Wall clock time and date at job start Mon Mar 8 2021 04:38:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50699 * 109.46972 * 119.99751 * 2 1 3 5 5 C 1.38268 * 119.94292 * 244.72777 * 4 2 1 6 6 C 1.38149 * 120.05340 * 179.72585 * 5 4 2 7 7 C 1.38731 * 119.94415 * 0.54416 * 6 5 4 8 8 O 1.35900 * 120.05787 * 179.74760 * 7 6 5 9 9 C 1.42901 * 116.99858 * 359.97438 * 8 7 6 10 10 C 1.50696 * 109.47334 * 180.02562 * 9 8 7 11 11 O 1.21284 * 119.99614 * 359.97438 * 10 9 8 12 12 N 1.34775 * 120.00320 * 180.02562 * 10 9 8 13 13 C 1.46503 * 120.00241 * 179.97438 * 12 10 9 14 14 H 1.08995 * 112.84678 * 334.67463 * 13 12 10 15 15 C 1.53784 * 113.61216 * 105.86278 * 13 12 10 16 16 C 1.54047 * 86.98239 * 89.16365 * 15 13 12 17 17 H 1.09006 * 113.68887 * 270.87318 * 16 15 13 18 18 C 1.50698 * 113.61989 * 139.98028 * 16 15 13 19 19 C 1.38212 * 119.97949 * 322.23209 * 18 16 15 20 20 C 1.38347 * 120.00052 * 179.72556 * 19 18 16 21 21 Cl 1.73592 * 120.01856 * 180.26932 * 20 19 18 22 22 C 1.38445 * 119.96038 * 0.54630 * 20 19 18 23 23 Cl 1.73599 * 120.02012 * 179.74670 * 22 20 19 24 24 C 1.38352 * 119.95945 * 359.72448 * 22 20 19 25 25 C 1.38201 * 120.00183 * 0.02562 * 24 22 20 26 26 C 1.53771 * 113.61426 * 203.47146 * 13 12 10 27 27 C 1.38739 * 119.88806 * 359.73421 * 7 6 5 28 28 C 1.38142 * 119.94183 * 359.97438 * 27 7 6 29 29 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 30 30 H 1.09000 * 109.47187 * 239.99852 * 2 1 3 31 31 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 32 32 H 1.48497 * 109.99780 * 181.31712 * 3 2 1 33 33 H 1.07997 * 119.97326 * 359.97438 * 5 4 2 34 34 H 1.08000 * 120.02598 * 180.27714 * 6 5 4 35 35 H 1.09003 * 109.47061 * 300.00137 * 9 8 7 36 36 H 1.08992 * 109.47297 * 59.99632 * 9 8 7 37 37 H 0.97000 * 119.99502 * 0.02562 * 12 10 9 38 38 H 1.08996 * 113.61393 * 203.66719 * 15 13 12 39 39 H 1.09004 * 113.61123 * 334.57031 * 15 13 12 40 40 H 1.07994 * 119.99581 * 359.97438 * 19 18 16 41 41 H 1.08001 * 119.99624 * 180.02562 * 24 22 20 42 42 H 1.08003 * 119.97557 * 179.97438 * 25 24 22 43 43 H 1.09001 * 113.62066 * 25.43763 * 26 13 12 44 44 H 1.08999 * 113.61426 * 156.34012 * 26 13 12 45 45 H 1.07999 * 120.02496 * 180.02562 * 27 7 6 46 46 H 1.07995 * 119.96818 * 179.97438 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6436 -0.0121 2.1880 6 6 3.1003 -0.6598 3.3196 7 6 2.8534 -2.0143 3.4894 8 8 3.3060 -2.6549 4.5993 9 6 4.0297 -1.8717 5.5505 10 6 4.4491 -2.7447 6.7050 11 8 4.1566 -3.9218 6.7126 12 7 5.1483 -2.2175 7.7294 13 6 5.5555 -3.0662 8.8520 14 1 4.9078 -3.9328 8.9841 15 6 7.0541 -3.4117 8.8511 16 6 7.2674 -2.1277 9.6751 17 1 7.4327 -1.2389 9.0661 18 6 8.2841 -2.2795 10.7770 19 6 8.3554 -3.4594 11.4933 20 6 9.2924 -3.6012 12.5012 21 17 9.3870 -5.0854 13.3964 22 6 10.1508 -2.5566 12.7993 23 17 11.3227 -2.7305 14.0681 24 6 10.0742 -1.3742 12.0850 25 6 9.1411 -1.2361 11.0750 26 6 5.8140 -2.2862 10.1518 27 6 2.1434 -2.7139 2.5244 28 6 1.6838 -2.0604 1.3975 29 1 -0.3933 0.4417 -0.7650 30 1 1.7924 -0.5139 -0.8900 31 1 1.5614 2.4679 1.2084 32 1 3.5345 1.7703 -0.0321 33 1 2.8397 1.0413 2.0532 34 1 3.6527 -0.1130 4.0694 35 1 4.9147 -1.4489 5.0749 36 1 3.3939 -1.0656 5.9164 37 1 5.3813 -1.2759 7.7238 38 1 7.2919 -4.3250 9.3963 39 1 7.5093 -3.3777 7.8612 40 1 7.6823 -4.2720 11.2634 41 1 10.7438 -0.5591 12.3167 42 1 9.0814 -0.3128 10.5179 43 1 5.2688 -1.3442 10.2116 44 1 5.7135 -2.8924 11.0521 45 1 1.9496 -3.7684 2.6545 46 1 1.1314 -2.6046 0.6458 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9750034_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:36 Heat of formation + Delta-G solvation = -28.925217 kcal Electronic energy + Delta-G solvation = -31270.124354 eV Core-core repulsion = 26565.491293 eV Total energy + Delta-G solvation = -4704.633061 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.073 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -41.93950 -41.40065 -40.50934 -39.40090 -38.70473 -37.56190 -37.47673 -37.20266 -34.75714 -32.55259 -32.08959 -31.96184 -31.80933 -29.68394 -26.99160 -26.51773 -26.07439 -24.34867 -24.04243 -22.97077 -22.40083 -21.83757 -20.48077 -19.58675 -18.80542 -18.45296 -18.26271 -17.57594 -17.47556 -17.20995 -16.82375 -16.79509 -16.69463 -15.97709 -15.71894 -15.65970 -15.50749 -15.28319 -15.22101 -15.01914 -14.71269 -14.50250 -14.13225 -14.00301 -13.86735 -13.81475 -13.68544 -13.52533 -13.42962 -13.04937 -12.90884 -12.55694 -12.49458 -12.42419 -12.20974 -12.10377 -11.97306 -11.88811 -11.86158 -11.77930 -11.49818 -11.00963 -10.34372 -10.31693 -10.09473 -10.08991 -9.69930 -9.25908 -5.02107 -0.23045 -0.08157 0.22926 0.25179 0.78706 1.15325 1.24080 1.30963 1.36416 1.58437 1.91056 2.21087 2.42916 2.58029 3.15305 3.30312 3.33962 3.38975 3.43966 3.47156 3.60747 3.64196 3.72892 3.77107 3.81216 3.82703 3.87258 3.91029 4.04205 4.13360 4.18796 4.32045 4.36524 4.41878 4.46782 4.54298 4.58122 4.60908 4.65961 4.75048 4.80492 4.82274 4.88091 4.91185 5.10116 5.18240 5.19322 5.33893 5.41656 5.46174 5.61732 6.12585 6.27395 6.60218 6.97585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.067 4.067 3 Si 0.682 3.318 4 C -0.112 4.112 5 C -0.082 4.082 6 C -0.205 4.205 7 C 0.134 3.866 8 O -0.287 6.287 9 C 0.040 3.960 10 C 0.519 3.481 11 O -0.507 6.507 12 N -0.711 5.711 13 C 0.121 3.879 14 H 0.109 0.891 15 C -0.145 4.145 16 C -0.075 4.075 17 H 0.104 0.896 18 C -0.055 4.055 19 C -0.098 4.098 20 C -0.028 4.028 21 Cl -0.045 7.045 22 C -0.036 4.036 23 Cl -0.047 7.047 24 C -0.095 4.095 25 C -0.099 4.099 26 C -0.134 4.134 27 C -0.143 4.143 28 C -0.048 4.048 29 H 0.382 0.618 30 H 0.074 0.926 31 H -0.252 1.252 32 H -0.256 1.256 33 H 0.121 0.879 34 H 0.131 0.869 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.403 0.597 38 H 0.098 0.902 39 H 0.079 0.921 40 H 0.144 0.856 41 H 0.144 0.856 42 H 0.138 0.862 43 H 0.081 0.919 44 H 0.102 0.898 45 H 0.139 0.861 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.081 7.005 -3.855 7.996 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.178 4.178 3 Si 0.583 3.417 4 C -0.112 4.112 5 C -0.100 4.100 6 C -0.223 4.223 7 C 0.089 3.911 8 O -0.199 6.199 9 C -0.039 4.039 10 C 0.304 3.696 11 O -0.380 6.380 12 N -0.365 5.365 13 C 0.016 3.984 14 H 0.127 0.873 15 C -0.183 4.183 16 C -0.093 4.093 17 H 0.122 0.878 18 C -0.056 4.056 19 C -0.116 4.116 20 C -0.055 4.055 21 Cl -0.016 7.016 22 C -0.063 4.063 23 Cl -0.018 7.018 24 C -0.114 4.114 25 C -0.118 4.118 26 C -0.172 4.172 27 C -0.161 4.161 28 C -0.066 4.066 29 H 0.229 0.771 30 H 0.092 0.908 31 H -0.176 1.176 32 H -0.180 1.180 33 H 0.138 0.862 34 H 0.149 0.851 35 H 0.113 0.887 36 H 0.113 0.887 37 H 0.238 0.762 38 H 0.116 0.884 39 H 0.097 0.903 40 H 0.161 0.839 41 H 0.162 0.838 42 H 0.156 0.844 43 H 0.100 0.900 44 H 0.120 0.880 45 H 0.157 0.843 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 0.524 6.045 -2.620 6.609 hybrid contribution 0.560 0.134 0.511 0.770 sum 1.084 6.179 -2.110 6.618 Atomic orbital electron populations 1.86502 1.17277 1.81795 1.49663 1.24612 0.85664 1.10143 0.97347 0.95293 0.80703 0.78300 0.87394 1.19262 1.01332 0.94466 0.96131 1.20665 0.97382 0.98658 0.93263 1.21106 1.06962 0.93794 1.00459 1.19036 0.94500 0.90842 0.86771 1.86172 1.68534 1.36472 1.28711 1.22462 0.97935 0.94038 0.89492 1.20018 0.78107 0.88486 0.82985 1.90799 1.53206 1.16153 1.77867 1.45470 1.57063 1.13221 1.20753 1.21858 0.96250 0.94809 0.85452 0.87317 1.23647 0.95996 0.97546 1.01116 1.21712 0.92946 0.99876 0.94781 0.87779 1.19721 0.96482 0.92983 0.96370 1.20906 0.97800 0.98696 0.94227 1.20797 0.98624 0.88829 0.97264 1.98419 1.97627 1.31788 1.73763 1.20857 0.94986 0.95280 0.95224 1.98416 1.56309 1.97721 1.49318 1.21094 0.99258 0.95910 0.95140 1.21141 0.94498 0.99126 0.96998 1.23442 0.94644 1.01689 0.97464 1.20547 1.01034 1.01155 0.93404 1.20856 0.96021 0.93333 0.96368 0.77060 0.90826 1.17648 1.18045 0.86163 0.85097 0.88700 0.88656 0.76248 0.88371 0.90275 0.83867 0.83850 0.84390 0.90038 0.87996 0.84346 0.84543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.05 12.81 -35.23 -0.45 -0.50 16 2 C -0.07 0.02 2.79 36.01 0.10 0.12 16 3 Si 0.68 -0.95 29.84 -169.99 -5.07 -6.02 16 4 C -0.11 -0.24 5.39 -104.60 -0.56 -0.80 16 5 C -0.08 -0.16 8.66 -39.60 -0.34 -0.50 16 6 C -0.20 -0.24 9.04 -39.43 -0.36 -0.59 16 7 C 0.13 0.34 6.69 -39.21 -0.26 0.08 16 8 O -0.29 -0.87 9.67 -39.34 -0.38 -1.25 16 9 C 0.04 -0.04 5.22 36.00 0.19 0.15 16 10 C 0.52 0.40 7.91 -10.99 -0.09 0.31 16 11 O -0.51 -2.97 16.12 -14.36 -0.23 -3.21 16 12 N -0.71 1.94 5.26 -53.02 -0.28 1.66 16 13 C 0.12 -0.27 4.30 -67.12 -0.29 -0.56 16 14 H 0.11 -0.02 7.50 -51.93 -0.39 -0.41 16 15 C -0.14 0.38 7.27 -25.78 -0.19 0.20 16 16 C -0.07 0.29 3.87 -90.82 -0.35 -0.06 16 17 H 0.10 -0.55 8.09 -51.93 -0.42 -0.97 16 18 C -0.06 0.12 5.29 -104.62 -0.55 -0.43 16 19 C -0.10 0.10 8.38 -39.55 -0.33 -0.24 16 20 C -0.03 -0.02 6.32 -39.47 -0.25 -0.27 16 21 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 22 C -0.04 -0.03 6.32 -39.46 -0.25 -0.28 16 23 Cl -0.05 -0.07 27.96 -51.86 -1.45 -1.52 16 24 C -0.10 0.10 9.83 -39.55 -0.39 -0.29 16 25 C -0.10 0.23 9.71 -39.59 -0.38 -0.16 16 26 C -0.13 0.52 7.29 -25.93 -0.19 0.33 16 27 C -0.14 -0.35 9.99 -39.43 -0.39 -0.75 16 28 C -0.05 -0.09 9.68 -39.61 -0.38 -0.48 16 29 H 0.38 -1.89 8.74 45.56 0.40 -1.50 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H -0.25 -0.41 7.05 56.52 0.40 -0.02 16 32 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 33 H 0.12 0.13 4.86 -52.49 -0.26 -0.13 16 34 H 0.13 -0.24 6.30 -52.49 -0.33 -0.57 16 35 H 0.10 -0.34 7.66 -51.93 -0.40 -0.74 16 36 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 37 H 0.40 -2.39 8.70 -40.82 -0.36 -2.74 16 38 H 0.10 -0.26 6.33 -51.93 -0.33 -0.58 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.14 -0.32 6.67 -52.49 -0.35 -0.67 16 41 H 0.14 -0.37 8.06 -52.49 -0.42 -0.79 16 42 H 0.14 -0.63 8.05 -52.48 -0.42 -1.05 16 43 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 44 H 0.10 -0.37 7.71 -51.93 -0.40 -0.78 16 45 H 0.14 0.22 8.06 -52.49 -0.42 -0.21 16 46 H 0.14 0.06 8.06 -52.49 -0.42 -0.37 16 LS Contribution 414.43 15.07 6.25 6.25 Total: 0.00 -10.61 414.43 -13.72 -24.33 By element: Atomic # 1 Polarization: -8.62 SS G_CDS: -5.38 Total: -14.00 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -5.27 Total: -4.22 kcal Atomic # 7 Polarization: 1.94 SS G_CDS: -0.28 Total: 1.66 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -1.06 Total: -4.95 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.07 Total: -6.02 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -2.90 Total: -3.04 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -10.61 -13.72 -24.33 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.598 kcal (2) G-P(sol) polarization free energy of solvation -10.606 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.204 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.327 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.925 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds