Wall clock time and date at job start Mon Mar 8 2021 04:38:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86304 * 109.46875 * 2 1 4 4 C 1.50697 * 109.46958 * 240.00383 * 2 1 3 5 5 C 1.38708 * 120.02761 * 284.99588 * 4 2 1 6 6 O 1.35899 * 120.05751 * 0.04850 * 5 4 2 7 7 C 1.42894 * 117.00336 * 179.97438 * 6 5 4 8 8 C 1.50699 * 109.47544 * 179.97438 * 7 6 5 9 9 O 1.21290 * 119.99643 * 359.97438 * 8 7 6 10 10 N 1.34775 * 120.00364 * 179.97438 * 8 7 6 11 11 C 1.46498 * 119.99900 * 180.02562 * 10 8 7 12 12 H 1.09005 * 112.85552 * 23.79781 * 11 10 8 13 13 C 1.53782 * 113.61510 * 155.00148 * 11 10 8 14 14 C 1.53775 * 87.08194 * 89.11412 * 13 11 10 15 15 H 1.09005 * 113.61421 * 270.80051 * 14 13 11 16 16 C 1.50701 * 113.61621 * 139.98417 * 14 13 11 17 17 C 1.38209 * 119.98305 * 119.99325 * 16 14 13 18 18 C 1.38342 * 119.99982 * 180.02562 * 17 16 14 19 19 Cl 1.73600 * 120.01815 * 179.97438 * 18 17 16 20 20 C 1.38448 * 119.96107 * 0.02562 * 18 17 16 21 21 Cl 1.73599 * 120.01857 * 179.97438 * 20 18 17 22 22 C 1.38344 * 119.96430 * 0.02562 * 20 18 17 23 23 C 1.38207 * 119.99461 * 359.72106 * 22 20 18 24 24 C 1.53777 * 87.08365 * 25.43225 * 14 13 11 25 25 C 1.38759 * 119.89010 * 180.02562 * 5 4 2 26 26 C 1.38119 * 119.94381 * 0.02562 * 25 5 4 27 27 C 1.38285 * 120.05710 * 359.97438 * 26 25 5 28 28 C 1.38171 * 120.03194 * 104.99815 * 4 2 1 29 29 H 0.96706 * 113.99943 * 60.00104 * 1 2 3 30 30 H 1.08995 * 109.47335 * 119.99982 * 2 1 3 31 31 H 1.48505 * 109.99877 * 60.00021 * 3 2 1 32 32 H 1.48497 * 109.99934 * 181.31912 * 3 2 1 33 33 H 1.09005 * 109.46979 * 299.99602 * 7 6 5 34 34 H 1.09002 * 109.47431 * 59.99436 * 7 6 5 35 35 H 0.96994 * 119.99979 * 359.97438 * 10 8 7 36 36 H 1.09009 * 113.61154 * 203.66508 * 13 11 10 37 37 H 1.09004 * 113.61089 * 334.47460 * 13 11 10 38 38 H 1.07996 * 119.99910 * 0.02878 * 17 16 14 39 39 H 1.07996 * 120.00142 * 180.02562 * 22 20 18 40 40 H 1.08002 * 119.97744 * 180.29509 * 23 22 20 41 41 H 1.08998 * 113.61639 * 220.01749 * 24 14 13 42 42 H 1.09004 * 113.61415 * 89.11711 * 24 14 13 43 43 H 1.08001 * 120.03003 * 179.97438 * 25 5 4 44 44 H 1.07997 * 119.97310 * 179.97438 * 26 25 5 45 45 H 1.08000 * 119.95126 * 179.74932 * 27 26 25 46 46 H 1.08005 * 119.97031 * 359.97395 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.8697 -2.0939 -1.3070 6 8 1.3555 -2.8106 -0.2732 7 6 1.3230 -4.2314 -0.4215 8 6 0.7253 -4.8521 0.8149 9 8 0.3633 -4.1470 1.7330 10 7 0.5930 -6.1906 0.9005 11 6 0.0114 -6.7938 2.1022 12 1 -0.6321 -6.1068 2.6517 13 6 -0.6273 -8.1703 1.8531 14 6 0.7535 -8.7777 2.1517 15 1 1.3885 -8.8726 1.2709 16 6 0.6927 -10.0428 2.9683 17 6 1.2043 -11.2204 2.4566 18 6 1.1482 -12.3821 3.2057 19 17 1.7899 -13.8616 2.5632 20 6 0.5791 -12.3642 4.4677 21 17 0.5074 -13.8213 5.4087 22 6 0.0666 -11.1849 4.9780 23 6 0.1282 -10.0241 4.2303 24 6 1.0396 -7.5185 2.9869 25 6 2.3335 -2.7451 -2.4412 26 6 2.8557 -2.0145 -3.4906 27 6 2.9160 -0.6352 -3.4119 28 6 2.4537 0.0160 -2.2834 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5138 0.8899 31 1 1.5614 2.4679 1.2085 32 1 3.5345 1.7704 -0.0321 33 1 0.7165 -4.4924 -1.2889 34 1 2.3372 -4.6056 -0.5614 35 1 0.8821 -6.7544 0.1661 36 1 -1.3894 -8.4370 2.5856 37 1 -0.9581 -8.3186 0.8251 38 1 1.6477 -11.2336 1.4720 39 1 -0.3771 -11.1702 5.9625 40 1 -0.2677 -9.1026 4.6308 41 1 2.0559 -7.1412 2.8739 42 1 0.7333 -7.6071 4.0293 43 1 2.2870 -3.8223 -2.5030 44 1 3.2172 -2.5208 -4.3733 45 1 3.3284 -0.0658 -4.2318 46 1 2.5015 1.0934 -2.2245 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:29 Heat of formation + Delta-G solvation = -27.975152 kcal Electronic energy + Delta-G solvation = -31907.008844 eV Core-core repulsion = 27202.416980 eV Total energy + Delta-G solvation = -4704.591863 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.073 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.84135 -41.36818 -40.47563 -39.23599 -38.37748 -37.58751 -37.48277 -37.42914 -34.69520 -32.72404 -32.21628 -31.70163 -31.12938 -29.35263 -26.73158 -26.67070 -26.19035 -24.15901 -23.69137 -22.75704 -22.59595 -21.82995 -20.28549 -19.47561 -18.66939 -18.25258 -17.99328 -17.48095 -17.26788 -17.00909 -16.82380 -16.61002 -16.46285 -16.03851 -15.74491 -15.49828 -15.47821 -15.18023 -15.06049 -14.98727 -14.87955 -14.54765 -14.21111 -13.83249 -13.79125 -13.59163 -13.48016 -13.35894 -13.00152 -12.96808 -12.94564 -12.45224 -12.39975 -12.34165 -12.18191 -12.07085 -11.97713 -11.86051 -11.75329 -11.61237 -11.31256 -11.05148 -10.37367 -10.20123 -10.01331 -9.94291 -9.62546 -9.20154 -5.05074 -0.15586 0.03918 0.26084 0.43584 0.77987 1.17611 1.29245 1.38856 1.46179 1.62460 1.95805 2.32742 2.57832 2.73142 3.39305 3.48202 3.51982 3.56558 3.64509 3.67038 3.76689 3.87833 3.90735 3.97233 3.98648 4.05189 4.07516 4.14803 4.17114 4.33172 4.35510 4.38218 4.54331 4.59462 4.65942 4.66985 4.74517 4.80174 4.86065 4.93740 4.99229 4.99546 5.05308 5.11016 5.30261 5.33771 5.40208 5.55297 5.55664 5.56562 5.78644 6.27641 6.44884 6.82233 7.09711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.072 4.072 3 Si 0.793 3.207 4 C -0.172 4.172 5 C 0.125 3.875 6 O -0.315 6.315 7 C 0.036 3.964 8 C 0.515 3.485 9 O -0.570 6.570 10 N -0.692 5.692 11 C 0.113 3.887 12 H 0.083 0.917 13 C -0.122 4.122 14 C -0.064 4.064 15 H 0.122 0.878 16 C -0.051 4.051 17 C -0.097 4.097 18 C -0.044 4.044 19 Cl -0.060 7.060 20 C -0.053 4.053 21 Cl -0.063 7.063 22 C -0.100 4.100 23 C -0.099 4.099 24 C -0.143 4.143 25 C -0.213 4.213 26 C -0.076 4.076 27 C -0.154 4.154 28 C -0.079 4.079 29 H 0.391 0.609 30 H 0.079 0.921 31 H -0.304 1.304 32 H -0.282 1.282 33 H 0.123 0.877 34 H 0.122 0.878 35 H 0.422 0.578 36 H 0.104 0.896 37 H 0.094 0.906 38 H 0.158 0.842 39 H 0.155 0.845 40 H 0.159 0.841 41 H 0.070 0.930 42 H 0.101 0.899 43 H 0.154 0.846 44 H 0.153 0.847 45 H 0.154 0.846 46 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.976 0.440 -9.085 9.148 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.181 4.181 3 Si 0.698 3.302 4 C -0.173 4.173 5 C 0.080 3.920 6 O -0.228 6.228 7 C -0.042 4.042 8 C 0.301 3.699 9 O -0.448 6.448 10 N -0.346 5.346 11 C 0.007 3.993 12 H 0.101 0.899 13 C -0.160 4.160 14 C -0.082 4.082 15 H 0.140 0.860 16 C -0.051 4.051 17 C -0.116 4.116 18 C -0.072 4.072 19 Cl -0.031 7.031 20 C -0.080 4.080 21 Cl -0.034 7.034 22 C -0.118 4.118 23 C -0.117 4.117 24 C -0.182 4.182 25 C -0.232 4.232 26 C -0.094 4.094 27 C -0.172 4.172 28 C -0.096 4.096 29 H 0.240 0.760 30 H 0.097 0.903 31 H -0.232 1.232 32 H -0.209 1.209 33 H 0.141 0.859 34 H 0.140 0.860 35 H 0.260 0.740 36 H 0.123 0.877 37 H 0.112 0.888 38 H 0.176 0.824 39 H 0.172 0.828 40 H 0.176 0.824 41 H 0.089 0.911 42 H 0.119 0.881 43 H 0.171 0.829 44 H 0.171 0.829 45 H 0.172 0.828 46 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 1.250 0.994 -7.257 7.431 hybrid contribution 0.297 -1.676 0.442 1.759 sum 1.547 -0.682 -6.815 7.021 Atomic orbital electron populations 1.86543 1.17702 1.82180 1.50004 1.25166 0.85133 1.11100 0.96683 0.94049 0.77577 0.73917 0.84619 1.19852 1.07023 0.91578 0.98852 1.19104 0.94300 0.91185 0.87404 1.86186 1.78036 1.18731 1.39861 1.22706 1.04406 0.79947 0.97102 1.20534 0.78164 0.83001 0.88182 1.90785 1.50037 1.62581 1.41416 1.45324 1.63369 1.05354 1.20516 1.21877 0.96000 0.94705 0.86676 0.89885 1.23398 0.96136 0.91881 1.04567 1.21664 0.98860 0.89210 0.98475 0.86035 1.19908 0.96100 0.94496 0.94620 1.21170 0.99956 0.89657 1.00779 1.20987 1.02456 0.89715 0.93994 1.98405 1.84878 1.33818 1.86008 1.21036 1.04449 0.89928 0.92609 1.98403 1.97081 1.35950 1.71963 1.21293 0.98788 0.90112 1.01639 1.21383 0.98173 0.98481 0.93671 1.23594 1.00069 0.94745 0.99757 1.21588 1.05705 1.01810 0.94071 1.21411 0.95500 0.94339 0.98166 1.21453 1.01868 0.95044 0.98838 1.21113 0.96212 1.00149 0.92147 0.76008 0.90322 1.23223 1.20884 0.85916 0.86045 0.74023 0.87729 0.88780 0.82440 0.82761 0.82365 0.91137 0.88109 0.82851 0.82888 0.82832 0.82627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.43 12.88 -148.98 -1.92 -6.35 16 2 C -0.07 -0.47 2.38 71.23 0.17 -0.30 16 3 Si 0.79 0.97 29.92 68.60 2.05 3.02 16 4 C -0.17 -0.66 5.27 -19.77 -0.10 -0.76 16 5 C 0.13 0.54 6.66 22.51 0.15 0.69 16 6 O -0.32 -2.47 9.00 -73.38 -0.66 -3.13 16 7 C 0.04 -0.08 5.22 71.24 0.37 0.29 16 8 C 0.51 1.51 7.91 87.66 0.69 2.20 16 9 O -0.57 -8.85 16.10 15.97 0.26 -8.59 16 10 N -0.69 3.89 5.26 -440.02 -2.32 1.57 16 11 C 0.11 -0.50 4.32 45.52 0.20 -0.30 16 12 H 0.08 0.13 7.46 -2.38 -0.02 0.11 16 13 C -0.12 1.13 7.29 31.12 0.23 1.36 16 14 C -0.06 0.59 3.86 -11.02 -0.04 0.55 16 15 H 0.12 -1.54 8.09 -2.38 -0.02 -1.55 16 16 C -0.05 0.28 5.29 -19.87 -0.11 0.17 16 17 C -0.10 0.30 9.49 22.29 0.21 0.51 16 18 C -0.04 -0.07 6.32 22.34 0.14 0.08 16 19 Cl -0.06 -0.20 27.96 -2.72 -0.08 -0.27 16 20 C -0.05 -0.11 6.32 22.35 0.14 0.03 16 21 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 22 C -0.10 0.19 9.83 22.29 0.22 0.41 16 23 C -0.10 0.50 8.62 22.27 0.19 0.69 16 24 C -0.14 0.87 7.25 31.12 0.23 1.09 16 25 C -0.21 0.48 9.04 22.37 0.20 0.68 16 26 C -0.08 0.34 10.04 22.25 0.22 0.56 16 27 C -0.15 0.64 10.04 22.28 0.22 0.87 16 28 C -0.08 0.15 8.66 22.26 0.19 0.34 16 29 H 0.39 -0.79 8.70 -74.05 -0.64 -1.43 16 30 H 0.08 0.97 7.83 -2.39 -0.02 0.96 16 31 H -0.30 -2.81 7.11 99.48 0.71 -2.10 16 32 H -0.28 -1.45 7.11 99.48 0.71 -0.74 16 33 H 0.12 -1.04 7.66 -2.38 -0.02 -1.06 16 34 H 0.12 -1.04 7.66 -2.39 -0.02 -1.06 16 35 H 0.42 -5.68 8.70 -92.71 -0.81 -6.49 16 36 H 0.10 -0.97 7.73 -2.38 -0.02 -0.99 16 37 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 38 H 0.16 -1.09 8.05 -2.91 -0.02 -1.12 16 39 H 0.15 -0.73 8.06 -2.91 -0.02 -0.75 16 40 H 0.16 -1.43 6.64 -2.91 -0.02 -1.45 16 41 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.10 -0.66 6.30 -2.38 -0.02 -0.67 16 43 H 0.15 -1.30 6.30 -2.91 -0.02 -1.32 16 44 H 0.15 -1.48 8.06 -2.91 -0.02 -1.51 16 45 H 0.15 -1.41 8.06 -2.91 -0.02 -1.44 16 46 H 0.16 -1.13 5.13 -2.91 -0.01 -1.15 16 Total: 0.00 -30.51 413.84 0.44 -30.06 By element: Atomic # 1 Polarization: -24.79 SS G_CDS: -0.35 Total: -25.13 kcal Atomic # 6 Polarization: 5.64 SS G_CDS: 3.53 Total: 9.16 kcal Atomic # 7 Polarization: 3.89 SS G_CDS: -2.32 Total: 1.57 kcal Atomic # 8 Polarization: -15.75 SS G_CDS: -2.32 Total: -18.07 kcal Atomic # 14 Polarization: 0.97 SS G_CDS: 2.05 Total: 3.02 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -0.15 Total: -0.61 kcal Total: -30.51 0.44 -30.06 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.088 kcal (2) G-P(sol) polarization free energy of solvation -30.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.063 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.975 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds