Wall clock time and date at job start Mon Mar 8 2021 04:38:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50699 * 109.46972 * 119.99751 * 2 1 3 5 5 C 1.38268 * 119.94292 * 244.72777 * 4 2 1 6 6 C 1.38149 * 120.05340 * 179.72585 * 5 4 2 7 7 C 1.38731 * 119.94415 * 0.54416 * 6 5 4 8 8 O 1.35900 * 120.05787 * 179.74760 * 7 6 5 9 9 C 1.42901 * 116.99858 * 359.97438 * 8 7 6 10 10 C 1.50696 * 109.47334 * 180.02562 * 9 8 7 11 11 O 1.21284 * 119.99614 * 359.97438 * 10 9 8 12 12 N 1.34775 * 120.00320 * 180.02562 * 10 9 8 13 13 C 1.46503 * 120.00241 * 179.97438 * 12 10 9 14 14 H 1.08995 * 112.84678 * 334.67463 * 13 12 10 15 15 C 1.53784 * 113.61216 * 105.86278 * 13 12 10 16 16 C 1.54047 * 86.98239 * 89.16365 * 15 13 12 17 17 H 1.09006 * 113.68887 * 270.87318 * 16 15 13 18 18 C 1.50698 * 113.61989 * 139.98028 * 16 15 13 19 19 C 1.38212 * 119.97949 * 322.23209 * 18 16 15 20 20 C 1.38347 * 120.00052 * 179.72556 * 19 18 16 21 21 Cl 1.73592 * 120.01856 * 180.26932 * 20 19 18 22 22 C 1.38445 * 119.96038 * 0.54630 * 20 19 18 23 23 Cl 1.73599 * 120.02012 * 179.74670 * 22 20 19 24 24 C 1.38352 * 119.95945 * 359.72448 * 22 20 19 25 25 C 1.38201 * 120.00183 * 0.02562 * 24 22 20 26 26 C 1.53771 * 113.61426 * 203.47146 * 13 12 10 27 27 C 1.38739 * 119.88806 * 359.73421 * 7 6 5 28 28 C 1.38142 * 119.94183 * 359.97438 * 27 7 6 29 29 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 30 30 H 1.09000 * 109.47187 * 239.99852 * 2 1 3 31 31 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 32 32 H 1.48497 * 109.99780 * 181.31712 * 3 2 1 33 33 H 1.07997 * 119.97326 * 359.97438 * 5 4 2 34 34 H 1.08000 * 120.02598 * 180.27714 * 6 5 4 35 35 H 1.09003 * 109.47061 * 300.00137 * 9 8 7 36 36 H 1.08992 * 109.47297 * 59.99632 * 9 8 7 37 37 H 0.97000 * 119.99502 * 0.02562 * 12 10 9 38 38 H 1.08996 * 113.61393 * 203.66719 * 15 13 12 39 39 H 1.09004 * 113.61123 * 334.57031 * 15 13 12 40 40 H 1.07994 * 119.99581 * 359.97438 * 19 18 16 41 41 H 1.08001 * 119.99624 * 180.02562 * 24 22 20 42 42 H 1.08003 * 119.97557 * 179.97438 * 25 24 22 43 43 H 1.09001 * 113.62066 * 25.43763 * 26 13 12 44 44 H 1.08999 * 113.61426 * 156.34012 * 26 13 12 45 45 H 1.07999 * 120.02496 * 180.02562 * 27 7 6 46 46 H 1.07995 * 119.96818 * 179.97438 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6436 -0.0121 2.1880 6 6 3.1003 -0.6598 3.3196 7 6 2.8534 -2.0143 3.4894 8 8 3.3060 -2.6549 4.5993 9 6 4.0297 -1.8717 5.5505 10 6 4.4491 -2.7447 6.7050 11 8 4.1566 -3.9218 6.7126 12 7 5.1483 -2.2175 7.7294 13 6 5.5555 -3.0662 8.8520 14 1 4.9078 -3.9328 8.9841 15 6 7.0541 -3.4117 8.8511 16 6 7.2674 -2.1277 9.6751 17 1 7.4327 -1.2389 9.0661 18 6 8.2841 -2.2795 10.7770 19 6 8.3554 -3.4594 11.4933 20 6 9.2924 -3.6012 12.5012 21 17 9.3870 -5.0854 13.3964 22 6 10.1508 -2.5566 12.7993 23 17 11.3227 -2.7305 14.0681 24 6 10.0742 -1.3742 12.0850 25 6 9.1411 -1.2361 11.0750 26 6 5.8140 -2.2862 10.1518 27 6 2.1434 -2.7139 2.5244 28 6 1.6838 -2.0604 1.3975 29 1 -0.3933 0.4417 -0.7650 30 1 1.7924 -0.5139 -0.8900 31 1 1.5614 2.4679 1.2084 32 1 3.5345 1.7703 -0.0321 33 1 2.8397 1.0413 2.0532 34 1 3.6527 -0.1130 4.0694 35 1 4.9147 -1.4489 5.0749 36 1 3.3939 -1.0656 5.9164 37 1 5.3813 -1.2759 7.7238 38 1 7.2919 -4.3250 9.3963 39 1 7.5093 -3.3777 7.8612 40 1 7.6823 -4.2720 11.2634 41 1 10.7438 -0.5591 12.3167 42 1 9.0814 -0.3128 10.5179 43 1 5.2688 -1.3442 10.2116 44 1 5.7135 -2.8924 11.0521 45 1 1.9496 -3.7684 2.6545 46 1 1.1314 -2.6046 0.6458 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9750034_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:38:34 Heat of formation + Delta-G solvation = -26.576322 kcal Electronic energy + Delta-G solvation = -31270.022498 eV Core-core repulsion = 26565.491293 eV Total energy + Delta-G solvation = -4704.531205 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.073 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -41.86269 -41.38371 -40.50176 -39.35422 -38.72850 -37.59465 -37.47435 -37.17773 -34.72772 -32.59176 -31.98976 -31.95522 -31.76514 -29.61949 -26.75235 -26.42893 -26.00451 -24.32152 -24.00582 -22.87658 -22.40199 -21.82823 -20.31642 -19.60848 -18.72493 -18.39082 -18.22039 -17.54164 -17.45495 -17.12035 -16.80127 -16.72570 -16.61213 -15.91863 -15.76919 -15.61267 -15.47912 -15.25989 -15.19611 -14.92615 -14.58136 -14.50371 -14.13354 -13.94741 -13.85978 -13.63212 -13.59628 -13.47859 -13.44025 -12.97128 -12.93350 -12.51733 -12.45308 -12.31640 -12.21655 -12.07166 -12.02434 -11.87709 -11.84668 -11.62048 -11.30234 -11.09483 -10.27161 -10.22831 -10.17532 -10.00452 -9.62683 -9.33677 -4.91092 -0.14379 0.03235 0.12260 0.17675 0.77847 1.17863 1.33228 1.35825 1.37706 1.66681 1.97504 2.33409 2.48791 2.51211 3.37445 3.37971 3.49227 3.54445 3.59768 3.60890 3.65267 3.74794 3.86465 3.91563 3.97887 4.01388 4.03576 4.08997 4.14677 4.23007 4.24905 4.31463 4.41244 4.56058 4.59858 4.69394 4.74287 4.79072 4.81657 4.84746 4.94682 4.98939 5.01842 5.03904 5.09291 5.11106 5.34609 5.37392 5.51744 5.56718 5.59598 6.14987 6.39445 6.93538 7.06773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.078 4.078 3 Si 0.773 3.227 4 C -0.129 4.129 5 C -0.098 4.098 6 C -0.201 4.201 7 C 0.122 3.878 8 O -0.315 6.315 9 C 0.034 3.966 10 C 0.517 3.483 11 O -0.570 6.570 12 N -0.690 5.690 13 C 0.114 3.886 14 H 0.081 0.919 15 C -0.146 4.146 16 C -0.062 4.062 17 H 0.131 0.869 18 C -0.052 4.052 19 C -0.103 4.103 20 C -0.045 4.045 21 Cl -0.063 7.063 22 C -0.053 4.053 23 Cl -0.063 7.063 24 C -0.100 4.100 25 C -0.092 4.092 26 C -0.124 4.124 27 C -0.160 4.160 28 C -0.056 4.056 29 H 0.402 0.598 30 H 0.091 0.909 31 H -0.294 1.294 32 H -0.286 1.286 33 H 0.126 0.874 34 H 0.162 0.838 35 H 0.126 0.874 36 H 0.124 0.876 37 H 0.423 0.577 38 H 0.092 0.908 39 H 0.073 0.927 40 H 0.149 0.851 41 H 0.158 0.842 42 H 0.170 0.830 43 H 0.098 0.902 44 H 0.098 0.902 45 H 0.136 0.864 46 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.174 9.764 -4.848 10.903 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.188 4.188 3 Si 0.679 3.321 4 C -0.130 4.130 5 C -0.116 4.116 6 C -0.219 4.219 7 C 0.077 3.923 8 O -0.229 6.229 9 C -0.043 4.043 10 C 0.303 3.697 11 O -0.448 6.448 12 N -0.344 5.344 13 C 0.009 3.991 14 H 0.100 0.900 15 C -0.185 4.185 16 C -0.080 4.080 17 H 0.149 0.851 18 C -0.053 4.053 19 C -0.121 4.121 20 C -0.072 4.072 21 Cl -0.034 7.034 22 C -0.080 4.080 23 Cl -0.034 7.034 24 C -0.119 4.119 25 C -0.110 4.110 26 C -0.161 4.161 27 C -0.179 4.179 28 C -0.074 4.074 29 H 0.254 0.746 30 H 0.109 0.891 31 H -0.221 1.221 32 H -0.213 1.213 33 H 0.144 0.856 34 H 0.180 0.820 35 H 0.144 0.856 36 H 0.142 0.858 37 H 0.261 0.739 38 H 0.111 0.889 39 H 0.092 0.908 40 H 0.166 0.834 41 H 0.175 0.825 42 H 0.187 0.813 43 H 0.116 0.884 44 H 0.117 0.883 45 H 0.154 0.846 46 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 0.620 8.844 -3.625 9.578 hybrid contribution 0.517 -0.700 0.828 1.202 sum 1.138 8.143 -2.797 8.685 Atomic orbital electron populations 1.86449 1.17413 1.82424 1.51317 1.24822 0.85750 1.11160 0.97026 0.94281 0.77430 0.75489 0.84946 1.19675 1.01351 0.94758 0.97186 1.20897 0.97832 0.99078 0.93770 1.21404 1.06398 0.93289 1.00793 1.19149 0.94882 0.91476 0.86792 1.86133 1.69214 1.38133 1.29375 1.22764 0.99418 0.93716 0.88435 1.20456 0.77581 0.87876 0.83786 1.90776 1.55942 1.18816 1.79271 1.45307 1.55495 1.14094 1.19514 1.21856 0.95991 0.94718 0.86566 0.90033 1.23631 0.95451 0.98324 1.01062 1.21744 0.92227 0.99960 0.94047 0.85134 1.19924 0.96661 0.92442 0.96259 1.21070 0.97507 0.99621 0.93940 1.20954 0.99753 0.88408 0.98110 1.98405 1.97752 1.32932 1.74333 1.21055 0.95172 0.96210 0.95597 1.98403 1.56993 1.97828 1.50218 1.21358 0.99822 0.95535 0.95141 1.21501 0.93204 1.00029 0.96235 1.23382 0.94656 1.01964 0.96133 1.20730 1.01684 1.01397 0.94096 1.21011 0.96270 0.93655 0.96505 0.74650 0.89095 1.22141 1.21330 0.85642 0.82007 0.85640 0.85806 0.73883 0.88921 0.90848 0.83362 0.82475 0.81305 0.88388 0.88342 0.84575 0.83654 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.26 12.81 -148.98 -1.91 -1.65 16 2 C -0.08 0.08 2.79 71.24 0.20 0.28 16 3 Si 0.77 -2.63 29.84 68.60 2.05 -0.58 16 4 C -0.13 -0.56 5.39 -19.85 -0.11 -0.67 16 5 C -0.10 -0.35 8.66 22.26 0.19 -0.16 16 6 C -0.20 -0.30 9.04 22.37 0.20 -0.10 16 7 C 0.12 0.67 6.69 22.51 0.15 0.82 16 8 O -0.32 -2.09 9.67 -73.38 -0.71 -2.80 16 9 C 0.03 -0.11 5.22 71.23 0.37 0.26 16 10 C 0.52 0.83 7.91 87.66 0.69 1.52 16 11 O -0.57 -7.81 16.12 16.00 0.26 -7.56 16 12 N -0.69 4.54 5.26 -440.05 -2.32 2.22 16 13 C 0.11 -0.53 4.30 45.51 0.20 -0.33 16 14 H 0.08 0.12 7.50 -2.39 -0.02 0.10 16 15 C -0.15 0.83 7.27 31.21 0.23 1.06 16 16 C -0.06 0.61 3.87 -10.92 -0.04 0.57 16 17 H 0.13 -1.92 8.09 -2.38 -0.02 -1.94 16 18 C -0.05 0.31 5.29 -19.87 -0.11 0.21 16 19 C -0.10 0.21 8.38 22.29 0.19 0.39 16 20 C -0.04 -0.10 6.32 22.35 0.14 0.04 16 21 Cl -0.06 -0.29 27.96 -2.72 -0.08 -0.37 16 22 C -0.05 -0.10 6.32 22.35 0.14 0.05 16 23 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.33 16 24 C -0.10 0.32 9.83 22.29 0.22 0.54 16 25 C -0.09 0.64 9.71 22.27 0.22 0.86 16 26 C -0.12 1.15 7.29 31.12 0.23 1.38 16 27 C -0.16 -1.01 9.99 22.37 0.22 -0.78 16 28 C -0.06 -0.27 9.68 22.25 0.22 -0.05 16 29 H 0.40 -4.44 8.74 -74.06 -0.65 -5.08 16 30 H 0.09 -0.44 7.96 -2.39 -0.02 -0.46 16 31 H -0.29 -1.01 7.05 99.48 0.70 -0.31 16 32 H -0.29 -0.44 7.11 99.48 0.71 0.27 16 33 H 0.13 0.22 4.86 -2.91 -0.01 0.21 16 34 H 0.16 -0.99 6.30 -2.91 -0.02 -1.00 16 35 H 0.13 -1.21 7.66 -2.39 -0.02 -1.22 16 36 H 0.12 -1.13 7.66 -2.39 -0.02 -1.15 16 37 H 0.42 -6.20 8.70 -92.71 -0.81 -7.01 16 38 H 0.09 -0.42 6.33 -2.39 -0.02 -0.43 16 39 H 0.07 -0.30 8.14 -2.38 -0.02 -0.32 16 40 H 0.15 -0.56 6.67 -2.91 -0.02 -0.58 16 41 H 0.16 -1.02 8.06 -2.91 -0.02 -1.04 16 42 H 0.17 -2.23 8.05 -2.91 -0.02 -2.26 16 43 H 0.10 -1.18 8.14 -2.39 -0.02 -1.19 16 44 H 0.10 -0.79 7.71 -2.39 -0.02 -0.81 16 45 H 0.14 0.73 8.06 -2.91 -0.02 0.71 16 46 H 0.15 0.24 8.06 -2.91 -0.02 0.21 16 Total: 0.00 -28.92 414.43 0.41 -28.51 By element: Atomic # 1 Polarization: -22.96 SS G_CDS: -0.36 Total: -23.32 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: 3.55 Total: 5.88 kcal Atomic # 7 Polarization: 4.54 SS G_CDS: -2.32 Total: 2.22 kcal Atomic # 8 Polarization: -9.64 SS G_CDS: -2.36 Total: -12.00 kcal Atomic # 14 Polarization: -2.63 SS G_CDS: 2.05 Total: -0.58 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -0.15 Total: -0.70 kcal Total: -28.92 0.41 -28.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9750034_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.934 kcal (2) G-P(sol) polarization free energy of solvation -28.919 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.985 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds