Wall clock time and date at job start Mon Mar 8 2021 04:38:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.46905 * 2 1 4 4 C 1.50703 * 109.46786 * 119.99552 * 2 1 3 5 5 C 1.34849 * 125.89243 * 245.04185 * 4 2 1 6 6 C 1.40894 * 107.41487 * 179.73319 * 5 4 2 7 7 C 1.34849 * 107.41586 * 0.37829 * 6 5 4 8 8 C 1.50705 * 125.88717 * 179.88238 * 7 6 5 9 9 C 1.50705 * 109.47110 * 274.69505 * 8 7 6 10 10 O 1.21281 * 119.99969 * 359.97438 * 9 8 7 11 11 N 1.34774 * 120.00094 * 180.02562 * 9 8 7 12 12 C 1.46493 * 120.00254 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.84941 * 23.80955 * 12 11 9 14 14 C 1.53778 * 113.61589 * 154.99893 * 12 11 9 15 15 C 1.53788 * 87.08003 * 89.20437 * 14 12 11 16 16 H 1.09000 * 113.61120 * 270.79941 * 15 14 12 17 17 C 1.50698 * 113.61475 * 139.98559 * 15 14 12 18 18 C 1.38218 * 119.98254 * 120.00138 * 17 15 14 19 19 C 1.38255 * 120.03591 * 179.97438 * 18 17 15 20 20 C 1.38297 * 120.00185 * 359.97438 * 19 18 17 21 21 Cl 1.73600 * 120.01833 * 180.02562 * 20 19 18 22 22 C 1.38488 * 119.96128 * 359.97438 * 20 19 18 23 23 Cl 1.73604 * 120.02016 * 179.97438 * 22 20 19 24 24 C 1.38253 * 119.97999 * 299.97525 * 17 15 14 25 25 C 1.53775 * 87.08013 * 25.43466 * 15 14 12 26 26 N 1.36339 * 108.22215 * 359.62142 * 7 6 5 27 27 H 0.96710 * 113.99624 * 60.00189 * 1 2 3 28 28 H 1.08996 * 109.47016 * 239.99715 * 2 1 3 29 29 H 1.48497 * 110.00306 * 298.67327 * 3 2 1 30 30 H 1.48501 * 110.00478 * 59.99974 * 3 2 1 31 31 H 1.07999 * 126.28761 * 359.94732 * 5 4 2 32 32 H 1.08002 * 126.28808 * 180.23819 * 6 5 4 33 33 H 1.08999 * 109.46890 * 154.69328 * 8 7 6 34 34 H 1.09002 * 109.46754 * 34.68974 * 8 7 6 35 35 H 0.97000 * 119.99859 * 0.02562 * 11 9 8 36 36 H 1.08999 * 113.61701 * 334.66214 * 14 12 11 37 37 H 1.08996 * 113.69584 * 203.76252 * 14 12 11 38 38 H 1.07998 * 119.98120 * 0.24788 * 18 17 15 39 39 H 1.08000 * 119.99309 * 179.97438 * 19 18 17 40 40 H 1.08003 * 119.99440 * 0.04162 * 24 17 15 41 41 H 1.09001 * 113.61827 * 89.11412 * 25 15 14 42 42 H 1.08998 * 113.61675 * 220.02153 * 25 15 14 43 43 H 0.97000 * 125.63885 * 180.21449 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6294 -0.1484 2.2382 6 6 2.8917 -1.1589 3.1843 7 6 2.3512 -2.3016 2.7147 8 6 2.3911 -3.6440 3.3986 9 6 3.6784 -4.3466 3.0515 10 8 4.4839 -3.8103 2.3204 11 7 3.9340 -5.5713 3.5527 12 6 5.1851 -6.2545 3.2149 13 1 5.9778 -5.5659 2.9222 14 6 5.6246 -7.2894 4.2639 15 6 4.7916 -8.3191 3.4823 16 1 3.7527 -8.3772 3.8071 17 6 5.4481 -9.6713 3.3763 18 6 4.8183 -10.7874 3.8941 19 6 5.4194 -12.0287 3.7970 20 6 6.6513 -12.1542 3.1810 21 17 7.4061 -13.7127 3.0582 22 6 7.2818 -11.0361 2.6613 23 17 8.8284 -11.1918 1.8883 24 6 6.6798 -9.7950 2.7606 25 6 5.0030 -7.4328 2.2436 26 7 1.7575 -2.0319 1.5174 27 1 -0.3933 0.4417 -0.7652 28 1 1.7923 -0.5139 -0.8899 29 1 1.5880 2.4585 -1.2243 30 1 1.5615 2.4680 1.2085 31 1 2.9290 0.8868 2.3087 32 1 3.4291 -1.0406 4.1136 33 1 1.5466 -4.2470 3.0648 34 1 2.3334 -3.5037 4.4780 35 1 3.2893 -6.0007 4.1365 36 1 5.2416 -7.0869 5.2642 37 1 6.6948 -7.4957 4.2542 38 1 3.8542 -10.6905 4.3709 39 1 4.9269 -12.9003 4.2022 40 1 7.1714 -8.9224 2.3565 41 1 5.9035 -7.6773 1.6802 42 1 4.1184 -7.3458 1.6127 43 1 1.2892 -2.6741 0.9614 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:07 Heat of formation + Delta-G solvation = 19.106584 kcal Electronic energy + Delta-G solvation = -28301.036916 eV Core-core repulsion = 23979.969092 eV Total energy + Delta-G solvation = -4321.067824 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.069 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.31808 -41.56424 -40.38075 -39.00956 -37.83161 -37.57555 -37.44098 -34.53868 -33.11727 -31.95183 -31.93685 -31.60504 -29.43658 -26.69018 -26.33138 -25.06408 -24.05239 -22.82564 -22.08245 -21.33302 -20.99882 -20.18889 -18.70409 -18.60283 -18.16455 -17.99204 -17.15253 -16.79726 -16.60776 -16.31107 -16.00405 -15.61168 -15.42541 -15.20363 -14.95336 -14.93624 -14.70364 -14.52889 -14.23314 -14.07757 -13.84134 -13.61036 -13.54015 -13.41865 -13.27264 -12.95618 -12.91723 -12.88337 -12.46542 -12.36526 -12.26556 -12.04419 -11.94654 -11.81722 -11.55299 -11.23645 -10.95703 -10.61145 -10.05940 -9.96558 -9.79386 -9.60115 -8.95138 -4.86653 -0.12046 0.05346 0.79668 1.09212 1.19693 1.26713 1.61137 1.64885 1.86536 1.95172 2.29422 2.35927 2.51022 3.36722 3.44307 3.57200 3.64396 3.69284 3.71397 3.91794 3.93084 4.06291 4.07555 4.11642 4.23654 4.26915 4.28056 4.30274 4.49033 4.62572 4.64983 4.74129 4.78979 4.81675 4.87556 4.90187 5.00133 5.03057 5.05563 5.19527 5.24744 5.31292 5.41703 5.58986 5.67024 6.00877 6.13106 6.51612 6.57555 6.69719 7.31530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.062 4.062 3 Si 0.782 3.218 4 C 0.017 3.983 5 C -0.205 4.205 6 C -0.200 4.200 7 C 0.035 3.965 8 C -0.066 4.066 9 C 0.514 3.486 10 O -0.574 6.574 11 N -0.699 5.699 12 C 0.116 3.884 13 H 0.080 0.920 14 C -0.126 4.126 15 C -0.062 4.062 16 H 0.129 0.871 17 C -0.052 4.052 18 C -0.092 4.092 19 C -0.100 4.100 20 C -0.053 4.053 21 Cl -0.064 7.064 22 C -0.045 4.045 23 Cl -0.063 7.063 24 C -0.102 4.102 25 C -0.145 4.145 26 N -0.537 5.537 27 H 0.396 0.604 28 H 0.088 0.912 29 H -0.277 1.277 30 H -0.298 1.298 31 H 0.146 0.854 32 H 0.144 0.856 33 H 0.129 0.871 34 H 0.145 0.855 35 H 0.419 0.581 36 H 0.095 0.905 37 H 0.095 0.905 38 H 0.169 0.831 39 H 0.157 0.843 40 H 0.149 0.851 41 H 0.090 0.910 42 H 0.072 0.928 43 H 0.419 0.581 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.491 -1.647 2.771 5.528 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.170 4.170 3 Si 0.685 3.315 4 C -0.096 4.096 5 C -0.230 4.230 6 C -0.225 4.225 7 C -0.080 4.080 8 C -0.106 4.106 9 C 0.301 3.699 10 O -0.452 6.452 11 N -0.352 5.352 12 C 0.010 3.990 13 H 0.098 0.902 14 C -0.164 4.164 15 C -0.080 4.080 16 H 0.147 0.853 17 C -0.053 4.053 18 C -0.110 4.110 19 C -0.119 4.119 20 C -0.081 4.081 21 Cl -0.035 7.035 22 C -0.072 4.072 23 Cl -0.034 7.034 24 C -0.121 4.121 25 C -0.184 4.184 26 N -0.133 5.133 27 H 0.247 0.753 28 H 0.106 0.894 29 H -0.204 1.204 30 H -0.225 1.225 31 H 0.164 0.836 32 H 0.161 0.839 33 H 0.147 0.853 34 H 0.162 0.838 35 H 0.257 0.743 36 H 0.113 0.887 37 H 0.113 0.887 38 H 0.187 0.813 39 H 0.175 0.825 40 H 0.166 0.834 41 H 0.108 0.892 42 H 0.090 0.910 43 H 0.257 0.743 Dipole moment (debyes) X Y Z Total from point charges -3.905 -1.012 2.614 4.807 hybrid contribution -0.954 -0.928 -0.842 1.574 sum -4.859 -1.940 1.773 5.524 Atomic orbital electron populations 1.86540 1.18531 1.80916 1.51214 1.24644 0.83981 1.12149 0.96274 0.93376 0.90703 0.70734 0.76691 1.19870 1.06191 0.84550 0.98990 1.20875 1.06365 1.00263 0.95463 1.20842 1.07026 0.92522 1.02086 1.19956 1.03055 0.96566 0.88374 1.20256 0.96018 0.90529 1.03829 1.20961 0.88471 0.81181 0.79241 1.90762 1.49837 1.66589 1.38030 1.45513 1.21208 1.17339 1.51123 1.21765 0.87164 0.93087 0.96965 0.90203 1.23381 1.01199 0.93024 0.98794 1.21685 1.00678 0.88338 0.97283 0.85288 1.19950 0.93123 0.96343 0.95854 1.21504 1.01161 0.90235 0.98132 1.21356 0.92269 1.00315 0.97929 1.21046 0.96474 0.86205 1.04347 1.98402 1.81833 1.26349 1.96889 1.20955 0.89750 0.94694 1.01836 1.98405 1.27322 1.98197 1.79495 1.21067 0.95884 0.95239 0.99908 1.23564 1.03114 0.95124 0.96602 1.41858 1.44281 1.09092 1.18049 0.75283 0.89374 1.20373 1.22468 0.83615 0.83852 0.85290 0.83765 0.74276 0.88653 0.88687 0.81350 0.82504 0.83377 0.89208 0.90951 0.74337 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.65 12.86 -148.98 -1.92 -3.57 16 2 C -0.06 -0.11 3.07 71.24 0.22 0.11 16 3 Si 0.78 0.21 30.60 68.60 2.10 2.31 16 4 C 0.02 0.10 6.53 41.08 0.27 0.37 16 5 C -0.20 -1.44 9.37 22.14 0.21 -1.23 16 6 C -0.20 -1.23 10.76 22.14 0.24 -0.99 16 7 C 0.03 0.10 5.66 41.08 0.23 0.33 16 8 C -0.07 0.38 6.24 29.10 0.18 0.57 16 9 C 0.51 -0.42 7.82 87.66 0.69 0.27 16 10 O -0.57 -5.90 15.63 -3.03 -0.05 -5.95 16 11 N -0.70 5.19 5.27 -440.05 -2.32 2.87 16 12 C 0.12 -0.59 4.32 45.52 0.20 -0.39 16 13 H 0.08 0.08 7.46 -2.39 -0.02 0.07 16 14 C -0.13 1.15 7.29 31.12 0.23 1.38 16 15 C -0.06 0.61 3.86 -11.01 -0.04 0.57 16 16 H 0.13 -1.86 8.09 -2.39 -0.02 -1.88 16 17 C -0.05 0.31 5.29 -19.87 -0.11 0.20 16 18 C -0.09 0.64 9.71 22.27 0.22 0.85 16 19 C -0.10 0.32 9.83 22.29 0.22 0.54 16 20 C -0.05 -0.09 6.32 22.34 0.14 0.05 16 21 Cl -0.06 -0.25 27.96 -2.72 -0.08 -0.33 16 22 C -0.04 -0.09 6.32 22.34 0.14 0.05 16 23 Cl -0.06 -0.28 27.96 -2.72 -0.08 -0.35 16 24 C -0.10 0.21 8.39 22.29 0.19 0.40 16 25 C -0.15 0.88 7.25 31.12 0.23 1.11 16 26 N -0.54 -1.93 6.07 -171.11 -1.04 -2.97 16 27 H 0.40 -2.15 8.74 -74.05 -0.65 -2.80 16 28 H 0.09 -0.17 7.96 -2.39 -0.02 -0.19 16 29 H -0.28 -0.76 7.11 99.48 0.71 -0.05 16 30 H -0.30 -2.32 7.11 99.48 0.71 -1.61 16 31 H 0.15 0.63 6.24 -2.91 -0.02 0.61 16 32 H 0.14 0.49 8.06 -2.91 -0.02 0.47 16 33 H 0.13 -1.49 8.14 -2.39 -0.02 -1.51 16 34 H 0.14 -1.59 8.14 -2.39 -0.02 -1.60 16 35 H 0.42 -6.13 8.70 -92.71 -0.81 -6.94 16 36 H 0.09 -1.09 8.14 -2.39 -0.02 -1.11 16 37 H 0.09 -0.73 7.72 -2.39 -0.02 -0.74 16 38 H 0.17 -2.20 8.05 -2.91 -0.02 -2.23 16 39 H 0.16 -1.01 8.06 -2.91 -0.02 -1.04 16 40 H 0.15 -0.56 6.66 -2.91 -0.02 -0.58 16 41 H 0.09 -0.43 6.31 -2.39 -0.02 -0.44 16 42 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 43 H 0.42 -0.25 8.96 -92.71 -0.83 -1.08 16 Total: 0.00 -25.76 392.21 -1.08 -26.84 By element: Atomic # 1 Polarization: -21.88 SS G_CDS: -1.15 Total: -23.03 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: 3.44 Total: 4.18 kcal Atomic # 7 Polarization: 3.26 SS G_CDS: -3.36 Total: -0.10 kcal Atomic # 8 Polarization: -7.55 SS G_CDS: -1.96 Total: -9.51 kcal Atomic # 14 Polarization: 0.21 SS G_CDS: 2.10 Total: 2.31 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -0.15 Total: -0.68 kcal Total: -25.76 -1.08 -26.84 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.944 kcal (2) G-P(sol) polarization free energy of solvation -25.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.186 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.080 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds