.99722 * 0.02562 * 22 15 13 37 37 H 1.09004 * 113.61451 * 220.02152 * 23 13 12 38 38 H 1.08994 * 113.61477 * 89.11454 * 23 13 12 39 39 H 1.08003 * 125.79985 * 180.26254 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6705 -1.9864 -1.5531 6 6 2.3688 -2.2330 -2.8232 7 6 2.3980 -3.4883 -3.5947 8 8 1.8023 -4.4668 -3.1866 9 7 3.0848 -3.5519 -4.7525 10 6 3.1134 -4.7995 -5.5198 11 1 2.9213 -5.6795 -4.9060 12 6 2.2731 -4.7508 -6.8067 13 6 3.5321 -4.2239 -7.5154 14 1 3.6253 -3.1382 -7.4901 15 6 3.7337 -4.7981 -8.8940 16 6 4.2304 -4.0011 -9.9083 17 6 4.4164 -4.5267 -11.1734 18 6 4.1049 -5.8505 -11.4248 19 17 4.3376 -6.5109 -13.0133 20 6 3.6063 -6.6488 -10.4089 21 17 3.2142 -8.3105 -10.7230 22 6 3.4272 -6.1231 -9.1422 23 6 4.3487 -4.9379 -6.4252 24 6 2.9793 -1.0552 -3.1412 25 8 2.7059 -0.1659 -2.1818 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5138 0.8900 28 1 1.5879 2.4586 -1.2242 29 1 1.5615 2.4679 1.2085 30 1 1.0723 -2.6896 -0.9927 31 1 3.5603 -2.7715 -5.0780 32 1 1.9534 -5.7323 -7.1569 33 1 1.4583 -4.0276 -6.7691 34 1 4.4741 -2.9674 -9.7122 35 1 4.8041 -3.9034 -11.9655 36 1 3.0430 -6.7463 -8.3482 37 1 5.2097 -4.3657 -6.0795 38 1 4.5964 -5.9704 -6.6711 39 1 3.5811 -0.8725 -4.0192 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:37:58 Heat of formation + Delta-G solvation = -4.696171 kcal Electronic energy + Delta-G solvation = -26673.461523 eV Core-core repulsion = 22409.180491 eV Total energy + Delta-G solvation = -4264.281032 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.041 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.70187 -41.62544 -40.40466 -39.00532 -38.16070 -37.57208 -37.44482 -34.79929 -33.78062 -32.06391 -31.93406 -31.31134 -26.97798 -26.70705 -26.30552 -24.89179 -23.95859 -22.69748 -22.30742 -21.11230 -20.27870 -19.33835 -18.56564 -17.82000 -17.54735 -17.48924 -17.10561 -16.82571 -16.60745 -16.15170 -16.08502 -15.73349 -15.48488 -15.25134 -15.15152 -14.84470 -14.45634 -14.20721 -13.97643 -13.76062 -13.68325 -13.47579 -13.43780 -12.95088 -12.94292 -12.90285 -12.42251 -12.28137 -12.13659 -12.04313 -11.82611 -11.57667 -11.28370 -11.23648 -10.97620 -10.76494 -10.16945 -9.97712 -9.76245 -9.59748 -4.90289 -0.11531 0.06055 0.28325 0.80211 0.81969 1.20085 1.20382 1.54879 1.76385 1.96994 2.01919 2.24183 2.36680 3.21574 3.41580 3.49440 3.56858 3.57508 3.63761 3.68701 3.91626 3.99608 4.06948 4.12213 4.26003 4.27970 4.34301 4.43982 4.53100 4.62345 4.73461 4.77870 4.84655 4.88612 4.92488 4.98844 5.02655 5.05474 5.14102 5.16028 5.39246 5.57209 5.63209 5.84664 6.35370 6.48740 7.16597 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.047 4.047 3 Si 0.794 3.206 4 C -0.050 4.050 5 C -0.153 4.153 6 C -0.270 4.270 7 C 0.589 3.411 8 O -0.587 6.587 9 N -0.690 5.690 10 C 0.114 3.886 11 H 0.081 0.919 12 C -0.147 4.147 13 C -0.061 4.061 14 H 0.133 0.867 15 C -0.052 4.052 16 C -0.091 4.091 17 C -0.100 4.100 18 C -0.053 4.053 19 Cl -0.064 7.064 20 C -0.046 4.046 21 Cl -0.064 7.064 22 C -0.103 4.103 23 C -0.123 4.123 24 C 0.070 3.930 25 O -0.164 6.164 26 H 0.391 0.609 27 H 0.147 0.853 28 H -0.285 1.285 29 H -0.290 1.290 30 H 0.141 0.859 31 H 0.419 0.581 32 H 0.091 0.909 33 H 0.071 0.929 34 H 0.171 0.829 35 H 0.158 0.842 36 H 0.148 0.852 37 H 0.099 0.901 38 H 0.097 0.903 39 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.373 8.037 -0.921 10.298 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.155 4.155 3 Si 0.697 3.303 4 C -0.098 4.098 5 C -0.173 4.173 6 C -0.275 4.275 7 C 0.378 3.622 8 O -0.468 6.468 9 N -0.342 5.342 10 C 0.008 3.992 11 H 0.099 0.901 12 C -0.186 4.186 13 C -0.079 4.079 14 H 0.151 0.849 15 C -0.053 4.053 16 C -0.109 4.109 17 C -0.119 4.119 18 C -0.081 4.081 19 Cl -0.035 7.035 20 C -0.073 4.073 21 Cl -0.035 7.035 22 C -0.121 4.121 23 C -0.161 4.161 24 C -0.001 4.001 25 O -0.059 6.059 26 H 0.241 0.759 27 H 0.165 0.835 28 H -0.212 1.212 29 H -0.217 1.217 30 H 0.159 0.841 31 H 0.257 0.743 32 H 0.110 0.890 33 H 0.090 0.910 34 H 0.189 0.811 35 H 0.175 0.825 36 H 0.166 0.834 37 H 0.118 0.882 38 H 0.116 0.884 39 H 0.282 0.718 Dipole moment (debyes) X Y Z Total from point charges 5.905 7.934 -0.244 9.893 hybrid contribution -1.417 -1.058 -1.010 2.036 sum 4.488 6.876 -1.254 8.306 Atomic orbital electron populations 1.86653 1.17562 1.80595 1.50042 1.24713 0.83438 1.13357 0.93987 0.93460 0.89753 0.70157 0.76959 1.22659 0.99595 0.93508 0.94070 1.22556 1.02176 0.96162 0.96431 1.21446 1.10007 0.95900 1.00100 1.17516 0.77823 0.86387 0.80459 1.90799 1.46418 1.38865 1.70738 1.45271 1.52260 1.15039 1.21592 1.21850 0.98261 0.87314 0.91780 0.90092 1.23592 0.97159 1.02681 0.95136 1.21697 0.96293 1.01553 0.88334 0.84950 1.19931 0.96676 0.92146 0.96501 1.21513 0.96925 1.01773 0.90652 1.21363 0.99179 0.91947 0.99373 1.21059 1.05198 0.95177 0.86657 1.98402 1.95447 1.86104 1.23566 1.20961 1.04453 0.86678 0.95207 1.98405 1.92491 1.16651 1.95965 1.21072 1.00363 0.96441 0.94269 1.23392 0.96578 1.02742 0.93404 1.25368 0.97044 0.85053 0.92604 1.83718 1.54261 1.40101 1.27824 0.75940 0.83550 1.21157 1.21706 0.84091 0.74309 0.89013 0.90993 0.81135 0.82461 0.83426 0.88242 0.88435 0.71767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.60 12.86 -148.98 -1.92 -2.52 16 2 C -0.05 0.11 2.98 71.24 0.21 0.33 16 3 Si 0.79 -3.54 32.09 68.60 2.20 -1.33 16 4 C -0.05 0.04 6.20 24.76 0.15 0.19 16 5 C -0.15 -0.59 10.87 23.65 0.26 -0.34 16 6 C -0.27 -0.07 6.31 -18.99 -0.12 -0.19 16 7 C 0.59 2.15 7.81 86.65 0.68 2.82 16 8 O -0.59 -8.64 16.58 -4.05 -0.07 -8.70 16 9 N -0.69 3.95 5.25 -443.35 -2.33 1.62 16 10 C 0.11 -0.50 4.32 45.52 0.20 -0.30 16 11 H 0.08 0.15 7.46 -2.39 -0.02 0.13 16 12 C -0.15 0.84 7.25 31.12 0.23 1.06 16 13 C -0.06 0.63 3.86 -11.01 -0.04 0.59 16 14 H 0.13 -2.07 8.10 -2.39 -0.02 -2.09 16 15 C -0.05 0.34 5.29 -19.86 -0.11 0.23 16 16 C -0.09 0.69 9.71 22.27 0.22 0.91 16 17 C -0.10 0.37 9.83 22.29 0.22 0.59 16 18 C -0.05 -0.08 6.32 22.34 0.14 0.06 16 19 Cl -0.06 -0.24 27.96 -2.72 -0.08 -0.32 16 20 C -0.05 -0.09 6.32 22.35 0.14 0.05 16 21 Cl -0.06 -0.29 27.96 -2.72 -0.08 -0.36 16 22 C -0.10 0.23 8.38 22.29 0.19 0.42 16 23 C -0.12 1.19 7.29 31.12 0.23 1.42 16 24 C 0.07 -0.58 11.61 67.39 0.78 0.20 16 25 O -0.16 0.75 8.89 4.52 0.04 0.79 16 26 H 0.39 -1.84 8.70 -74.06 -0.64 -2.49 16 27 H 0.15 -0.70 7.96 -2.38 -0.02 -0.72 16 28 H -0.29 -0.10 7.11 99.48 0.71 0.61 16 29 H -0.29 -0.66 7.11 99.48 0.71 0.04 16 30 H 0.14 1.03 8.06 -2.91 -0.02 1.00 16 31 H 0.42 -6.07 7.67 -92.71 -0.71 -6.78 16 32 H 0.09 -0.41 6.32 -2.38 -0.02 -0.43 16 33 H 0.07 -0.28 8.14 -2.38 -0.02 -0.30 16 34 H 0.17 -2.42 8.05 -2.91 -0.02 -2.44 16 35 H 0.16 -1.10 8.06 -2.91 -0.02 -1.12 16 36 H 0.15 -0.58 6.67 -2.91 -0.02 -0.59 16 37 H 0.10 -1.26 8.14 -2.39 -0.02 -1.28 16 38 H 0.10 -0.81 7.71 -2.39 -0.02 -0.83 16 39 H 0.27 -5.44 7.47 -2.91 -0.02 -5.47 16 Total: 0.00 -26.51 368.70 0.96 -25.54 By element: Atomic # 1 Polarization: -22.58 SS G_CDS: -0.18 Total: -22.76 kcal Atomic # 6 Polarization: 4.68 SS G_CDS: 3.37 Total: 8.05 kcal Atomic # 7 Polarization: 3.95 SS G_CDS: -2.33 Total: 1.62 kcal Atomic # 8 Polarization: -8.49 SS G_CDS: -1.94 Total: -10.43 kcal Atomic # 14 Polarization: -3.54 SS G_CDS: 2.20 Total: -1.33 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -0.15 Total: -0.68 kcal Total: -26.51 0.96 -25.54 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.848 kcal (2) G-P(sol) polarization free energy of solvation -26.508 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.660 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.964 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds