Wall clock time and date at job start Mon Mar 8 2021 04:38:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.37870 * 126.45466 * 2 1 4 4 C 1.46684 * 126.23813 * 359.95467 * 3 2 1 5 5 O 1.21689 * 119.99555 * 0.20355 * 4 3 2 6 6 N 1.34767 * 120.00109 * 180.20001 * 4 3 2 7 7 C 1.46504 * 120.00038 * 179.97438 * 6 4 3 8 8 H 1.09002 * 112.85006 * 334.67495 * 7 6 4 9 9 C 1.53781 * 113.61109 * 105.86433 * 7 6 4 10 10 C 1.54052 * 86.98504 * 89.16707 * 9 7 6 11 11 H 1.09005 * 113.69053 * 270.87522 * 10 9 7 12 12 C 1.50696 * 113.62293 * 139.97760 * 10 9 7 13 13 C 1.38200 * 119.98096 * 322.22918 * 12 10 9 14 14 C 1.38352 * 120.00154 * 179.76833 * 13 12 10 15 15 Cl 1.73596 * 120.01880 * 180.25452 * 14 13 12 16 16 C 1.38439 * 119.95941 * 0.48469 * 14 13 12 17 17 Cl 1.73598 * 120.01975 * 179.74814 * 16 14 13 18 18 C 1.38349 * 119.96382 * 359.77088 * 16 14 13 19 19 C 1.38211 * 119.99710 * 359.97438 * 18 16 14 20 20 C 1.53774 * 113.61709 * 203.47272 * 7 6 4 21 21 N 1.37652 * 107.53360 * 180.11150 * 3 2 1 22 22 C 1.35537 * 108.64067 * 359.60376 * 21 3 2 23 23 C 1.50696 * 125.56448 * 180.24547 * 22 21 3 24 24 O 1.42899 * 109.47253 * 300.00339 * 23 22 21 25 25 Si 1.86304 * 109.47366 * 180.02562 * 23 22 21 26 26 C 1.35453 * 108.87115 * 0.24461 * 22 21 3 27 27 H 1.09000 * 109.47186 * 270.30631 * 1 2 3 28 28 H 1.09008 * 109.47251 * 30.30402 * 1 2 3 29 29 H 1.09001 * 109.47116 * 150.30122 * 1 2 3 30 30 H 0.97004 * 120.00206 * 0.02562 * 6 4 3 31 31 H 1.09006 * 113.61375 * 203.66344 * 9 7 6 32 32 H 1.08997 * 113.61748 * 334.57442 * 9 7 6 33 33 H 1.08003 * 119.99770 * 0.02562 * 13 12 10 34 34 H 1.08002 * 120.00284 * 179.97438 * 18 16 14 35 35 H 1.08003 * 119.97888 * 180.02562 * 19 18 16 36 36 H 1.09003 * 113.61929 * 25.43740 * 20 7 6 37 37 H 1.09007 * 113.61768 * 156.33750 * 20 7 6 38 38 H 0.97001 * 125.68311 * 179.87760 * 21 3 2 39 39 H 1.09009 * 109.47096 * 60.00272 * 23 22 21 40 40 H 0.96701 * 114.00198 * 179.97438 * 24 23 22 41 41 H 1.48500 * 109.99930 * 298.68107 * 25 23 22 42 42 H 1.48498 * 109.99642 * 60.00074 * 25 23 22 43 43 H 1.08003 * 126.06703 * 179.97438 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5094 -0.0009 5 8 0.7026 2.7766 0.0019 6 7 2.8036 3.4999 -0.0049 7 6 2.3677 4.8986 -0.0064 8 1 1.3740 5.0318 -0.4340 9 6 2.5555 5.6037 1.3473 10 6 3.9657 5.9872 0.8600 11 1 4.7279 5.2450 1.0974 12 6 4.3749 7.3876 1.2372 13 6 3.4442 8.4090 1.2136 14 6 3.8183 9.6939 1.5645 15 17 2.6481 10.9760 1.5415 16 6 5.1275 9.9576 1.9293 17 17 5.6001 11.5706 2.3635 18 6 6.0591 8.9349 1.9472 19 6 5.6824 7.6509 1.6015 20 6 3.4170 5.8702 -0.5718 21 7 3.6283 0.6626 -0.0026 22 6 3.6217 -0.6928 0.0048 23 6 4.8433 -1.5752 0.0101 24 8 5.6245 -1.3143 -1.1577 25 14 4.3182 -3.3627 0.0188 26 6 2.3379 -1.1246 0.0065 27 1 -0.3633 0.0055 1.0276 28 1 -0.3634 0.8873 -0.5186 29 1 -0.3633 -0.8927 -0.5092 30 1 3.7500 3.2868 -0.0075 31 1 1.8950 6.4592 1.4893 32 1 2.5562 4.9224 2.1981 33 1 2.4239 8.2033 0.9254 34 1 7.0807 9.1399 2.2314 35 1 6.4098 6.8527 1.6160 36 1 4.1128 5.4040 -1.2694 37 1 2.9917 6.7985 -0.9536 38 1 4.4191 1.2244 -0.0048 39 1 5.4383 -1.3666 0.8994 40 1 6.4285 -1.8479 -1.2203 41 1 3.5316 -3.6550 1.2439 42 1 3.5065 -3.6593 -1.1889 43 1 2.0136 -2.1548 0.0115 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:02 Heat of formation + Delta-G solvation = 16.004601 kcal Electronic energy + Delta-G solvation = -28914.193076 eV Core-core repulsion = 24592.990740 eV Total energy + Delta-G solvation = -4321.202336 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.069 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.73638 -41.57542 -40.33370 -39.03056 -37.64811 -37.59612 -37.47261 -34.92161 -33.59457 -32.16794 -31.97227 -31.37932 -28.35015 -27.29734 -26.77653 -25.97583 -24.14164 -23.17026 -22.52812 -21.69587 -20.65939 -20.17234 -19.56645 -18.56583 -18.43392 -17.32769 -17.01758 -16.88277 -16.63274 -16.50445 -15.87793 -15.66642 -15.44321 -15.25913 -15.11495 -14.99790 -14.90046 -14.73945 -14.36876 -13.93567 -13.77710 -13.72488 -13.62982 -13.49655 -13.35938 -13.11949 -12.97107 -12.93843 -12.58899 -12.46415 -12.32117 -12.07741 -12.02445 -11.85984 -11.64345 -11.32255 -11.22957 -10.46862 -10.29125 -10.01278 -9.98926 -9.63801 -9.29387 -4.93904 -0.15319 0.02535 0.18263 0.77479 1.17330 1.19045 1.36132 1.74376 1.84613 2.03299 2.10969 2.13519 2.32539 3.28275 3.34670 3.51945 3.57987 3.60606 3.71734 3.82276 3.85184 3.93065 4.01603 4.07329 4.09266 4.20697 4.23745 4.40157 4.50673 4.54423 4.62439 4.67037 4.72262 4.74532 4.78031 4.82324 4.91920 4.96712 4.99757 5.00581 5.07078 5.17718 5.32572 5.45865 5.52245 5.57911 5.67304 6.22219 6.40437 6.85553 6.99748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.088 4.088 3 C -0.066 4.066 4 C 0.593 3.407 5 O -0.559 6.559 6 N -0.697 5.697 7 C 0.115 3.885 8 H 0.088 0.912 9 C -0.144 4.144 10 C -0.062 4.062 11 H 0.125 0.875 12 C -0.052 4.052 13 C -0.102 4.102 14 C -0.044 4.044 15 Cl -0.062 7.062 16 C -0.053 4.053 17 Cl -0.062 7.062 18 C -0.099 4.099 19 C -0.092 4.092 20 C -0.124 4.124 21 N -0.505 5.505 22 C 0.075 3.925 23 C -0.059 4.059 24 O -0.564 6.564 25 Si 0.807 3.193 26 C -0.234 4.234 27 H 0.070 0.930 28 H 0.067 0.933 29 H 0.071 0.929 30 H 0.410 0.590 31 H 0.097 0.903 32 H 0.070 0.930 33 H 0.150 0.850 34 H 0.158 0.842 35 H 0.168 0.832 36 H 0.093 0.907 37 H 0.102 0.898 38 H 0.433 0.567 39 H 0.110 0.890 40 H 0.410 0.590 41 H -0.290 1.290 42 H -0.302 1.302 43 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.114 -5.733 0.425 11.633 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.096 4.096 3 C -0.179 4.179 4 C 0.382 3.618 5 O -0.437 6.437 6 N -0.349 5.349 7 C 0.010 3.990 8 H 0.106 0.894 9 C -0.183 4.183 10 C -0.080 4.080 11 H 0.143 0.857 12 C -0.053 4.053 13 C -0.120 4.120 14 C -0.072 4.072 15 Cl -0.033 7.033 16 C -0.080 4.080 17 Cl -0.034 7.034 18 C -0.118 4.118 19 C -0.110 4.110 20 C -0.162 4.162 21 N -0.103 5.103 22 C -0.045 4.045 23 C -0.168 4.168 24 O -0.375 6.375 25 Si 0.712 3.288 26 C -0.259 4.259 27 H 0.089 0.911 28 H 0.086 0.914 29 H 0.090 0.910 30 H 0.247 0.753 31 H 0.115 0.885 32 H 0.089 0.911 33 H 0.167 0.833 34 H 0.176 0.824 35 H 0.186 0.814 36 H 0.111 0.889 37 H 0.120 0.880 38 H 0.273 0.727 39 H 0.127 0.873 40 H 0.263 0.737 41 H -0.218 1.218 42 H -0.230 1.230 43 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 8.212 -5.223 0.350 9.739 hybrid contribution 0.046 1.279 0.204 1.296 sum 8.258 -3.944 0.554 9.168 Atomic orbital electron populations 1.20337 0.89058 1.02827 1.02471 1.20123 0.96457 0.91166 1.01864 1.20116 0.84333 0.93180 1.20256 1.17044 0.85661 0.83375 0.75741 1.90825 1.17606 1.83594 1.51679 1.45371 1.09499 1.05122 1.74877 1.21892 0.99651 0.79585 0.97921 0.89387 1.23625 0.96578 1.00757 0.97290 1.21713 0.97421 0.92420 0.96461 0.85656 1.19890 0.93061 0.95144 0.97200 1.21062 1.01693 0.89417 0.99851 1.20950 0.89522 0.91223 1.05495 1.98406 1.57739 1.50194 1.96971 1.21055 0.93522 0.88134 1.05304 1.98403 1.91933 1.21649 1.91366 1.21351 0.99862 0.91447 0.99116 1.21491 0.96237 0.96571 0.96744 1.23396 0.97367 0.99460 0.96003 1.41739 1.06924 1.06329 1.55279 1.20410 0.95681 0.83310 1.05106 1.24583 0.91657 1.08298 0.92300 1.86417 1.41072 1.68296 1.41725 0.94322 0.84214 0.74076 0.76220 1.20603 0.92091 0.98671 1.14489 0.91142 0.91398 0.90962 0.75312 0.88512 0.91074 0.83255 0.82421 0.81445 0.88857 0.87966 0.72661 0.87270 0.73693 1.21764 1.23038 0.84251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.73 9.82 71.24 0.70 -0.03 16 2 C -0.09 -0.75 6.21 -19.57 -0.12 -0.87 16 3 C -0.07 -0.35 7.06 40.35 0.28 -0.07 16 4 C 0.59 3.45 7.79 86.45 0.67 4.12 16 5 O -0.56 -7.59 14.43 -4.31 -0.06 -7.66 16 6 N -0.70 1.96 5.26 -444.01 -2.34 -0.38 16 7 C 0.11 -0.36 4.29 45.51 0.20 -0.16 16 8 H 0.09 0.17 7.50 -2.39 -0.02 0.15 16 9 C -0.14 0.67 7.27 31.21 0.23 0.90 16 10 C -0.06 0.54 3.87 -10.92 -0.04 0.50 16 11 H 0.13 -1.62 8.09 -2.38 -0.02 -1.64 16 12 C -0.05 0.28 5.29 -19.87 -0.11 0.18 16 13 C -0.10 0.18 8.38 22.29 0.19 0.37 16 14 C -0.04 -0.10 6.32 22.34 0.14 0.04 16 15 Cl -0.06 -0.28 27.96 -2.72 -0.08 -0.36 16 16 C -0.05 -0.10 6.32 22.34 0.14 0.04 16 17 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 18 C -0.10 0.30 9.83 22.29 0.22 0.52 16 19 C -0.09 0.60 9.71 22.27 0.22 0.82 16 20 C -0.12 0.99 7.29 31.12 0.23 1.22 16 21 N -0.51 0.36 5.99 -171.93 -1.03 -0.67 16 22 C 0.07 0.13 6.51 41.34 0.27 0.39 16 23 C -0.06 0.34 3.07 71.23 0.22 0.56 16 24 O -0.56 3.65 12.85 -148.98 -1.92 1.73 16 25 Si 0.81 -4.19 30.54 68.60 2.10 -2.10 16 26 C -0.23 -1.51 9.27 22.01 0.20 -1.31 16 27 H 0.07 0.51 8.14 -2.39 -0.02 0.49 16 28 H 0.07 0.75 6.50 -2.38 -0.02 0.74 16 29 H 0.07 0.40 8.14 -2.39 -0.02 0.38 16 30 H 0.41 -3.87 7.83 -92.70 -0.73 -4.60 16 31 H 0.10 -0.41 6.33 -2.38 -0.02 -0.43 16 32 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.15 -0.55 6.67 -2.91 -0.02 -0.57 16 34 H 0.16 -1.01 8.06 -2.91 -0.02 -1.03 16 35 H 0.17 -2.11 8.05 -2.91 -0.02 -2.13 16 36 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 37 H 0.10 -0.75 7.71 -2.38 -0.02 -0.77 16 38 H 0.43 -3.44 8.19 -92.71 -0.76 -4.20 16 39 H 0.11 -1.26 7.96 -2.38 -0.02 -1.28 16 40 H 0.41 -6.96 8.74 -74.06 -0.65 -7.61 16 41 H -0.29 -0.33 7.11 99.48 0.71 0.37 16 42 H -0.30 -1.18 7.11 99.48 0.71 -0.48 16 43 H 0.14 0.80 6.17 -2.91 -0.02 0.78 16 Total: 0.00 -24.76 387.89 -0.75 -25.51 By element: Atomic # 1 Polarization: -21.98 SS G_CDS: -0.99 Total: -22.97 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: 3.63 Total: 7.22 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -3.37 Total: -1.05 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -1.98 Total: -5.92 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: 2.10 Total: -2.10 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -0.15 Total: -0.69 kcal Total: -24.76 -0.75 -25.51 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.513 kcal (2) G-P(sol) polarization free energy of solvation -24.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.757 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.752 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.509 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.005 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds